| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is aroK
Identifier: 83595069
GI number: 83595069
Start: 4290807
End: 4291373
Strand: Direct
Name: aroK
Synonym: Rru_A3740
Alternate gene names: 83595069
Gene position: 4290807-4291373 (Clockwise)
Preceding gene: 83595066
Following gene: 83595070
Centisome position: 98.58
GC content: 66.31
Gene sequence:
>567_bases ATGATTGAAGCCGAGGAAAACACCCTGGCACTGCCGCGCACCCTGGTTCTGGTCGGGCTGATGGGGGCGGGCAAAACCTG TATCGGCCGCCGTCTGGCCCAGATGGCCGGGGTGCCGTTCGTCGATGCCGATGTCGAGATCGAGCGCGCCGCCAAACGCA CCATCGCCGAGATCTTCGCCACCTATGGCGAAAGCGAATTCCGCGCCCTGGAGCGGCGGGTGATGGCCCGGTTGCTGGCG GGGCGCACCTGCGTGCTGGCCACCGGCGGCGGCGCCTTCATGGCCGAAGACACCCGCGCCCTAATCCGCCTTCACGGGTT ATCCTTGTGGCTGCGCGCCGATCTTGATCTTCTGGTCGCCCGCACCGCCGGACGAACCCACCGGCCGCTGCTCAATAACG GCGACGCGCGCGAAAAACTGGCCGAGCTGATGGCCAAGCGTCATCCTGTCTATGCCGAGGCCGATATCGTTTTCGATGCC CTTGACGAAAGCCAGGACGCCTCCGCCCTGCGGGTGCGCTCGTGCCTTCTTTCCTACCTCGCCGACCATGCGGAGACCGC CCCGTGA
Upstream 100 bases:
>100_bases GAGGAAGGCAGTGTACCGGCTCCGTCGCGGGCGATCAACGTCGCCCGCCGTCCGTATCCGCGCCCCTCGTCGGGGGGTGG CGATGAGAGGGATTGGCCGA
Downstream 100 bases:
>100_bases GCCCAGACACAGCCGCCGATGCCGCCGCCGACCCCGCCTTGCAGTCGTCCGTTCTGACCGTTTCCCTGGGCGAGCGCAGC TATCCCATTCATATCGGCCC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIEAEENTLALPRTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRTIAEIFATYGESEFRALERRVMARLLA GRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVARTAGRTHRPLLNNGDAREKLAELMAKRHPVYAEADIVFDA LDESQDASALRVRSCLLSYLADHAETAP
Sequences:
>Translated_188_residues MIEAEENTLALPRTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRTIAEIFATYGESEFRALERRVMARLLA GRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVARTAGRTHRPLLNNGDAREKLAELMAKRHPVYAEADIVFDA LDESQDASALRVRSCLLSYLADHAETAP >Mature_188_residues MIEAEENTLALPRTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRTIAEIFATYGESEFRALERRVMARLLA GRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVARTAGRTHRPLLNNGDAREKLAELMAKRHPVYAEADIVFDA LDESQDASALRVRSCLLSYLADHAETAP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=172, Percent_Identity=36.6279069767442, Blast_Score=101, Evalue=2e-23, Organism=Escherichia coli, GI1786587, Length=166, Percent_Identity=33.1325301204819, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_RHORT (Q2RMW1)
Other databases:
- EMBL: CP000230 - RefSeq: YP_428821.1 - ProteinModelPortal: Q2RMW1 - SMR: Q2RMW1 - STRING: Q2RMW1 - GeneID: 3837197 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A3740 - NMPDR: fig|1085.1.peg.1174 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: Q2RMW1 - ProtClustDB: CLSK2397428 - BioCyc: RRUB269796:RRU_A3740-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20516; Mature: 20516
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 44-44 BINDING 68-68 BINDING 90-90 BINDING 128-128 BINDING 147-147
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAEENTLALPRTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRTIAEIFA CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH TYGESEFRALERRVMARLLAGRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVA HHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHH RTAGRTHRPLLNNGDAREKLAELMAKRHPVYAEADIVFDALDESQDASALRVRSCLLSYL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH ADHAETAP HHHCCCCC >Mature Secondary Structure MIEAEENTLALPRTLVLVGLMGAGKTCIGRRLAQMAGVPFVDADVEIERAAKRTIAEIFA CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH TYGESEFRALERRVMARLLAGRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLLVA HHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHH RTAGRTHRPLLNNGDAREKLAELMAKRHPVYAEADIVFDALDESQDASALRVRSCLLSYL HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH ADHAETAP HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA