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The map label for this gene is yndE [H]

Identifier: 83589860

GI number: 83589860

Start: 1040373

End: 1041452

Strand: Reverse

Name: yndE [H]

Synonym: Moth_1012

Alternate gene names: 83589860

Gene position: 1041452-1040373 (Counterclockwise)

Preceding gene: 83589861

Following gene: 83589856

Centisome position: 39.62

GC content: 47.59

Gene sequence:

>1080_bases
TTGCGGGAAAGAATTGGAACGAACGAAGCCACCTTTTTAATTGTTGCGGCAATGATTGAAGTGGGGACGTTAAAAGGGGC
CAGGAATATTGTTGAAAAAGTCGGGGTGGACACCTGGCTGGTATCTCCCCTGGAAACTATATTCAGCCTCGGAGCTATTT
ACCTCCTGACCGCGCTTGTTATGAAATTTCCTGACCTGGACCTAGTTGGTTTTAGCCGCCGCCTGGTAGGCAAGTGGCTG
GCCTGGCTTTTAGGTTTAATAGTTTTAGTTTACTGGGTTGGTTTAACGGCCGAGGTCGGCCGGGTAACTGCTGATACTAT
TAAGAGTTCTTTGTTGTCGCACACACCCGATGCAGTAGTGTTATCTTCTTACCTGCTGGTAGCGGCCTACCTGGCTGGAA
AGGGTTTAGAGCCCCTGGCACGTGCTTCTATCATCATTGTTATTTTTACTTTACCCATCACCTTGCTTCTCTTTGCCCTG
GTTATACCGCGAATCCATCTGGACAACTTCTTACCCATCTTGCCCCATGGACCCTGGCCGGTGATAAAGCTGGCTTTATG
GCGGATTAGTAACGCTGAAGAGATGAGTCTTTTCCTTATCCTGGTTCCTTTTTTAAAGGAACCCCGGCGAGCCTGGCGTG
CCGCCAGCTATGGCTTTTTAACAGTCATGGCAGTAGTGATCACCATTATAACTACCTGTCAGGGGGTTCTGGGGGTAGAT
CAACTGAAGTATACGCTGATTCCAGGTTTAACTGTGACGCAACTGGCAGAATTCGCTGGAGCCTTTATCGAACGGATTAG
CCTGATATTCATTTCTGTATGGATTATTTTAGTCTTTCCTACCGCCTCGGCTCTCCTCTGGGCAAGCTCATATTTGCTAG
GCCGCCTCTTAAACTTAAAAGACTATAAAATGTTGGCTTTTTACCAGTTACCCGTAGTTTATTACTTAGCCTGGCGGCCC
GGTAATCCCTTTGAAGTTAAAAGCTTCTTTTTCTTTCTTCAACCCCTGGGCCTGGTGGTATTGGTAGGCATCCCCTCCTT
ACTTTATCTTGTTGCCCTTTTTCGTTGTCGCGCTCGGTGA

Upstream 100 bases:

>100_bases
GGAAAACATTAAGAATAACTGGCGGCAAATTTTTATGCAGATGCCTGTATCAGTGGATGTAAAGATTAAAATTCGTCATA
CGGGCATGGTGAGCTAGAGA

Downstream 100 bases:

>100_bases
GACCCCTGGGGGCTTAAAACAATCCAGGTACTGCACACCTGCTAAGGCTTCCCTGGCCACCTTTTAGCGCTATGTGACCA
GTACCCTGACCTAGCCGAAT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRERIGTNEATFLIVAAMIEVGTLKGARNIVEKVGVDTWLVSPLETIFSLGAIYLLTALVMKFPDLDLVGFSRRLVGKWL
AWLLGLIVLVYWVGLTAEVGRVTADTIKSSLLSHTPDAVVLSSYLLVAAYLAGKGLEPLARASIIIVIFTLPITLLLFAL
VIPRIHLDNFLPILPHGPWPVIKLALWRISNAEEMSLFLILVPFLKEPRRAWRAASYGFLTVMAVVITIITTCQGVLGVD
QLKYTLIPGLTVTQLAEFAGAFIERISLIFISVWIILVFPTASALLWASSYLLGRLLNLKDYKMLAFYQLPVVYYLAWRP
GNPFEVKSFFFFLQPLGLVVLVGIPSLLYLVALFRCRAR

