Click here to switch to the map view.

The map label for this gene is yfdZ [C]

Identifier: 83588891

GI number: 83588891

Start: 17068

End: 17646

Strand: Reverse

Name: yfdZ [C]

Synonym: Moth_0017

Alternate gene names: 83588891

Gene position: 17646-17068 (Counterclockwise)

Preceding gene: 83588920

Following gene: 83588875

Centisome position: 0.67

GC content: 56.82

Gene sequence:

>579_bases
ATGCCTGACGGGGAAAAAAATATCGCCAGCAGGGCTAGGGGAATGCCGCCCTTTATTGTCATGGACATCCTGGAAAAGGC
CAAAGAAATGGAAGCCATCAACGGCTTCTCCAAACTCTACGCCATGACCGGCTGGCGCCTGGGTTACGTCATCGCCCCGC
CGGAATTTATCCGCCCTTTACAAAAACTGCAGCAAAACCTCTTTATCTGCGCCGGTTCCTTCGTCCAGGCCGCAGGTATC
GCCGCCCTGCGGGAATGTGACGAACACGTGGCGCAAATGGTCGCCACTTACGACGAGCGCCGCCGCTATCTTTTAGCACG
CCTCAAGACCATGGGCCTGGCCACCCGGGTCGAGCCTACCGGCGCCTTCTATGCCCTGGCCAACGTTAAGAAATATACCG
GCGATTCCTATTCCTTCGCCTTTGAAATTTTAGAGAAGGCCCGGGTAGCCGTCACCCCGGGTATCGACTTCGGCCGCAAC
TGCGAGGGGTATCTCCGCATCTCCTACGCCAATTCCCTGGAAAACATCAAAGAAGGCCTGGACCGCCTGGCAGAGTTTCT
GGCCGGGAAAAAGGCGTAA

Upstream 100 bases:

>100_bases
TCATTATAGCACATGAGTTAAGAGGCAGGATTTCGCCTTCCCTGTAGCGAAAAAAGCGTTAACCCATTATCATTCTCAGT
CAATTAAAGTGGTGAAGATC

Downstream 100 bases:

>100_bases
AAGGGCCGCTAATTAGTGTAAAGACCCGCGCTCCAACGGCGGGTCTTTAATTCGTCCTATGATGTTTTTACTAACACCTC
TCTTACTTCTTTAGCACCGG

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPDGEKNIASRARGMPPFIVMDILEKAKEMEAINGFSKLYAMTGWRLGYVIAPPEFIRPLQKLQQNLFICAGSFVQAAGI
AALRECDEHVAQMVATYDERRRYLLARLKTMGLATRVEPTGAFYALANVKKYTGDSYSFAFEILEKARVAVTPGIDFGRN
CEGYLRISYANSLENIKEGLDRLAEFLAGKKA

Sequences:

>Translated_192_residues
MPDGEKNIASRARGMPPFIVMDILEKAKEMEAINGFSKLYAMTGWRLGYVIAPPEFIRPLQKLQQNLFICAGSFVQAAGI
AALRECDEHVAQMVATYDERRRYLLARLKTMGLATRVEPTGAFYALANVKKYTGDSYSFAFEILEKARVAVTPGIDFGRN
CEGYLRISYANSLENIKEGLDRLAEFLAGKKA
>Mature_191_residues
PDGEKNIASRARGMPPFIVMDILEKAKEMEAINGFSKLYAMTGWRLGYVIAPPEFIRPLQKLQQNLFICAGSFVQAAGIA
ALRECDEHVAQMVATYDERRRYLLARLKTMGLATRVEPTGAFYALANVKKYTGDSYSFAFEILEKARVAVTPGIDFGRNC
EGYLRISYANSLENIKEGLDRLAEFLAGKKA

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1788722, Length=147, Percent_Identity=27.2108843537415, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 21430; Mature: 21299

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGEKNIASRARGMPPFIVMDILEKAKEMEAINGFSKLYAMTGWRLGYVIAPPEFIRPL
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
QKLQQNLFICAGSFVQAAGIAALRECDEHVAQMVATYDERRRYLLARLKTMGLATRVEPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAFYALANVKKYTGDSYSFAFEILEKARVAVTPGIDFGRNCEGYLRISYANSLENIKEGL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHH
DRLAEFLAGKKA
HHHHHHHCCCCC
>Mature Secondary Structure 
PDGEKNIASRARGMPPFIVMDILEKAKEMEAINGFSKLYAMTGWRLGYVIAPPEFIRPL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
QKLQQNLFICAGSFVQAAGIAALRECDEHVAQMVATYDERRRYLLARLKTMGLATRVEPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GAFYALANVKKYTGDSYSFAFEILEKARVAVTPGIDFGRNCEGYLRISYANSLENIKEGL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHH
DRLAEFLAGKKA
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]