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The map label for this gene is infC [H]

Identifier: 83590593

GI number: 83590593

Start: 1811641

End: 1812105

Strand: Reverse

Name: infC [H]

Synonym: Moth_1758

Alternate gene names: 83590593

Gene position: 1812105-1811641 (Counterclockwise)

Preceding gene: 83590594

Following gene: 83590592

Centisome position: 68.93

GC content: 55.48

Gene sequence:

>465_bases
GTGCGCCTGGTTGGTGCCGACGGCCAGCAACTTGGTATCATGCCGACGCGGGAAGCCCTGCGAATAGCTCAGGAACAGGG
TATGGACCTGGTAGAAGTGGCCCCAACGGCGCGACCGCCAGTTTGCCGTATTATGGATTTCGGCAAGTATAAATACGAGC
AGAGCAAGCGGGAGCGCGAGGCCAGGAAGAAACAGCGTATAATAAACATCAAAGAGGTCAAACTGCGCCTGAACATCGAG
GAACATGACTTCCAGGTCAAAACGCGCAACGCCATTCGCTTTTTGCAGGATGGCGACAAGGTGAAGGTGACGATTATGTT
TCGTGGCCGCGAGATTGCCCACGCCGATCTCGGCCTGAAGTTGTGCCAGCGGGTGGCCGACCAGGTGGCGGACCTTGCCT
CCATTGAAAAACCGCCCAAAGTAGAGGGACGTAATATGACCATGATTCTGGCTCCCAAGTCGTAA

Upstream 100 bases:

>100_bases
GAAGCGGTTGCGAGGTCTTTTGCTGGGCGGTAAATCTAGCTGGAGGTGACGCATTATCAGCAAGGATTTAAGGGTCAATG
GAGAAATCCGGACCCGTGAT

Downstream 100 bases:

>100_bases
AAGAATACTTATTCTTGAGGTGATAACCATGCCAAAAATGAAGACCCACCGGGGCGCGGCCAAAAGGCTGCGGGTAACTG
CCTCGGGGAAGGTTAAGAGA

Product: translation initiation factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRLVGADGQQLGIMPTREALRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKREREARKKQRIINIKEVKLRLNIE
EHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLKLCQRVADQVADLASIEKPPKVEGRNMTMILAPKS

Sequences:

>Translated_154_residues
MRLVGADGQQLGIMPTREALRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKREREARKKQRIINIKEVKLRLNIE
EHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLKLCQRVADQVADLASIEKPPKVEGRNMTMILAPKS
>Mature_154_residues
MRLVGADGQQLGIMPTREALRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKREREARKKQRIINIKEVKLRLNIE
EHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLKLCQRVADQVADLASIEKPPKVEGRNMTMILAPKS

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=154, Percent_Identity=54.5454545454545, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 17639; Mature: 17639

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGADGQQLGIMPTREALRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKRERE
CEEECCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHH
ARKKQRIINIKEVKLRLNIEEHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLK
HHHHHHCCCEEEEEEEEEECCCCEEEEHHHHHHHHCCCCEEEEEEEECCCEEEHHHHHHH
LCQRVADQVADLASIEKPPKVEGRNMTMILAPKS
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRLVGADGQQLGIMPTREALRIAQEQGMDLVEVAPTARPPVCRIMDFGKYKYEQSKRERE
CEEECCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHH
ARKKQRIINIKEVKLRLNIEEHDFQVKTRNAIRFLQDGDKVKVTIMFRGREIAHADLGLK
HHHHHHCCCEEEEEEEEEECCCCEEEEHHHHHHHHCCCCEEEEEEEECCCEEEHHHHHHH
LCQRVADQVADLASIEKPPKVEGRNMTMILAPKS
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]