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The map label for this gene is mcpB [H]

Identifier: 83590859

GI number: 83590859

Start: 2118680

End: 2120338

Strand: Reverse

Name: mcpB [H]

Synonym: Moth_2029

Alternate gene names: 83590859

Gene position: 2120338-2118680 (Counterclockwise)

Preceding gene: 83590860

Following gene: 83590858

Centisome position: 80.66

GC content: 58.29

Gene sequence:

>1659_bases
ATGGTACTCAAGTGGCAAACCAAACTTCTGTATTTTATCCTCCTACTACTCCTGGCTCTGGCGCCGGGTACTGTGGGAAC
GGCCCTGGTGGCCATCCAGGGTATTAGCTGGCAAATTCTCCTTTTGCCGGCTGTCGTCGCCGGTGCCCTGGGGCTGATTT
TAAGCCTGGGTATCCTCCTTAACCTGTACATAAAGTGGATGCGGCCCCTGCACCGGGTCCTGCAGTTCCTTAATTTACTG
GGCAAAGGCGACCCGGTCCAGGCCGAGAAGTCTTTACAGAACGCGCGACTGGGGGAGAGCTTCCAGGGGCCGGTAACTGC
CGTCCTGGACAGTTTTTACCGCCTGGTGGGTCGCTTACAATTAACTGCCGATGAGCTGGCCCATTTTTCCCGTAACCTCG
AGGAGAGTTCCAGTACCACTTCCCGTAACCTGGAGGAAGTAACGGCAGCCATCCAGGGGATTACCAGCGGAGCCGATGAA
CAGGCCGGTGCAGCCCAGCGGGTAGCGGAGAATATCAATGTTTTACATAATTTAGCAGAAGATATTAACGATCGGGCCGC
CCTGGGGATGGAGATGGGGGAGGAAGTCAATAGGAAAGAAAAGGAAGGTCGGGACCTCCTGGAGCATTTGCTCCAAGAGA
TAAAGGCCGGGGCCTCCTCCATCCAGGAAGCTGCCGGGCGGATGCGGCAGCTGGAAGCCAAAATGGACCAGATCAACACC
CTGGTCCAGGCAGTAACGGAGATCGCCGACCAGACCAACCTCCTGGCCCTGAATGCCGCCATTGAAGCCGCCCGCGCCGG
TGAGCAGGGTCGAGGTTTTGCTGTGGTGGCCGAAGAGGTGCGCAAGCTCGCAGAACAGTCGGCGGCAGCCGCCCAGGATA
TAACCTCCCTGGCTGCCTCCATTGGCGATGAAGCGCGCCAGACGGCAGCCCAGGTGGATAAGAATGTGGAATTGGTCCAG
AGCAACATCCAGCGCGGCGCCCAGGTGCGGGAGAACTTTAGCGTTGTCAGTGAGGCGATAAAAAAAGCCGCCGAAGTCAT
GACCAATATCAGTCACCAGGCCCAGAACCAGCTGACCAGGGTAAAGGAAGTCGGCGAGGCCGCCGGCCGTATGGCCGCCG
TGGCTCAGGAGACTGCCGCCAGCATTGAAGAAGTAGCGGCGGCTACCGAAGAGCATAAGTCCACCATGGCCGTAGTGGAG
GAGCATACGCGCCAGTTTACGGATATGGCGCGGAATTTCTTTACCATGGTCGCCTCCTTTACCAGGGACGGCTGGGATGA
GGACCTGCGCCGGGAACTCATTCGCCAGGGACAGGAGGTGCTGGCAAGGCTGGCCGCCGACCCGGGAGTTAAAAAAATGG
AGGCGACAACCCTGGCACCCATCCTGGATGACACCTTCAGTAAATCACCTTTTATCCAGACATTGATTGCCGCCCTGCCT
GATGGTACGGCTATCTATAACCGGCCGGAGTCGACTATAACAAACTGGGCCTTCCGGCCATGGTTTCAGGCGGCTGTCAG
GGGTGAAAACTACGCTAGCGAGCCCTACGTGACCCAGTGCACCAACCGGGTGGCCGTTACCATCTCTGTACCCATTTTCG
GTGATGAAGGCCGCATCGCCGGGGTCCTGGCGGCCAACATAGCCCCGGCGCGGAGATAA

Upstream 100 bases:

>100_bases
TACCGGCAGGGAACGCCAGTTACGGAACTTATAGATTTTTTCCTGGTGAAAGTTGAATATTTGTGTTAATATAGAGAAAA
ATGCCCGGGGGTGGGGGATC

Downstream 100 bases:

>100_bases
TCTTCCGGCAACACAGTACGGTAGGTGCCGTTCTCGCCCCCCTGAGGGGGCTTTTTTTATCGCCCATGGCTGCTGGGCCT
AAGGGCGGCAGCGAAAATTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MVLKWQTKLLYFILLLLLALAPGTVGTALVAIQGISWQILLLPAVVAGALGLILSLGILLNLYIKWMRPLHRVLQFLNLL
GKGDPVQAEKSLQNARLGESFQGPVTAVLDSFYRLVGRLQLTADELAHFSRNLEESSSTTSRNLEEVTAAIQGITSGADE
QAGAAQRVAENINVLHNLAEDINDRAALGMEMGEEVNRKEKEGRDLLEHLLQEIKAGASSIQEAAGRMRQLEAKMDQINT
LVQAVTEIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAAAAQDITSLAASIGDEARQTAAQVDKNVELVQ
SNIQRGAQVRENFSVVSEAIKKAAEVMTNISHQAQNQLTRVKEVGEAAGRMAAVAQETAASIEEVAAATEEHKSTMAVVE
EHTRQFTDMARNFFTMVASFTRDGWDEDLRRELIRQGQEVLARLAADPGVKKMEATTLAPILDDTFSKSPFIQTLIAALP
DGTAIYNRPESTITNWAFRPWFQAAVRGENYASEPYVTQCTNRVAVTISVPIFGDEGRIAGVLAANIAPARR

Sequences:

>Translated_552_residues
MVLKWQTKLLYFILLLLLALAPGTVGTALVAIQGISWQILLLPAVVAGALGLILSLGILLNLYIKWMRPLHRVLQFLNLL
GKGDPVQAEKSLQNARLGESFQGPVTAVLDSFYRLVGRLQLTADELAHFSRNLEESSSTTSRNLEEVTAAIQGITSGADE
QAGAAQRVAENINVLHNLAEDINDRAALGMEMGEEVNRKEKEGRDLLEHLLQEIKAGASSIQEAAGRMRQLEAKMDQINT
LVQAVTEIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAAAAQDITSLAASIGDEARQTAAQVDKNVELVQ
SNIQRGAQVRENFSVVSEAIKKAAEVMTNISHQAQNQLTRVKEVGEAAGRMAAVAQETAASIEEVAAATEEHKSTMAVVE
EHTRQFTDMARNFFTMVASFTRDGWDEDLRRELIRQGQEVLARLAADPGVKKMEATTLAPILDDTFSKSPFIQTLIAALP
DGTAIYNRPESTITNWAFRPWFQAAVRGENYASEPYVTQCTNRVAVTISVPIFGDEGRIAGVLAANIAPARR
>Mature_552_residues
MVLKWQTKLLYFILLLLLALAPGTVGTALVAIQGISWQILLLPAVVAGALGLILSLGILLNLYIKWMRPLHRVLQFLNLL
GKGDPVQAEKSLQNARLGESFQGPVTAVLDSFYRLVGRLQLTADELAHFSRNLEESSSTTSRNLEEVTAAIQGITSGADE
QAGAAQRVAENINVLHNLAEDINDRAALGMEMGEEVNRKEKEGRDLLEHLLQEIKAGASSIQEAAGRMRQLEAKMDQINT
LVQAVTEIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAAAAQDITSLAASIGDEARQTAAQVDKNVELVQ
SNIQRGAQVRENFSVVSEAIKKAAEVMTNISHQAQNQLTRVKEVGEAAGRMAAVAQETAASIEEVAAATEEHKSTMAVVE
EHTRQFTDMARNFFTMVASFTRDGWDEDLRRELIRQGQEVLARLAADPGVKKMEATTLAPILDDTFSKSPFIQTLIAALP
DGTAIYNRPESTITNWAFRPWFQAAVRGENYASEPYVTQCTNRVAVTISVPIFGDEGRIAGVLAANIAPARR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=339, Percent_Identity=26.5486725663717, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI2367378, Length=341, Percent_Identity=26.6862170087977, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI1788194, Length=216, Percent_Identity=32.4074074074074, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1789453, Length=170, Percent_Identity=34.7058823529412, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1788195, Length=265, Percent_Identity=28.3018867924528, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59925; Mature: 59925

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKWQTKLLYFILLLLLALAPGTVGTALVAIQGISWQILLLPAVVAGALGLILSLGILL
CCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NLYIKWMRPLHRVLQFLNLLGKGDPVQAEKSLQNARLGESFQGPVTAVLDSFYRLVGRLQ
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTADELAHFSRNLEESSSTTSRNLEEVTAAIQGITSGADEQAGAAQRVAENINVLHNLAE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DINDRAALGMEMGEEVNRKEKEGRDLLEHLLQEIKAGASSIQEAAGRMRQLEAKMDQINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQAVTEIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAAAAQDITSLAAS
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGDEARQTAAQVDKNVELVQSNIQRGAQVRENFSVVSEAIKKAAEVMTNISHQAQNQLTR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKEVGEAAGRMAAVAQETAASIEEVAAATEEHKSTMAVVEEHTRQFTDMARNFFTMVASF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRDGWDEDLRRELIRQGQEVLARLAADPGVKKMEATTLAPILDDTFSKSPFIQTLIAALP
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DGTAIYNRPESTITNWAFRPWFQAAVRGENYASEPYVTQCTNRVAVTISVPIFGDEGRIA
CCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCH
GVLAANIAPARR
HHHHHCCCCCCC
>Mature Secondary Structure
MVLKWQTKLLYFILLLLLALAPGTVGTALVAIQGISWQILLLPAVVAGALGLILSLGILL
CCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NLYIKWMRPLHRVLQFLNLLGKGDPVQAEKSLQNARLGESFQGPVTAVLDSFYRLVGRLQ
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTADELAHFSRNLEESSSTTSRNLEEVTAAIQGITSGADEQAGAAQRVAENINVLHNLAE
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
DINDRAALGMEMGEEVNRKEKEGRDLLEHLLQEIKAGASSIQEAAGRMRQLEAKMDQINT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQAVTEIADQTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSAAAAQDITSLAAS
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGDEARQTAAQVDKNVELVQSNIQRGAQVRENFSVVSEAIKKAAEVMTNISHQAQNQLTR
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKEVGEAAGRMAAVAQETAASIEEVAAATEEHKSTMAVVEEHTRQFTDMARNFFTMVASF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRDGWDEDLRRELIRQGQEVLARLAADPGVKKMEATTLAPILDDTFSKSPFIQTLIAALP
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DGTAIYNRPESTITNWAFRPWFQAAVRGENYASEPYVTQCTNRVAVTISVPIFGDEGRIA
CCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEECCCCCCH
GVLAANIAPARR
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]