Click here to switch to the map view.

The map label for this gene is yeiE [H]

Identifier: 83589313

GI number: 83589313

Start: 448358

End: 449251

Strand: Reverse

Name: yeiE [H]

Synonym: Moth_0448

Alternate gene names: 83589313

Gene position: 449251-448358 (Counterclockwise)

Preceding gene: 83589323

Following gene: 83589285

Centisome position: 17.09

GC content: 55.15

Gene sequence:

>894_bases
GTGAACATCAACCACCTGGAGGCCTTTTGCACCGTAGCCCAGGTGAAGTCGATCTCCGAAGCAGCCCGTATCCTGCATAT
GTCCCAATCTTCCCTGAGTTACCAGATTCAATTACTGGAAAAAGACCTGGATGTCGAGCTCTTCACCCGCACAACGAAAG
GGGTGGAGCTGACGGAGATGGGGGAAATTGTTTACGAGTATGGGCAAACCTTTCTCCAGCTGGCAGAAAACCTCAGGCGT
GACCTGGATAACTGGAAAAGCGGCCAGGAACATCTCATCGTCGGCGCCAGCAGCAGCATCGGTAGCTATGCCCTGCCATG
TACCATTTATAGTTTTAAAGAAAAATACCCCGACGCCAATGTCAAGCTACTGGTTGGCAACCGGGAAGAAACCATCCAGA
AACTATTGGATAAAACCATCGATATCGGCCTCATCGAAGGTCCGGTAGACCAGCCCGGCCTGGCCACCCGGGGCGTAACC
GAGGATGAATTACTTTTAATTGTCCCCGCCGGCTGGCAGGGCCAGGAAAGCATCACCCTGGAAGAACTCTGCCGTCTGCC
CCTCATCCTCAGAGAAGAGGGTTCCGGTACCCGCCAGGTCATCGCCCGGGCCCTGGCCGAGCATGGCCTGGGTATAGCCA
ATCTAAACGTCGTCCTGGAGTTGAACTCCAACGACGCCATCAAATCGGCCATCACGGCCGGCCACGGGGTTTCCCTCCTT
TCCCGCCTGGCCACCCGGCGGGAAATCCACAACGGTAGTCTCAAGGCCCTGCAGGTAAAGGGCATTTCCTTCCGCAGCAC
CTTTACCATCGTTTATCCGGCGGGAAAACCGGCCACCAACCTCCAGAAAAAGTTTTTCCGTTTCTTGCTGGCCAACAAGA
AGGCCTTCTGCTAA

Upstream 100 bases:

>100_bases
CAGTTGCGTATCCGGGGCCACAACAATCCCTGCCTTACCACCATCTTATCGGCTCTTATGTTATAATAAAACCGTAACTT
CCGTTAAAGGAGGTTGCCCT

Downstream 100 bases:

>100_bases
TTAAACCTTCTTGATGGTAACCTCCCAGATACCATTGGCCACTTCCCTTACTTCAACGCGGTGCCCCATTTTCGCCATTG
TTTCAGCCAGGGACTGGCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEMGEIVYEYGQTFLQLAENLRR
DLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDANVKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVT
EDELLLIVPAGWQGQESITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGVSLL
SRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFLLANKKAFC

Sequences:

>Translated_297_residues
MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEMGEIVYEYGQTFLQLAENLRR
DLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDANVKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVT
EDELLLIVPAGWQGQESITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGVSLL
SRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFLLANKKAFC
>Mature_297_residues
MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEMGEIVYEYGQTFLQLAENLRR
DLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDANVKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVT
EDELLLIVPAGWQGQESITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGVSLL
SRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFLLANKKAFC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=292, Percent_Identity=32.1917808219178, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1790208, Length=250, Percent_Identity=27.2, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788297, Length=249, Percent_Identity=24.8995983935743, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788748, Length=248, Percent_Identity=26.6129032258064, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1787601, Length=158, Percent_Identity=34.8101265822785, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1788296, Length=249, Percent_Identity=30.1204819277108, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787806, Length=251, Percent_Identity=23.9043824701195, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI157672245, Length=230, Percent_Identity=29.1304347826087, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790399, Length=291, Percent_Identity=25.7731958762887, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787879, Length=301, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788887, Length=171, Percent_Identity=30.4093567251462, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI145693105, Length=300, Percent_Identity=23.3333333333333, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786401, Length=293, Percent_Identity=25.5972696245734, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082132, Length=285, Percent_Identity=23.1578947368421, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789173, Length=262, Percent_Identity=28.2442748091603, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787530, Length=249, Percent_Identity=25.3012048192771, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789204, Length=314, Percent_Identity=23.2484076433121, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081904, Length=206, Percent_Identity=26.6990291262136, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32812; Mature: 32812

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEECCCCCCCHHHH
GEIVYEYGQTFLQLAENLRRDLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCEEEEEHHHHCCCCC
VKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVTEDELLLIVPAGWQGQESITL
EEEEECCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
EELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGVSLL
HHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCHHHHH
SRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFLLANKKAFC
HHHHHHHHHCCCCEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEECCCCCCCHHHH
GEIVYEYGQTFLQLAENLRRDLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCEEEEEHHHHCCCCC
VKLLVGNREETIQKLLDKTIDIGLIEGPVDQPGLATRGVTEDELLLIVPAGWQGQESITL
EEEEECCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCH
EELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKSAITAGHGVSLL
HHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCHHHHH
SRLATRREIHNGSLKALQVKGISFRSTFTIVYPAGKPATNLQKKFFRFLLANKKAFC
HHHHHHHHHCCCCEEEEEEECEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]