Click here to switch to the map view.

The map label for this gene is opuCC [H]

Identifier: 83590521

GI number: 83590521

Start: 1723787

End: 1724701

Strand: Reverse

Name: opuCC [H]

Synonym: Moth_1685

Alternate gene names: 83590521

Gene position: 1724701-1723787 (Counterclockwise)

Preceding gene: 83590522

Following gene: 83590520

Centisome position: 65.61

GC content: 48.96

Gene sequence:

>915_bases
TTGCGCCAGAAATCCAAACGAGTGGGGAAGCTGATCGCGCTATTTACAGGCATCGCTATGTTGCTATTTGTAGCTGCCGG
CTGCAGTGGAACCAGGGCTAAAGGCACAGTGGTTGTAGGGTCCAAGGACTTTACCGAAAACATTCTCCTTGGCGAGATAA
TGGCCCAGCTCATAGAAGCCCATACGGACCTGAAGGTGGAACGCAAATTGAACTTGGGCGGTACATTGGTTAACTTTAAC
GCCCTTAAAAAAGGCGACCTTGATCTCTACGCTGACTACACCGGTACCGGCCTAGTGGCAATCTTAAAAAGGGATGTTAT
CAATGACCCCCAGGAGGCTTACGATGCAGTTCAAAAGGCATACAACGAGCAGTTTAAGCTAAAGTGGCTGAAACCCTTTG
GCTTTAATAACACCTACGCCCTTGCGGTACCGGAGGAGGTTGCTCGACAGCGTAACTTACAAAAAATATCCGACCTGAAA
AGCGTAGCCGGTGAGATGGTACTCGGGGCCGAGCAGGAATTTTTTAACCGCCCGGACGGCTATGACGGCTTAATTGTCAC
TTACGGGCTAAATTTCAAAAGCACCAAGCAGATGGAAACCGGCTTAAAATACGAAGCCATTCATAACAAGATGGTAGATG
TGATCGACGCCTTCGCCACCGACGGCCAGTTGATTACCTATAAGCTAAAGATCCTGGAAGATGATAAACAATTCTTCCCG
CCCTACTTTGCTGCACCGTTGGTACGTATGGACACCCTCGAGAAGTATCCCCAGCTGGAAGAAGTCCTGAACAAGCTGGC
GGGCCAGCTCAATGATGATGAGATGCGTCAGCTGAATTATCAGGTCGACGAGGAAAAAAAGGAAGTGGCCCAGGTGGCAA
GAGATTTCCTGCTGAAAAAAGGCCTGATCAAGTAA

Upstream 100 bases:

>100_bases
ACTGGCCCTGCTGGAACAAGTATTGGTTCCGCGGGGGCTCAAAAAAAAGGCTATCTCAGCATTATAAATTAATTATAAAT
TAAAGAAAGGATGGGATATC

Downstream 100 bases:

>100_bases
CATGAGGGTATAAAGCTTACGAAGAGTTTATCTGCACCAATAAAGGGATACTATTGTCGAACTAATATGAATCCGCCAGT
ACACGGAGTCCGCCGGTTTC

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRQKSKRVGKLIALFTGIAMLLFVAAGCSGTRAKGTVVVGSKDFTENILLGEIMAQLIEAHTDLKVERKLNLGGTLVNFN
ALKKGDLDLYADYTGTGLVAILKRDVINDPQEAYDAVQKAYNEQFKLKWLKPFGFNNTYALAVPEEVARQRNLQKISDLK
SVAGEMVLGAEQEFFNRPDGYDGLIVTYGLNFKSTKQMETGLKYEAIHNKMVDVIDAFATDGQLITYKLKILEDDKQFFP
PYFAAPLVRMDTLEKYPQLEEVLNKLAGQLNDDEMRQLNYQVDEEKKEVAQVARDFLLKKGLIK

Sequences:

>Translated_304_residues
MRQKSKRVGKLIALFTGIAMLLFVAAGCSGTRAKGTVVVGSKDFTENILLGEIMAQLIEAHTDLKVERKLNLGGTLVNFN
ALKKGDLDLYADYTGTGLVAILKRDVINDPQEAYDAVQKAYNEQFKLKWLKPFGFNNTYALAVPEEVARQRNLQKISDLK
SVAGEMVLGAEQEFFNRPDGYDGLIVTYGLNFKSTKQMETGLKYEAIHNKMVDVIDAFATDGQLITYKLKILEDDKQFFP
PYFAAPLVRMDTLEKYPQLEEVLNKLAGQLNDDEMRQLNYQVDEEKKEVAQVARDFLLKKGLIK
>Mature_304_residues
MRQKSKRVGKLIALFTGIAMLLFVAAGCSGTRAKGTVVVGSKDFTENILLGEIMAQLIEAHTDLKVERKLNLGGTLVNFN
ALKKGDLDLYADYTGTGLVAILKRDVINDPQEAYDAVQKAYNEQFKLKWLKPFGFNNTYALAVPEEVARQRNLQKISDLK
SVAGEMVLGAEQEFFNRPDGYDGLIVTYGLNFKSTKQMETGLKYEAIHNKMVDVIDAFATDGQLITYKLKILEDDKQFFP
PYFAAPLVRMDTLEKYPQLEEVLNKLAGQLNDDEMRQLNYQVDEEKKEVAQVARDFLLKKGLIK

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=308, Percent_Identity=32.1428571428571, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34235; Mature: 34235

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKSKRVGKLIALFTGIAMLLFVAAGCSGTRAKGTVVVGSKDFTENILLGEIMAQLIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
HTDLKVERKLNLGGTLVNFNALKKGDLDLYADYTGTGLVAILKRDVINDPQEAYDAVQKA
HCCCEEEEEECCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHH
YNEQFKLKWLKPFGFNNTYALAVPEEVARQRNLQKISDLKSVAGEMVLGAEQEFFNRPDG
HCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
YDGLIVTYGLNFKSTKQMETGLKYEAIHNKMVDVIDAFATDGQLITYKLKILEDDKQFFP
CCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHCC
PYFAAPLVRMDTLEKYPQLEEVLNKLAGQLNDDEMRQLNYQVDEEKKEVAQVARDFLLKK
CHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLIK
CCCC
>Mature Secondary Structure
MRQKSKRVGKLIALFTGIAMLLFVAAGCSGTRAKGTVVVGSKDFTENILLGEIMAQLIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
HTDLKVERKLNLGGTLVNFNALKKGDLDLYADYTGTGLVAILKRDVINDPQEAYDAVQKA
HCCCEEEEEECCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHH
YNEQFKLKWLKPFGFNNTYALAVPEEVARQRNLQKISDLKSVAGEMVLGAEQEFFNRPDG
HCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
YDGLIVTYGLNFKSTKQMETGLKYEAIHNKMVDVIDAFATDGQLITYKLKILEDDKQFFP
CCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHCC
PYFAAPLVRMDTLEKYPQLEEVLNKLAGQLNDDEMRQLNYQVDEEKKEVAQVARDFLLKK
CHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLIK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]