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The map label for this gene is sdaAB [H]

Identifier: 83590779

GI number: 83590779

Start: 2021483

End: 2022139

Strand: Reverse

Name: sdaAB [H]

Synonym: Moth_1947

Alternate gene names: 83590779

Gene position: 2022139-2021483 (Counterclockwise)

Preceding gene: 83590780

Following gene: 83590778

Centisome position: 76.92

GC content: 63.62

Gene sequence:

>657_bases
GTGGATGCCTTTCAAATCATCGGCCCGGTAATGATCGGGCCTTCCAGTTCCCATACCGCCGGGGCGGTGCGTATCGGCCG
CCTGGCCCGGGCCATCCTGGGCGAACAGCCCTTGCGGGCCGAGATCCTTCTCCACGGCTCCTTCGCCCGCACTGTCCGCG
GCCACGGCACCGATCGGGCCCTGGTAGCCGGGCTCCTAAGTTTCGATGTTGCCGACGAAAGGGTCAGGGAAGCCCTGGAG
CTGGCTCCCCGGGAGGGGCTGGAGGTCACCTTCGGCGAGAAAGATCTGGGTGACGTCCATCCCAACTCCGTACAGTTAAA
CCTGGAGGGCCGGGAAGGGAAAGTCCAGGTGGAGGCCTCCTCCCTGGGTGGGGCCCAGGTAGTAGTTAATAAGATTGATG
CCTTTGAGGTGGAAATATACGGGGACCTGCCGACCCTGGTGGCAGCCTATCCCGACCGGCCGGGGGTAATAGCGGCGGTG
GCCGCTTTGCTGGCCGGGGTGGGAGTAAATATTGCCGGCATGCGAGTATCCCGCCGGGAAGCAGGTGAACAGGCCCTGAT
GGTCGTCGAAACCGACCAGGCAATTCCTCCGGGGCTGGTGCCGGCCATGCGGGCCCTACCAATGATGGAGCGGGTGATCC
AGATTGACCCGGTATAA

Upstream 100 bases:

>100_bases
CGGGGTATAATATAGGCGGTGGAATCAGGTGACCGGTTTTATTTCCGGTTTGGTGTCGATAGAGTTCAGGAGGATATAAC
CCGGCCACGGGGGGACCAGT

Downstream 100 bases:

>100_bases
TTTTCAAAGCATGGCTGAACTCCTGCAGATAGCCGCGGATGAAGGGCTGACCCTGGCCGGGGTAGTCATCCGCTACCAGG
AAGACCTGGAGGGTAAGAGC

Product: L-serine ammonia-lyase

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDAFQIIGPVMIGPSSSHTAGAVRIGRLARAILGEQPLRAEILLHGSFARTVRGHGTDRALVAGLLSFDVADERVREALE
LAPREGLEVTFGEKDLGDVHPNSVQLNLEGREGKVQVEASSLGGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAV
AALLAGVGVNIAGMRVSRREAGEQALMVVETDQAIPPGLVPAMRALPMMERVIQIDPV

Sequences:

>Translated_218_residues
MDAFQIIGPVMIGPSSSHTAGAVRIGRLARAILGEQPLRAEILLHGSFARTVRGHGTDRALVAGLLSFDVADERVREALE
LAPREGLEVTFGEKDLGDVHPNSVQLNLEGREGKVQVEASSLGGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAV
AALLAGVGVNIAGMRVSRREAGEQALMVVETDQAIPPGLVPAMRALPMMERVIQIDPV
>Mature_218_residues
MDAFQIIGPVMIGPSSSHTAGAVRIGRLARAILGEQPLRAEILLHGSFARTVRGHGTDRALVAGLLSFDVADERVREALE
LAPREGLEVTFGEKDLGDVHPNSVQLNLEGREGKVQVEASSLGGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAV
AALLAGVGVNIAGMRVSRREAGEQALMVVETDQAIPPGLVPAMRALPMMERVIQIDPV

Specific function: Unknown

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23023; Mature: 23023

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFQIIGPVMIGPSSSHTAGAVRIGRLARAILGEQPLRAEILLHGSFARTVRGHGTDRA
CCCHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCHH
LVAGLLSFDVADERVREALELAPREGLEVTFGEKDLGDVHPNSVQLNLEGREGKVQVEAS
HHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEC
SLGGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAVAALLAGVGVNIAGMRVSRRE
CCCCCEEEEEECCEEEEEEECCCCHHEEECCCCCCHHHHHHHHHHHCCCCEECEEEHHHH
AGEQALMVVETDQAIPPGLVPAMRALPMMERVIQIDPV
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAFQIIGPVMIGPSSSHTAGAVRIGRLARAILGEQPLRAEILLHGSFARTVRGHGTDRA
CCCHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCHH
LVAGLLSFDVADERVREALELAPREGLEVTFGEKDLGDVHPNSVQLNLEGREGKVQVEAS
HHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEC
SLGGAQVVVNKIDAFEVEIYGDLPTLVAAYPDRPGVIAAVAALLAGVGVNIAGMRVSRRE
CCCCCEEEEEECCEEEEEEECCCCHHEEECCCCCCHHHHHHHHHHHCCCCEECEEEHHHH
AGEQALMVVETDQAIPPGLVPAMRALPMMERVIQIDPV
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]