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The map label for this gene is argF [H]

Identifier: 83590826

GI number: 83590826

Start: 2079352

End: 2080332

Strand: Reverse

Name: argF [H]

Synonym: Moth_1996

Alternate gene names: 83590826

Gene position: 2080332-2079352 (Counterclockwise)

Preceding gene: 83590827

Following gene: 83590822

Centisome position: 79.14

GC content: 54.43

Gene sequence:

>981_bases
ATGCAGACGGATCTACGCGGGAAACACTTGATCACCTTGCAGGAGTGGACCAGGGAAGAAATCGATACGCTCCTCGACAT
CGCCTTTGACCTCAAAAGACGGAAGGCCCTGGGCGAAAAACACCACCTCCTTGAGGATAAGACCTTTTATATGCTTTTCT
TCGACAATTCCACCCGCACCCGTAATGCCTTCGAGACCGGTATGACTCAGCTGGGCGGGCACGCCATTTACTTGACCCCT
AAAACCACCCAGATCGGCCATGGCGAAACCCCCAAGGATACGGTAGAGGTCCTGGGCCGTTTCGGCAACGGCATCGGGGT
CCGCAATTGCACCTACAAAGTGGGCAATGCCTACATGCGGGAACTGGCCAAGTACTCCAAGATCCCTGTAATCAACATGC
AGTGCGACCTCTATCACCCCACCCAGGCCCTGGCTGACATCATGACCATCCAGGAGAAGTTCGGTAAGAATACCCGGGGG
TTAAACTTCACCATTTCCTGGACCTATGCACCCAAATATATACGGCCCCTCTCCATGCCCCAGTCCCTCATCCTCCTAAT
GAGCCGCTTTGGCATGAACGTAACCCTGGCCCATCCGCCGGAGTTCCATTTGTTGCCGGAATTCATAGAACAGGCCAAGA
AAAACGCAGCTGAAAACGGCGTCAAGTTTAATATTGTCAATGATATGGACGAAGCCTGCAAGGACGCGGACATTATTTAC
GCCAAGAGCTGGGGCCCAATCGCTTATACCGGTAGCGACACCGAAGGTGCCGAGCTTATCGACAAGTACCCCAACTGGGT
CATGGACAGCCGGCGGATGGCTTTGGGTCACAAGGAAGCCATTTACATGCACTGCATGCCAGCTGACCGGGGCATTGAAG
TGACGGAGGAAGTCATGGACGGGCCGCAGTCAGTCATCTATGACGAAGCCGAGAACCGGCTGCACACCATCAAGGCCATC
CTGGCGGCTACCCTGAAGTAG

Upstream 100 bases:

>100_bases
CAACTTTACACCTCACCCTTCTACTTTGGTAACCGGCAGAGCCCGTAGGGGTACTTGCTGGTAGATAAATAATCATTCAT
TATTAAATGGAGGGACAAGA

Downstream 100 bases:

>100_bases
GCCTATCCTTAACGTAAGAACCATCTTTATTGCAGTAAACAACGATATTTACCAGGCGACGATGCCGTCACCCCTTTAAC
TAAAGGAGTGGCGGCTTTTT

Product: ornithine carbamoyltransferase

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MQTDLRGKHLITLQEWTREEIDTLLDIAFDLKRRKALGEKHHLLEDKTFYMLFFDNSTRTRNAFETGMTQLGGHAIYLTP
KTTQIGHGETPKDTVEVLGRFGNGIGVRNCTYKVGNAYMRELAKYSKIPVINMQCDLYHPTQALADIMTIQEKFGKNTRG
LNFTISWTYAPKYIRPLSMPQSLILLMSRFGMNVTLAHPPEFHLLPEFIEQAKKNAAENGVKFNIVNDMDEACKDADIIY
AKSWGPIAYTGSDTEGAELIDKYPNWVMDSRRMALGHKEAIYMHCMPADRGIEVTEEVMDGPQSVIYDEAENRLHTIKAI
LAATLK

Sequences:

