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The map label for this gene is ugpQ [H]

Identifier: 83595115

GI number: 83595115

Start: 4337009

End: 4337884

Strand: Direct

Name: ugpQ [H]

Synonym: Rru_A3786

Alternate gene names: 83595115

Gene position: 4337009-4337884 (Clockwise)

Preceding gene: 83595114

Following gene: 83595116

Centisome position: 99.64

GC content: 68.49

Gene sequence:

>876_bases
ATGTCCGACCGCTCTCAGACCGATCGTCCCGGTCTTTCTGGGACTCCTTCTCCCGCCTCTGGTGGCATCGCCTACCCCCC
TGTGCCCGACCGTCTGATCGGGCACAGGGGAGCCGCCGCTTCGGCGCCGGAAAACACCCTGGCCAGTTTCCAGGCCGCCG
CGGCGGCCGGAGCGCGCTGGGTTGAATTCGACGTCAAGCTGACGGCCGAAGGCGTGCCGATCGTCCTTCATGACGACACG
CTTGATCGTACGACCAACGGGCAGGGGCCGGTTGCCGCCCTCTGTCTGGCCGATCTCAAGGACCTCGACGCCGGAAGCTG
GTTTTCAGCCGACTTCGCCGGAGAACGGGTGCCGACCCTGGCGGAAACCCTCGACACCCTTGCGGTGCTCGGGCTGGGAG
CCAATATCGAACTCAAGCCCTGCCCCGGACGGACCGCCGAAACGGCGCGGGCCGCCCTGGCCGTCGCCCAAAGGCGCTGG
CCCCAGGCCGCGCCGCCCTTGGTGATTTCCAGTTTCGATCTGGACGCCTTGGCCGAAGCGGCGGCGATCGCCGCCCAGGG
GGTGATGACGCCCTGGCCGCGCGCCCTGCTGGCCGATGCCGCCGATGGCTGGACCGCCGCCCTGTTGATCGAACGCGCCC
GCGCTCTTGGCTGCGTCGGCGTTCATTTGGACGATGCGCTCGCCTCGGCCGAAACGCTGGAAACCCTGCGGGCGGCGGGC
CTGCGCCGCGCCGTCTGGACGGTGAATGACCGGTCGCGCGCCCTGGCCTTGTGGGAACAAGGTGCGGATGCCATTATTAC
CGACCGACCGGCAAGTTTGCTGGATAAAGGGGACAAAAAGGCAGGGGACGATCCCGTGGGACCGACGGGCCGGTGA

Upstream 100 bases:

>100_bases
ATCAGGTCACCGGCGCCGATTTGTCGACGCAGGCCCCCGCGGAAGAGTAACAACCCGACCGACGCGCGGAGAAGGCGTGT
CCGGCCTTAAGGGAAAGACC

Downstream 100 bases:

>100_bases
TGCCGGCGCGGTGCGGAGTGCGGAGATTTTGCCGTTTTGATTTCCATGACGGATCCATGGACAAGAAAAGCAGACGGGAA
GGGCAGCGTTCGTGAAAGAT

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSDRSQTDRPGLSGTPSPASGGIAYPPVPDRLIGHRGAAASAPENTLASFQAAAAAGARWVEFDVKLTAEGVPIVLHDDT
LDRTTNGQGPVAALCLADLKDLDAGSWFSADFAGERVPTLAETLDTLAVLGLGANIELKPCPGRTAETARAALAVAQRRW
PQAAPPLVISSFDLDALAEAAAIAAQGVMTPWPRALLADAADGWTAALLIERARALGCVGVHLDDALASAETLETLRAAG
LRRAVWTVNDRSRALALWEQGADAIITDRPASLLDKGDKKAGDDPVGPTGR

Sequences:

>Translated_291_residues
MSDRSQTDRPGLSGTPSPASGGIAYPPVPDRLIGHRGAAASAPENTLASFQAAAAAGARWVEFDVKLTAEGVPIVLHDDT
LDRTTNGQGPVAALCLADLKDLDAGSWFSADFAGERVPTLAETLDTLAVLGLGANIELKPCPGRTAETARAALAVAQRRW
PQAAPPLVISSFDLDALAEAAAIAAQGVMTPWPRALLADAADGWTAALLIERARALGCVGVHLDDALASAETLETLRAAG
LRRAVWTVNDRSRALALWEQGADAIITDRPASLLDKGDKKAGDDPVGPTGR
>Mature_290_residues
SDRSQTDRPGLSGTPSPASGGIAYPPVPDRLIGHRGAAASAPENTLASFQAAAAAGARWVEFDVKLTAEGVPIVLHDDTL
DRTTNGQGPVAALCLADLKDLDAGSWFSADFAGERVPTLAETLDTLAVLGLGANIELKPCPGRTAETARAALAVAQRRWP
QAAPPLVISSFDLDALAEAAAIAAQGVMTPWPRALLADAADGWTAALLIERARALGCVGVHLDDALASAETLETLRAAGL
RRAVWTVNDRSRALALWEQGADAIITDRPASLLDKGDKKAGDDPVGPTGR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=165, Percent_Identity=33.9393939393939, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI284055245, Length=91, Percent_Identity=43.956043956044, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI284055240, Length=91, Percent_Identity=43.956043956044, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI21361649, Length=91, Percent_Identity=43.956043956044, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI284055242, Length=91, Percent_Identity=43.956043956044, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI189571657, Length=85, Percent_Identity=41.1764705882353, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789858, Length=243, Percent_Identity=42.3868312757202, Blast_Score=161, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17542344, Length=101, Percent_Identity=40.5940594059406, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17561436, Length=106, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 30116; Mature: 29985

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRSQTDRPGLSGTPSPASGGIAYPPVPDRLIGHRGAAASAPENTLASFQAAAAAGARW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEE
VEFDVKLTAEGVPIVLHDDTLDRTTNGQGPVAALCLADLKDLDAGSWFSADFAGERVPTL
EEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHH
AETLDTLAVLGLGANIELKPCPGRTAETARAALAVAQRRWPQAAPPLVISSFDLDALAEA
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
AAIAAQGVMTPWPRALLADAADGWTAALLIERARALGCVGVHLDDALASAETLETLRAAG
HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHH
LRRAVWTVNDRSRALALWEQGADAIITDRPASLLDKGDKKAGDDPVGPTGR
HHHEEEEECCCCCEEHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRSQTDRPGLSGTPSPASGGIAYPPVPDRLIGHRGAAASAPENTLASFQAAAAAGARW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEE
VEFDVKLTAEGVPIVLHDDTLDRTTNGQGPVAALCLADLKDLDAGSWFSADFAGERVPTL
EEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCHHH
AETLDTLAVLGLGANIELKPCPGRTAETARAALAVAQRRWPQAAPPLVISSFDLDALAEA
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
AAIAAQGVMTPWPRALLADAADGWTAALLIERARALGCVGVHLDDALASAETLETLRAAG
HHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHH
LRRAVWTVNDRSRALALWEQGADAIITDRPASLLDKGDKKAGDDPVGPTGR
HHHEEEEECCCCCEEHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]