Sequences:

>Translated_359_residues
MRERIGTNEATFLIVAAMIEVGTLKGARNIVEKVGVDTWLVSPLETIFSLGAIYLLTALVMKFPDLDLVGFSRRLVGKWL
AWLLGLIVLVYWVGLTAEVGRVTADTIKSSLLSHTPDAVVLSSYLLVAAYLAGKGLEPLARASIIIVIFTLPITLLLFAL
VIPRIHLDNFLPILPHGPWPVIKLALWRISNAEEMSLFLILVPFLKEPRRAWRAASYGFLTVMAVVITIITTCQGVLGVD
QLKYTLIPGLTVTQLAEFAGAFIERISLIFISVWIILVFPTASALLWASSYLLGRLLNLKDYKMLAFYQLPVVYYLAWRP
GNPFEVKSFFFFLQPLGLVVLVGIPSLLYLVALFRCRAR
>Mature_359_residues
MRERIGTNEATFLIVAAMIEVGTLKGARNIVEKVGVDTWLVSPLETIFSLGAIYLLTALVMKFPDLDLVGFSRRLVGKWL
AWLLGLIVLVYWVGLTAEVGRVTADTIKSSLLSHTPDAVVLSSYLLVAAYLAGKGLEPLARASIIIVIFTLPITLLLFAL
VIPRIHLDNFLPILPHGPWPVIKLALWRISNAEEMSLFLILVPFLKEPRRAWRAASYGFLTVMAVVITIITTCQGVLGVD
QLKYTLIPGLTVTQLAEFAGAFIERISLIFISVWIILVFPTASALLWASSYLLGRLLNLKDYKMLAFYQLPVVYYLAWRP
GNPFEVKSFFFFLQPLGLVVLVGIPSLLYLVALFRCRAR

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 39979; Mature: 39979

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERIGTNEATFLIVAAMIEVGTLKGARNIVEKVGVDTWLVSPLETIFSLGAIYLLTALV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MKFPDLDLVGFSRRLVGKWLAWLLGLIVLVYWVGLTAEVGRVTADTIKSSLLSHTPDAVV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHH
LSSYLLVAAYLAGKGLEPLARASIIIVIFTLPITLLLFALVIPRIHLDNFLPILPHGPWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VIKLALWRISNAEEMSLFLILVPFLKEPRRAWRAASYGFLTVMAVVITIITTCQGVLGVD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QLKYTLIPGLTVTQLAEFAGAFIERISLIFISVWIILVFPTASALLWASSYLLGRLLNLK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DYKMLAFYQLPVVYYLAWRPGNPFEVKSFFFFLQPLGLVVLVGIPSLLYLVALFRCRAR
CHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRERIGTNEATFLIVAAMIEVGTLKGARNIVEKVGVDTWLVSPLETIFSLGAIYLLTALV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MKFPDLDLVGFSRRLVGKWLAWLLGLIVLVYWVGLTAEVGRVTADTIKSSLLSHTPDAVV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHH
LSSYLLVAAYLAGKGLEPLARASIIIVIFTLPITLLLFALVIPRIHLDNFLPILPHGPWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VIKLALWRISNAEEMSLFLILVPFLKEPRRAWRAASYGFLTVMAVVITIITTCQGVLGVD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QLKYTLIPGLTVTQLAEFAGAFIERISLIFISVWIILVFPTASALLWASSYLLGRLLNLK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DYKMLAFYQLPVVYYLAWRPGNPFEVKSFFFFLQPLGLVVLVGIPSLLYLVALFRCRAR
CHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]