>Translated_326_residues
MQTDLRGKHLITLQEWTREEIDTLLDIAFDLKRRKALGEKHHLLEDKTFYMLFFDNSTRTRNAFETGMTQLGGHAIYLTP
KTTQIGHGETPKDTVEVLGRFGNGIGVRNCTYKVGNAYMRELAKYSKIPVINMQCDLYHPTQALADIMTIQEKFGKNTRG
LNFTISWTYAPKYIRPLSMPQSLILLMSRFGMNVTLAHPPEFHLLPEFIEQAKKNAAENGVKFNIVNDMDEACKDADIIY
AKSWGPIAYTGSDTEGAELIDKYPNWVMDSRRMALGHKEAIYMHCMPADRGIEVTEEVMDGPQSVIYDEAENRLHTIKAI
LAATLK
>Mature_326_residues
MQTDLRGKHLITLQEWTREEIDTLLDIAFDLKRRKALGEKHHLLEDKTFYMLFFDNSTRTRNAFETGMTQLGGHAIYLTP
KTTQIGHGETPKDTVEVLGRFGNGIGVRNCTYKVGNAYMRELAKYSKIPVINMQCDLYHPTQALADIMTIQEKFGKNTRG
LNFTISWTYAPKYIRPLSMPQSLILLMSRFGMNVTLAHPPEFHLLPEFIEQAKKNAAENGVKFNIVNDMDEACKDADIIY
AKSWGPIAYTGSDTEGAELIDKYPNWVMDSRRMALGHKEAIYMHCMPADRGIEVTEEVMDGPQSVIYDEAENRLHTIKAI
LAATLK

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=325, Percent_Identity=32.9230769230769, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI18105007, Length=323, Percent_Identity=25.6965944272446, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI48994908, Length=358, Percent_Identity=36.0335195530726, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1790703, Length=338, Percent_Identity=31.9526627218935, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1786469, Length=347, Percent_Identity=32.8530259365994, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI2367364, Length=329, Percent_Identity=26.1398176291793, Blast_Score=85, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI193204318, Length=334, Percent_Identity=25.1497005988024, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322373, Length=317, Percent_Identity=25.8675078864353, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6322331, Length=295, Percent_Identity=27.4576271186441, Blast_Score=101, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24642586, Length=324, Percent_Identity=25.6172839506173, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 37086; Mature: 37086

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDLRGKHLITLQEWTREEIDTLLDIAFDLKRRKALGEKHHLLEDKTFYMLFFDNSTRT
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCC
RNAFETGMTQLGGHAIYLTPKTTQIGHGETPKDTVEVLGRFGNGIGVRNCTYKVGNAYMR
HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ELAKYSKIPVINMQCDLYHPTQALADIMTIQEKFGKNTRGLNFTISWTYAPKYIRPLSMP
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHCCCCCH
QSLILLMSRFGMNVTLAHPPEFHLLPEFIEQAKKNAAENGVKFNIVNDMDEACKDADIIY
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEE
AKSWGPIAYTGSDTEGAELIDKYPNWVMDSRRMALGHKEAIYMHCMPADRGIEVTEEVMD
EECCCCEEEECCCCCHHHHHHHCCHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHC
GPQSVIYDEAENRLHTIKAILAATLK
CCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTDLRGKHLITLQEWTREEIDTLLDIAFDLKRRKALGEKHHLLEDKTFYMLFFDNSTRT
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCC
RNAFETGMTQLGGHAIYLTPKTTQIGHGETPKDTVEVLGRFGNGIGVRNCTYKVGNAYMR
HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ELAKYSKIPVINMQCDLYHPTQALADIMTIQEKFGKNTRGLNFTISWTYAPKYIRPLSMP
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHCCCCCH
QSLILLMSRFGMNVTLAHPPEFHLLPEFIEQAKKNAAENGVKFNIVNDMDEACKDADIIY
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEE
AKSWGPIAYTGSDTEGAELIDKYPNWVMDSRRMALGHKEAIYMHCMPADRGIEVTEEVMD
EECCCCEEEECCCCCHHHHHHHCCHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHC
GPQSVIYDEAENRLHTIKAILAATLK
CCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA