| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595078
Identifier: 83595078
GI number: 83595078
Start: 4297400
End: 4298584
Strand: Direct
Name: 83595078
Synonym: Rru_A3749
Alternate gene names: NA
Gene position: 4297400-4298584 (Clockwise)
Preceding gene: 83595077
Following gene: 83595079
Centisome position: 98.73
GC content: 59.66
Gene sequence:
>1185_bases GTGCTGATCAAATCGATCAAACTGACCAATATCCTGAGCTTCGGCGAGGCGGCCGAGACCATCGAGCTTCGCCCGCTCAA TGTGGTGATCGGCCCCAATGGTTCGGGAAAATCGAACCTGATCGCGGCGATCGAGCTGTTTCGCGCCTTGCCAAAGGACG CGCCCGCCTTCTTTCGGAGGGAGGGCGGTATCCATGATTGGTTGTGGAAGGGGGGCGAAATCCCCCCGGTGGCGACCATT GAGAGTGTCTTCGACGAAAAAGGCCCCTTGAGCGGCCTGCGGTATGCCCTGCGCTTCACGGTGGTCGGTCAGCATTTCGA GATCATCGAGGAACGGATCGAAGAGGAAGCCGCTGAAGGTGCTCAGACGCCTCCCCCGTACCATTTCAAGGATGGCCGCG GTGCTCTCAGAGCTCTCCTAGCCAATGAGGGAGAGATTAAGGCTTGGTCCTTTGTCATTCCGAGTGAGATCGATCCGACC CAATCTATCCTGGCCCAGCGCAAGGATCCCCATCAATACCCCGAACTTACTTCCCTCGGGGCGGTCCTTCCGACAATGCG CTGCTATCGCGAGTGGACCATGGGGCCGCAGAGCCCGCCACGCCAAGACCAGAAGACCGATCTTCGCAACGATTATCTCG ACCCTTATGGCGCCGGCAATCTGGCCTTGGTTCTGCAGCGGTTGGGCAATAAGCCCGCGCTCAAGAAACGCTTCCTGGAA GCCCTTCGCCTTCTCTACGAGGGAATCGATGATTACGGCGTGACGATCGAAGGCGGAACCTCGCAGATTTTTTTCCACGA AGGCGGGCGTTTTACCATCCCGGCGAGCCGGCTTTCCGATGGCACCCTACGCTATCTGTGTTTGCTGGCCATCCTTCTCG ATCCCGCGCCGCCGCCGCTTCTGTGTATCGAAGAGCCGGAATTGGGGCTCCATCCCGATATTCTGCCGACCCTCGCCGAT CTGCTCAAAGAGGCGTCGGAACGGACCCAGGTGATCGTGACCACCCATTCCGACGGGCTGGTCGACGCCATGACCGATCG GCCCGAAGCCGTGCTGATCGCCGAAAAAAACGAAAACGGAACCACCCTGACCCGGCTTGATGGCGAAACGCTCAAGCCCT GGCTGGCGAAATATCGCCTGGGCGAGCTTTGGACCCGTGGTGGAATCGGCGGCACGCGATGGTGA
Upstream 100 bases:
>100_bases TCCGCTTCAACGTCTAAGGACTATTGGCCGATCTCGGCATCGTTGAGGTCGGCCAAGCATCTGAACACGGCCGTTTTAAG CTAGGCTGAAGGAGGGCGCG
Downstream 100 bases:
>100_bases AACTGTTCGTCGAGGGCGGTGGCGGTCACGAAGCCGCCTGCCGGCAGGCTTTCGCCACCTTCCTCAGCCGCGCCGGTCTG TCCAAAAAGCCCCGGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; ATPase; ATPase RecF-Like Protein; ATPase-Like Protein; RecF Protein; DNA Replication And Repair Protein RecF
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPAFFRREGGIHDWLWKGGEIPPVATI ESVFDEKGPLSGLRYALRFTVVGQHFEIIEERIEEEAAEGAQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPT QSILAQRKDPHQYPELTSLGAVLPTMRCYREWTMGPQSPPRQDQKTDLRNDYLDPYGAGNLALVLQRLGNKPALKKRFLE ALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFTIPASRLSDGTLRYLCLLAILLDPAPPPLLCIEEPELGLHPDILPTLAD LLKEASERTQVIVTTHSDGLVDAMTDRPEAVLIAEKNENGTTLTRLDGETLKPWLAKYRLGELWTRGGIGGTRW
Sequences:
>Translated_394_residues MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPAFFRREGGIHDWLWKGGEIPPVATI ESVFDEKGPLSGLRYALRFTVVGQHFEIIEERIEEEAAEGAQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPT QSILAQRKDPHQYPELTSLGAVLPTMRCYREWTMGPQSPPRQDQKTDLRNDYLDPYGAGNLALVLQRLGNKPALKKRFLE ALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFTIPASRLSDGTLRYLCLLAILLDPAPPPLLCIEEPELGLHPDILPTLAD LLKEASERTQVIVTTHSDGLVDAMTDRPEAVLIAEKNENGTTLTRLDGETLKPWLAKYRLGELWTRGGIGGTRW >Mature_394_residues MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPAFFRREGGIHDWLWKGGEIPPVATI ESVFDEKGPLSGLRYALRFTVVGQHFEIIEERIEEEAAEGAQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPT QSILAQRKDPHQYPELTSLGAVLPTMRCYREWTMGPQSPPRQDQKTDLRNDYLDPYGAGNLALVLQRLGNKPALKKRFLE ALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFTIPASRLSDGTLRYLCLLAILLDPAPPPLLCIEEPELGLHPDILPTLAD LLKEASERTQVIVTTHSDGLVDAMTDRPEAVLIAEKNENGTTLTRLDGETLKPWLAKYRLGELWTRGGIGGTRW
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43676; Mature: 43676
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPAFFRR CCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHH EGGIHDWLWKGGEIPPVATIESVFDEKGPLSGLRYALRFTVVGQHFEIIEERIEEEAAEG CCCCHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPTQSILAQRKDPHQYPELTSLG CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHH AVLPTMRCYREWTMGPQSPPRQDQKTDLRNDYLDPYGAGNLALVLQRLGNKPALKKRFLE HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHH ALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFTIPASRLSDGTLRYLCLLAILLDPAPPPL HHHHHHHCCCCCCEEEECCCCEEEEECCCEEEECHHHCCCCHHHHHHHHHHHHCCCCCCE LCIEEPELGLHPDILPTLADLLKEASERTQVIVTTHSDGLVDAMTDRPEAVLIAEKNENG EEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCC TTLTRLDGETLKPWLAKYRLGELWTRGGIGGTRW CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLIKSIKLTNILSFGEAAETIELRPLNVVIGPNGSGKSNLIAAIELFRALPKDAPAFFRR CCCCHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHH EGGIHDWLWKGGEIPPVATIESVFDEKGPLSGLRYALRFTVVGQHFEIIEERIEEEAAEG CCCCHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AQTPPPYHFKDGRGALRALLANEGEIKAWSFVIPSEIDPTQSILAQRKDPHQYPELTSLG CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHH AVLPTMRCYREWTMGPQSPPRQDQKTDLRNDYLDPYGAGNLALVLQRLGNKPALKKRFLE HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHH ALRLLYEGIDDYGVTIEGGTSQIFFHEGGRFTIPASRLSDGTLRYLCLLAILLDPAPPPL HHHHHHHCCCCCCEEEECCCCEEEEECCCEEEECHHHCCCCHHHHHHHHHHHHCCCCCCE LCIEEPELGLHPDILPTLADLLKEASERTQVIVTTHSDGLVDAMTDRPEAVLIAEKNENG EEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCC TTLTRLDGETLKPWLAKYRLGELWTRGGIGGTRW CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA