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The map label for this gene is yjiM [C]

Identifier: 83589856

GI number: 83589856

Start: 1035657

End: 1036706

Strand: Reverse

Name: yjiM [C]

Synonym: Moth_1007

Alternate gene names: 83589856

Gene position: 1036706-1035657 (Counterclockwise)

Preceding gene: 83589860

Following gene: 83589855

Centisome position: 39.44

GC content: 58.0

Gene sequence:

>1050_bases
ATGAGCCATTTAGTGGGTTGGCTGTGCCACTATACGCCGGTAGAAATTTTTACGGCTCTCGGGTACACCCCTTACCGGCT
GCTGGGCCGGGAGGGCAATAACCCCCGCGCCGCTACATATCTGGTGGGCAACCTCTGCCCTTATGTCCAGAGCTGCCTCG
AGGCAGCCATCAAACAGGAGTTACCCCTCCTGGCCGGCGTCGTAATCGCCCGATCTTGCAATGCCATGATCCACCTGGCT
AATGTCTGGCCCCATTATGGTGCAGGGGGTAAGACCGTAGTCCTCGATGTACCCCGCCGGTTCGACGAGGACGCAGTTTT
CTATTTCAGCCAGAATCTACGCCGTCTGGCGGCAGAACTAGCTCCCCCTGGGGAGCGACAATTAAATGAAGAACGTTTGT
GGGCGGCCATTACCTGGTGGGAAGAACAACGGGCAGCCTGGCGCGAGCTTTTAGCCTGCCGGGCTGCGTGGGAAGACCCT
CCCGGCGGGAAAGAAATCATGGACGGGCTGGCCAGGTGGCAAACTCCCCTTAATCCCCAGGAGGCAGATAAATGGGAGAC
TGTAATTACTCGGTTAACCAGGCAACCCCGGGTGAAAACCGCCCGGCGGCCGCGCCTGCTGCTAGCGGGAAGCATCCTCC
CGCGGGAATTGATTACTATGGTGGAAGAGTGCGGCGGTTTATCTGTTTTCGAGGACAGCTGCAATGGCATGCGGCTATTA
CTGGCCCCCGCCGCCAGGGCCGAGGGTGACCCTTACCTCTACCTGGCCAGGCTCTACCTGGGAGGACCCCCATGTCCCCG
GATGGTAGGCGACCGGGAGAAACGACGCCAGTACTGGGCCGCAGCTGTAGACCGGTTCCGTATCCAGGGAATCATTTACC
ATGCCATGAAGTTCTGCGACGCCGCTATGTACGACTACATAGCCCTGAAGGTTTTTAGTGAAAAAAAGGGGTTACCCCTT
CTTCGTCTTGATGGGGATTTCAGCGGCGGTAATCGGGGTCAATGGCAGACGCGGCTGGAAGCCTTTTTAGAAATGCTAGG
GGTGGAGTAA

Upstream 100 bases:

>100_bases
GCCGGCTGGAAAGAGTTATAATATATTTCATTAGAGACTCTCCTGCCACGGATCTGGATATCGCCAGGGCCGGGCAGGCC
TAAATTGATGGGAGTAAAAT

Downstream 100 bases:

>100_bases
TGGATATCTACCAGCTCTTGCGCTCTCACCTGGGAAACGCCTTGCGCCAGCGCGCCTTTAAATCCCCCTGGACATATAGA
TTATTGCGGCAGGCCGTAGC

Product: 2-hydroxyglutaryl-CoA dehydratase, D-component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSHLVGWLCHYTPVEIFTALGYTPYRLLGREGNNPRAATYLVGNLCPYVQSCLEAAIKQELPLLAGVVIARSCNAMIHLA
NVWPHYGAGGKTVVLDVPRRFDEDAVFYFSQNLRRLAAELAPPGERQLNEERLWAAITWWEEQRAAWRELLACRAAWEDP
PGGKEIMDGLARWQTPLNPQEADKWETVITRLTRQPRVKTARRPRLLLAGSILPRELITMVEECGGLSVFEDSCNGMRLL
LAPAARAEGDPYLYLARLYLGGPPCPRMVGDREKRRQYWAAAVDRFRIQGIIYHAMKFCDAAMYDYIALKVFSEKKGLPL
LRLDGDFSGGNRGQWQTRLEAFLEMLGVE

Sequences:

>Translated_349_residues
MSHLVGWLCHYTPVEIFTALGYTPYRLLGREGNNPRAATYLVGNLCPYVQSCLEAAIKQELPLLAGVVIARSCNAMIHLA
NVWPHYGAGGKTVVLDVPRRFDEDAVFYFSQNLRRLAAELAPPGERQLNEERLWAAITWWEEQRAAWRELLACRAAWEDP
PGGKEIMDGLARWQTPLNPQEADKWETVITRLTRQPRVKTARRPRLLLAGSILPRELITMVEECGGLSVFEDSCNGMRLL
LAPAARAEGDPYLYLARLYLGGPPCPRMVGDREKRRQYWAAAVDRFRIQGIIYHAMKFCDAAMYDYIALKVFSEKKGLPL
LRLDGDFSGGNRGQWQTRLEAFLEMLGVE
>Mature_348_residues
SHLVGWLCHYTPVEIFTALGYTPYRLLGREGNNPRAATYLVGNLCPYVQSCLEAAIKQELPLLAGVVIARSCNAMIHLAN
VWPHYGAGGKTVVLDVPRRFDEDAVFYFSQNLRRLAAELAPPGERQLNEERLWAAITWWEEQRAAWRELLACRAAWEDPP
GGKEIMDGLARWQTPLNPQEADKWETVITRLTRQPRVKTARRPRLLLAGSILPRELITMVEECGGLSVFEDSCNGMRLLL
APAARAEGDPYLYLARLYLGGPPCPRMVGDREKRRQYWAAAVDRFRIQGIIYHAMKFCDAAMYDYIALKVFSEKKGLPLL
RLDGDFSGGNRGQWQTRLEAFLEMLGVE

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 39567; Mature: 39436

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLVGWLCHYTPVEIFTALGYTPYRLLGREGNNPRAATYLVGNLCPYVQSCLEAAIKQE
CCHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPLLAGVVIARSCNAMIHLANVWPHYGAGGKTVVLDVPRRFDEDAVFYFSQNLRRLAAEL
CHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
APPGERQLNEERLWAAITWWEEQRAAWRELLACRAAWEDPPGGKEIMDGLARWQTPLNPQ
CCCCHHHCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
EADKWETVITRLTRQPRVKTARRPRLLLAGSILPRELITMVEECGGLSVFEDSCNGMRLL
HHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEEE
LAPAARAEGDPYLYLARLYLGGPPCPRMVGDREKRRQYWAAAVDRFRIQGIIYHAMKFCD
EECCCCCCCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMYDYIALKVFSEKKGLPLLRLDGDFSGGNRGQWQTRLEAFLEMLGVE
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHLVGWLCHYTPVEIFTALGYTPYRLLGREGNNPRAATYLVGNLCPYVQSCLEAAIKQE
CHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPLLAGVVIARSCNAMIHLANVWPHYGAGGKTVVLDVPRRFDEDAVFYFSQNLRRLAAEL
CHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH
APPGERQLNEERLWAAITWWEEQRAAWRELLACRAAWEDPPGGKEIMDGLARWQTPLNPQ
CCCCHHHCCHHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
EADKWETVITRLTRQPRVKTARRPRLLLAGSILPRELITMVEECGGLSVFEDSCNGMRLL
HHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEEE
LAPAARAEGDPYLYLARLYLGGPPCPRMVGDREKRRQYWAAAVDRFRIQGIIYHAMKFCD
EECCCCCCCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMYDYIALKVFSEKKGLPLLRLDGDFSGGNRGQWQTRLEAFLEMLGVE
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]