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The map label for this gene is iscR [H]

Identifier: 83595124

GI number: 83595124

Start: 4345154

End: 4345609

Strand: Reverse

Name: iscR [H]

Synonym: Rru_A3795

Alternate gene names: 83595124

Gene position: 4345609-4345154 (Counterclockwise)

Preceding gene: 83595125

Following gene: 83595123

Centisome position: 99.83

GC content: 64.69

Gene sequence:

>456_bases
ATGATCAGGCTTTCCAAAAAGATGCTCTTCGCCATCGAGGCGGTGCTTGATATCGCCTATCACGCCGGCGGCGAACCGGT
GCAAAGCCGCGAGATCACCCGCCGCCAGGGCATCCCCCGGCGCTATCTGGAACAGACCCTGCAGCATCTGGTGCGCAGCG
GCGTGCTGACCGGCGTGCGCGGCCCGCGCGGCGGCTACCGGCTGGCCCGCGAACGCCGGCGCATCACCATCGGCGAAATC
GTCCGCGTCGTCCGCGACCTGGAAGCCATCGACGAGGCGGTCGATGAACTGCCCGGCTCGGATCTTGGCCGTCAGGTGGT
GCGGCCGCTGTGGAACGAATTGCACGACGAGTTGATGGTCAAGCTCGACACCCTCACCGTCGATGACCTGTGTACCCGCG
CCTATCGCGACGGCATTCCCAGCGAAGCCGAAAAGAACCTGGATTTCACCATCTGA

Upstream 100 bases:

>100_bases
AGGACGTGGTCGCCCACCGCTTGGCCGGGCGCATCGCCGCGACGCTGACCGACCGGGCCGCCGCCCCCTGCCCCTCCCCC
GCGCAGAAGGGATCTTTGGC

Downstream 100 bases:

>100_bases
CCGCGACGGCGGCGCCCGGGCGGTGTCCGGCTAAGCGGGTGGCCAAGCCCGGGAAAACGCCGGGAATCATTTGACATCGG
CCGATGCCGGTGTAAATACA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIRLSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLEQTLQHLVRSGVLTGVRGPRGGYRLARERRRITIGEI
VRVVRDLEAIDEAVDELPGSDLGRQVVRPLWNELHDELMVKLDTLTVDDLCTRAYRDGIPSEAEKNLDFTI

Sequences:

>Translated_151_residues
MIRLSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLEQTLQHLVRSGVLTGVRGPRGGYRLARERRRITIGEI
VRVVRDLEAIDEAVDELPGSDLGRQVVRPLWNELHDELMVKLDTLTVDDLCTRAYRDGIPSEAEKNLDFTI
>Mature_151_residues
MIRLSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLEQTLQHLVRSGVLTGVRGPRGGYRLARERRRITIGEI
VRVVRDLEAIDEAVDELPGSDLGRQVVRPLWNELHDELMVKLDTLTVDDLCTRAYRDGIPSEAEKNLDFTI

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=138, Percent_Identity=32.6086956521739, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17231; Mature: 17231

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLEQTLQHLVRSGVLTGVR
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
GPRGGYRLARERRRITIGEIVRVVRDLEAIDEAVDELPGSDLGRQVVRPLWNELHDELMV
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KLDTLTVDDLCTRAYRDGIPSEAEKNLDFTI
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
>Mature Secondary Structure
MIRLSKKMLFAIEAVLDIAYHAGGEPVQSREITRRQGIPRRYLEQTLQHLVRSGVLTGVR
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
GPRGGYRLARERRRITIGEIVRVVRDLEAIDEAVDELPGSDLGRQVVRPLWNELHDELMV
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KLDTLTVDDLCTRAYRDGIPSEAEKNLDFTI
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]