| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595039
Identifier: 83595039
GI number: 83595039
Start: 4260385
End: 4261041
Strand: Reverse
Name: 83595039
Synonym: Rru_A3710
Alternate gene names: NA
Gene position: 4261041-4260385 (Counterclockwise)
Preceding gene: 83595040
Following gene: 83595038
Centisome position: 97.89
GC content: 65.91
Gene sequence:
>657_bases ATGAGTGCCAGCGTCTTCCAGCCGCGTTTTGCCGCCCTGCCACGCGAGGTGGCGGTCTTTCCCCTGCCCGGAGCCCTTTT GCTTCCCGGCGGGCATCTGCCGCTCAATATTTTCGAGCCGCGCTATCTGGAAATGACCTTCGACGCCCTGGGCGCCGGAC GGATGTTCGCCATGATCCAGCCCCGCGATCCCGAGGAGGACCCCTCGCCGCTCTATTCGGTGGCTTGCCTGGGGCGCATC GTCCGCTTCGCCGAAACCGATGACGGCCGGCTGCTGGTCACCCTGGAAGGGGTGAGCCGCTTCCTGGTCGGGGAGGAATT GCCCCTCTATAAGGGCTATCGCCGGGTCGAGGCCGATTACGGCCCCTATGCCGACGACCTTACTCCGCCGCCGGCCACCC TGGGTCTTGATCGCCCCGGGCTGTTCGAGGCGCTGAAGGCCTATGCCGCCCGCCACGAACTGAGTTTCAACTGGAAAGCC ATCGAAGAGGTGCCCGAACCGGCCCTGGTCAATTCGCTGGCCATGGCCTGCCCCTTCGAGCCCAGCGAGAAGCAGGCGCT GCTGGAAGCCGAAACCCCGTCGCAACGGGCCGAACTGCTGACCGGCCTGCTGCGCATCGGCGCGGCTTCCTCTTTAATGG GCGGCACAACCCAGTAG
Upstream 100 bases:
>100_bases GTCGGCGGTCGGCGCAAGCTAAGCTCCATCTTGTTTTCCTGATCAGAAATCCGGGGCGACCGGCGGCTGGGCCGCCGGAC CCCGGTTGGAGGGGTATGCG
Downstream 100 bases:
>100_bases AATGGCCCGCCCCGCTTTCCCCACTCCCCGCGTTCTCGCCAAAGGATCGATGCCGATGACCACCACCCGCCCGACCGACC CCAAGCTGCTGGAGCTTCTG
Product: peptidase S16, lon-like
Products: NA
Alternate protein names: ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease La; ATP-Dependent Protease; ATP-Dependent Protease La Domain Subfamily; Peptidase S; ATP-Dependent La Family Protease; ATP-Dependent Proteinase; ATP-Dependent Protease LA 2 Protein; Lon-Like ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein LonD; Lon-Like Peptidase; ATP-Dependent Protease Lon; ATP-Dependent Protease Family Protein; Lon Family ATP-Dependent Protease; S16 Family Peptidase; ATP-Dependent Endopeptidase Lon
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSASVFQPRFAALPREVAVFPLPGALLLPGGHLPLNIFEPRYLEMTFDALGAGRMFAMIQPRDPEEDPSPLYSVACLGRI VRFAETDDGRLLVTLEGVSRFLVGEELPLYKGYRRVEADYGPYADDLTPPPATLGLDRPGLFEALKAYAARHELSFNWKA IEEVPEPALVNSLAMACPFEPSEKQALLEAETPSQRAELLTGLLRIGAASSLMGGTTQ
Sequences:
>Translated_218_residues MSASVFQPRFAALPREVAVFPLPGALLLPGGHLPLNIFEPRYLEMTFDALGAGRMFAMIQPRDPEEDPSPLYSVACLGRI VRFAETDDGRLLVTLEGVSRFLVGEELPLYKGYRRVEADYGPYADDLTPPPATLGLDRPGLFEALKAYAARHELSFNWKA IEEVPEPALVNSLAMACPFEPSEKQALLEAETPSQRAELLTGLLRIGAASSLMGGTTQ >Mature_217_residues SASVFQPRFAALPREVAVFPLPGALLLPGGHLPLNIFEPRYLEMTFDALGAGRMFAMIQPRDPEEDPSPLYSVACLGRIV RFAETDDGRLLVTLEGVSRFLVGEELPLYKGYRRVEADYGPYADDLTPPPATLGLDRPGLFEALKAYAARHELSFNWKAI EEVPEPALVNSLAMACPFEPSEKQALLEAETPSQRAELLTGLLRIGAASSLMGGTTQ
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23790; Mature: 23658
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVFQPRFAALPREVAVFPLPGALLLPGGHLPLNIFEPRYLEMTFDALGAGRMFAMIQ CCCCCCCCHHHHCCCCEEEEECCCEEECCCCCCCEEECCCEEEEEEHHHCCCCCEEEEEC PRDPEEDPSPLYSVACLGRIVRFAETDDGRLLVTLEGVSRFLVGEELPLYKGYRRVEADY CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHCHHHCCCCC GPYADDLTPPPATLGLDRPGLFEALKAYAARHELSFNWKAIEEVPEPALVNSLAMACPFE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCC PSEKQALLEAETPSQRAELLTGLLRIGAASSLMGGTTQ CCCHHEEEECCCCHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure SASVFQPRFAALPREVAVFPLPGALLLPGGHLPLNIFEPRYLEMTFDALGAGRMFAMIQ CCCCCCCHHHHCCCCEEEEECCCEEECCCCCCCEEECCCEEEEEEHHHCCCCCEEEEEC PRDPEEDPSPLYSVACLGRIVRFAETDDGRLLVTLEGVSRFLVGEELPLYKGYRRVEADY CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCHHHCHHHCCCCC GPYADDLTPPPATLGLDRPGLFEALKAYAARHELSFNWKAIEEVPEPALVNSLAMACPFE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCC PSEKQALLEAETPSQRAELLTGLLRIGAASSLMGGTTQ CCCHHEEEECCCCHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA