| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83595066
Identifier: 83595066
GI number: 83595066
Start: 4286428
End: 4287762
Strand: Direct
Name: 83595066
Synonym: Rru_A3737
Alternate gene names: NA
Gene position: 4286428-4287762 (Clockwise)
Preceding gene: 83595065
Following gene: 83595069
Centisome position: 98.47
GC content: 35.36
Gene sequence:
>1335_bases ATGGGCAGAATTGTTCCTTCTGTAAAAATAGGCGATGATGAAGGCTTCACCGAAAATGATCTCTTTGGATATAGAGAGTT TGGAGAGAAGTTTTCCTCTCTTGTTTGTGAATTTGATCAACCATTAACCATTATTCTGGACGGCCCTTGGGGAAGCGGAA AGACTACATTTATTAAGCAATGGGCCGGTCATTTGAGAAAAGAGAAAAAGGTTCCGGTGATTTATTATGACGCATTTTCT AATGATTATCATGATGATGCTTTTATTTCGATAACATCGGAAATAATTGATTTTGCGAAAAATATATCTGAAGAAAAGGC CGAAAATTTTCTTCGCGTTGCAATAAAGGTTGGTACTTCCTTAATCCCGATCGCAGTGAAGACCTCCCTGAAAATAGCAA CACTAGGTTTTGTGAATGGCGCAGAGCTATCTGACTCTCTTGCCGAGGTAATTAAAGAAGGTGTGGCAGAGAGTAGTGAG CTTAGTGCGGATTATTTGGAAAAACTCATTGGGGAAAAGCTGGAGGGCGCTAAGCAACAGAAAGAAGTTATTAAAAAATT TAGGGAATGCCTTGAAAAGCTTTCCCGAGAATTGGCTAATTCAGGTGAGGATTGTGAAGATAAAAAGCCTCTAGTTTTTA TCATTGATGAGCTGGATCGCTGCAAACCATCATTCGCATTGGATGTTATCGAGGGAATAAAACACTTATTTTCTGTCGAT GGTGTTGTCTTTGTTGTCGTGACGAATCTAAAACAAATGGAGGCTGCGGTTCGTGGATGTTATGGAGCAGATACGAACGG GAATCTGTATCTAGAAAAATTTTATGATATTCGAATAAATCTCCCTATAAATAGTAATTATGAAATAGAAGCTATTCATA AATATATTAATTATGCTTGTAAAGGACATCCAATAGATAGTCGCATGAAAGACGAAATAAAAAAAATAGCAATAGCAAAA ACAATAAATTTTAGAACAATCGATAAAATAATAAATTCTTTATCTATTGCTAATTATATGGAAATGAGTTCTTCGCCAGT TATTAAAATTTTAATAACTGGCCTCTCCATTGTTCGCCATATTGACAGTGATCTTTATAGAAAGGCCCGTGTTGGTGGTC TTTCTTGGGAAGAAGTAAATAATTTTTTTGGATTCGAAGAATGGCCCGAGAAAGATTGGGAATATTCAATTAAATTATGG AAATTTTTCACAGGAAAAGAATCTGATTTAGAAAATAAACTTAAATTCGAACACCCAATAGATAAAGGGCAGGATTTCCA AAAAATTGGAACTAAAATTCTAGATAGCTTTAGGTTATCTAAAGAGATTGATTGA
Upstream 100 bases:
>100_bases ATTGTTTTGAAGGAGAGCTATACCGTGCGCAGCGTGCGTCCTTGTCGGCTCGCAACCAAAGAGATATTTTAATGCTCTGA GGCAATCCGGAGAGTTAATT
Downstream 100 bases:
>100_bases AGAGGTGATCTATTTATTATTTCCCTCCCCCTTGAGCCGCGCCAAGGGGTGGGCGGTGCGGACCAGGGTGGTCAGGCGGT CGTCGAGGACGTGGGTGTAG
Product: KAP P-loop
Products: NA
Alternate protein names: KAP P-Loop; P-Loop ATPase; KAP P-Loop Domain Protein; Kap P-Loop Domain Protein; KAP Family P-Loop Domain Protein; KAP Family P-Loop Domain-Containing Protein; Phage T7 Exclusion Protein
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MGRIVPSVKIGDDEGFTENDLFGYREFGEKFSSLVCEFDQPLTIILDGPWGSGKTTFIKQWAGHLRKEKKVPVIYYDAFS NDYHDDAFISITSEIIDFAKNISEEKAENFLRVAIKVGTSLIPIAVKTSLKIATLGFVNGAELSDSLAEVIKEGVAESSE LSADYLEKLIGEKLEGAKQQKEVIKKFRECLEKLSRELANSGEDCEDKKPLVFIIDELDRCKPSFALDVIEGIKHLFSVD GVVFVVVTNLKQMEAAVRGCYGADTNGNLYLEKFYDIRINLPINSNYEIEAIHKYINYACKGHPIDSRMKDEIKKIAIAK TINFRTIDKIINSLSIANYMEMSSSPVIKILITGLSIVRHIDSDLYRKARVGGLSWEEVNNFFGFEEWPEKDWEYSIKLW KFFTGKESDLENKLKFEHPIDKGQDFQKIGTKILDSFRLSKEID
Sequences:
>Translated_444_residues MGRIVPSVKIGDDEGFTENDLFGYREFGEKFSSLVCEFDQPLTIILDGPWGSGKTTFIKQWAGHLRKEKKVPVIYYDAFS NDYHDDAFISITSEIIDFAKNISEEKAENFLRVAIKVGTSLIPIAVKTSLKIATLGFVNGAELSDSLAEVIKEGVAESSE LSADYLEKLIGEKLEGAKQQKEVIKKFRECLEKLSRELANSGEDCEDKKPLVFIIDELDRCKPSFALDVIEGIKHLFSVD GVVFVVVTNLKQMEAAVRGCYGADTNGNLYLEKFYDIRINLPINSNYEIEAIHKYINYACKGHPIDSRMKDEIKKIAIAK TINFRTIDKIINSLSIANYMEMSSSPVIKILITGLSIVRHIDSDLYRKARVGGLSWEEVNNFFGFEEWPEKDWEYSIKLW KFFTGKESDLENKLKFEHPIDKGQDFQKIGTKILDSFRLSKEID >Mature_443_residues GRIVPSVKIGDDEGFTENDLFGYREFGEKFSSLVCEFDQPLTIILDGPWGSGKTTFIKQWAGHLRKEKKVPVIYYDAFSN DYHDDAFISITSEIIDFAKNISEEKAENFLRVAIKVGTSLIPIAVKTSLKIATLGFVNGAELSDSLAEVIKEGVAESSEL SADYLEKLIGEKLEGAKQQKEVIKKFRECLEKLSRELANSGEDCEDKKPLVFIIDELDRCKPSFALDVIEGIKHLFSVDG VVFVVVTNLKQMEAAVRGCYGADTNGNLYLEKFYDIRINLPINSNYEIEAIHKYINYACKGHPIDSRMKDEIKKIAIAKT INFRTIDKIINSLSIANYMEMSSSPVIKILITGLSIVRHIDSDLYRKARVGGLSWEEVNNFFGFEEWPEKDWEYSIKLWK FFTGKESDLENKLKFEHPIDKGQDFQKIGTKILDSFRLSKEID
Specific function: Unknown
COG id: COG4928
COG function: function code R; Predicted P-loop ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50434; Mature: 50303
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIVPSVKIGDDEGFTENDLFGYREFGEKFSSLVCEFDQPLTIILDGPWGSGKTTFIKQ CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH WAGHLRKEKKVPVIYYDAFSNDYHDDAFISITSEIIDFAKNISEEKAENFLRVAIKVGTS HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC LIPIAVKTSLKIATLGFVNGAELSDSLAEVIKEGVAESSELSADYLEKLIGEKLEGAKQQ EEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH KEVIKKFRECLEKLSRELANSGEDCEDKKPLVFIIDELDRCKPSFALDVIEGIKHLFSVD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCC GVVFVVVTNLKQMEAAVRGCYGADTNGNLYLEKFYDIRINLPINSNYEIEAIHKYINYAC CEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHC KGHPIDSRMKDEIKKIAIAKTINFRTIDKIINSLSIANYMEMSSSPVIKILITGLSIVRH CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IDSDLYRKARVGGLSWEEVNNFFGFEEWPEKDWEYSIKLWKFFTGKESDLENKLKFEHPI HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHCCCCCCCC DKGQDFQKIGTKILDSFRLSKEID CCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRIVPSVKIGDDEGFTENDLFGYREFGEKFSSLVCEFDQPLTIILDGPWGSGKTTFIKQ CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH WAGHLRKEKKVPVIYYDAFSNDYHDDAFISITSEIIDFAKNISEEKAENFLRVAIKVGTS HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC LIPIAVKTSLKIATLGFVNGAELSDSLAEVIKEGVAESSELSADYLEKLIGEKLEGAKQQ EEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHH KEVIKKFRECLEKLSRELANSGEDCEDKKPLVFIIDELDRCKPSFALDVIEGIKHLFSVD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCC GVVFVVVTNLKQMEAAVRGCYGADTNGNLYLEKFYDIRINLPINSNYEIEAIHKYINYAC CEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHC KGHPIDSRMKDEIKKIAIAKTINFRTIDKIINSLSIANYMEMSSSPVIKILITGLSIVRH CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IDSDLYRKARVGGLSWEEVNNFFGFEEWPEKDWEYSIKLWKFFTGKESDLENKLKFEHPI HHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHCCCCCCCC DKGQDFQKIGTKILDSFRLSKEID CCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA