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The map label for this gene is ytxE [H]

Identifier: 83589323

GI number: 83589323

Start: 460703

End: 461452

Strand: Reverse

Name: ytxE [H]

Synonym: Moth_0458

Alternate gene names: 83589323

Gene position: 461452-460703 (Counterclockwise)

Preceding gene: 83589324

Following gene: 83589313

Centisome position: 17.55

GC content: 60.93

Gene sequence:

>750_bases
GTGCCGGTCCGCAGGGAAGGGCACGCCAGCAAGGATAACCATGAGCGCTGGCTGTTGACCTATTCCGACTTGATTACCCT
GTTGATGATCTTCTTTGTCGTAATGTATGCCATCAGCGATACCAACGCCCAGAAAATGGCCGCCCTGGCCAACTCCCTGG
CTCAAACCCTAACCGGCGCCCCGACGACTGGAATCTTAACGTCCGGAGGCCTGACCTCTATAGTACCTGGTATCGCCCCG
GCACCGGGCCAGGGGGATGAAGGGGCCGAACTGGCCAGGGCCAGGGCGGAACTACAGCAGTATATCCAGCAGGAAGGCCT
GGAAAGCCAGGTGACCCTCAATACCGAGGAACGGGGCCTGGTGGTCAGTGTGGCCGATGCCGTCCTCTTCCCCAAGGGTT
CCGCCGATTTGACCCCCGAAGCCCGGGACCTCCTGCGCCAGGTCGGCCGGGCCCTGGCCCGCCTACCCAATTATTTACGG
GTTGAAGGCCACACCGACAATCTCCCCATCAACACCCCGGCCTTCCCATCCAACTGGGAACTCTCCACGGCCCGGGCCAC
CAACGTGGTCAAGGTTTTAATCAGCGAAGCCGGGATCAAACCGGAACGCCTTTCGGCCACCGGCTACGGAGAATATCGCC
CGGTGGCCCCCAATAATAGCGAGGCTGATATGGCCCGCAACCGCCGGGTGGATATCGTCGTCCTCAAGGAAGCCTACAAC
GTCACCGAGCCCCATAAGGGCGAGAAGTAA

Upstream 100 bases:

>100_bases
GGCAAGAACCCCACCTTGATCCGCAACACCCTGGCGGCCTTCCTGGCCCCGGGTAAGGAAAGGGCAGGTGCCGGGAAGGA
AGAGCGGGAGGTGAGCGATG

Downstream 100 bases:

>100_bases
TATAAAAAGCGCCAGGTGAAACACCCGGCGCTTCTATTCTCCATACTATTCTTTAGGCCTGTTCCTTCTGGCGTCCCAGG
TTGGAGTAAAAAATAATCCG

Product: OmpA/MotB

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPVRREGHASKDNHERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGAPTTGILTSGGLTSIVPGIAP
APGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGLVVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLR
VEGHTDNLPINTPAFPSNWELSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEADMARNRRVDIVVLKEAYN
VTEPHKGEK

Sequences:

>Translated_249_residues
MPVRREGHASKDNHERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGAPTTGILTSGGLTSIVPGIAP
APGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGLVVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLR
VEGHTDNLPINTPAFPSNWELSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEADMARNRRVDIVVLKEAYN
VTEPHKGEK
>Mature_248_residues
PVRREGHASKDNHERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGAPTTGILTSGGLTSIVPGIAPA
PGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGLVVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLRV
EGHTDNLPINTPAFPSNWELSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEADMARNRRVDIVVLKEAYNV
TEPHKGEK

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=264, Percent_Identity=26.8939393939394, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27015; Mature: 26884

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRREGHASKDNHERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGA
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PTTGILTSGGLTSIVPGIAPAPGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGL
CCCCEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE
VVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLRVEGHTDNLPINTPAFPSNWE
EEEEEEEHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
LSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEADMARNRRVDIVVLKEAYN
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCC
VTEPHKGEK
CCCCCCCCC
>Mature Secondary Structure 
PVRREGHASKDNHERWLLTYSDLITLLMIFFVVMYAISDTNAQKMAALANSLAQTLTGA
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PTTGILTSGGLTSIVPGIAPAPGQGDEGAELARARAELQQYIQQEGLESQVTLNTEERGL
CCCCEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCE
VVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLRVEGHTDNLPINTPAFPSNWE
EEEEEEEHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCC
LSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEADMARNRRVDIVVLKEAYN
CHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCC
VTEPHKGEK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]