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The map label for this gene is ycgM [C]

Identifier: 83595026

GI number: 83595026

Start: 4243568

End: 4244269

Strand: Reverse

Name: ycgM [C]

Synonym: Rru_A3697

Alternate gene names: 83595026

Gene position: 4244269-4243568 (Counterclockwise)

Preceding gene: 83595027

Following gene: 83595025

Centisome position: 97.51

GC content: 69.23

Gene sequence:

>702_bases
GTGCGCTTCGTTCTTCCTCCCTTGCCCCGCACGGCCATTCCGGTAAGCGGAACCGACGGTTTCTTCCCGGTGGGCCGGGT
GTTCTGCGTCGGCCGCAACTACGCCGACCACGCCCGCGAGATGGGCGGCGATCCGCATAAGGAGCCGCCGTTCTTCTTTT
CCAAGCCGGGGGACGCGGTGGTGCCGCTGGGCGGCGCCGTGCCCTATCCCCAGGCGACCTCGAACCTCCATCACGAGGTC
GAACTGGTGGTGGCCCTGGGCGGCGGCGGCCATGACATCGCCCCCGATAAGGCCCTCGATCTGGTCTGGGGCTATGCGGT
GGGGATCGATCTGACGCGGCGCGACCTGCAAGACAGCGCCAAGAGGGCCGGCCGCCCCTGGGATATGGCCAAGGGCTTCG
AAGCCAGCGGCCCGGTCGGGGCGATCACCCCGGCGGCGACCACCGGCGCGCTGACCTCGGGCGCCATCAGCCTTTCGGTC
AATGGCGTTCCCCGCCAGACGGGCGATCTGAAGGATATGATCTGGCCGGTCAGCGATGTCATTTCCTTCCTGTCCCGGCT
GATGGTGCTGCGCCCGGGCGACCTGATCTTCACCGGCACGCCGGCCGGCGTCGGCCCGGTGGAGGAAGGCGACGAGCTGA
GGGCCGAAATCGCTGGCCTCGACCCGCTCACCCTCACCCTCGTCGCCGGACCGGTCCTCTGA

Upstream 100 bases:

>100_bases
CGTCCTATAGTCGGCCCCCCTGACGGCCGCCGATCCCCCGGGATCTCGCCGGGCCGATCCGCCCTCCCTCAAGGAGAGCC
CTCCCTCAAGGAGAGATCGC

Downstream 100 bases:

>100_bases
GCCCCCCGGCTTCGCTCCGACCGCTGGCGATCGCCACCTGGAACATCAACTCGCTGCGCCTGCGCCTGGATCAGGTGGCG
CGGCTGGTTGAAAGCCGGGC

Product: fumarylacetoacetate (FAA) hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRFVLPPLPRTAIPVSGTDGFFPVGRVFCVGRNYADHAREMGGDPHKEPPFFFSKPGDAVVPLGGAVPYPQATSNLHHEV
ELVVALGGGGHDIAPDKALDLVWGYAVGIDLTRRDLQDSAKRAGRPWDMAKGFEASGPVGAITPAATTGALTSGAISLSV
NGVPRQTGDLKDMIWPVSDVISFLSRLMVLRPGDLIFTGTPAGVGPVEEGDELRAEIAGLDPLTLTLVAGPVL

Sequences:

>Translated_233_residues
MRFVLPPLPRTAIPVSGTDGFFPVGRVFCVGRNYADHAREMGGDPHKEPPFFFSKPGDAVVPLGGAVPYPQATSNLHHEV
ELVVALGGGGHDIAPDKALDLVWGYAVGIDLTRRDLQDSAKRAGRPWDMAKGFEASGPVGAITPAATTGALTSGAISLSV
NGVPRQTGDLKDMIWPVSDVISFLSRLMVLRPGDLIFTGTPAGVGPVEEGDELRAEIAGLDPLTLTLVAGPVL
>Mature_233_residues
MRFVLPPLPRTAIPVSGTDGFFPVGRVFCVGRNYADHAREMGGDPHKEPPFFFSKPGDAVVPLGGAVPYPQATSNLHHEV
ELVVALGGGGHDIAPDKALDLVWGYAVGIDLTRRDLQDSAKRAGRPWDMAKGFEASGPVGAITPAATTGALTSGAISLSV
NGVPRQTGDLKDMIWPVSDVISFLSRLMVLRPGDLIFTGTPAGVGPVEEGDELRAEIAGLDPLTLTLVAGPVL

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=208, Percent_Identity=43.75, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI66348062, Length=208, Percent_Identity=44.7115384615385, Blast_Score=171, Evalue=5e-43,
Organism=Homo sapiens, GI215422413, Length=201, Percent_Identity=44.7761194029851, Blast_Score=171, Evalue=6e-43,
Organism=Homo sapiens, GI156231349, Length=228, Percent_Identity=34.6491228070175, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI40786394, Length=228, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1787428, Length=199, Percent_Identity=41.7085427135678, Blast_Score=158, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17557057, Length=186, Percent_Identity=36.0215053763441, Blast_Score=133, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6324161, Length=224, Percent_Identity=32.1428571428571, Blast_Score=131, Evalue=9e-32,
Organism=Drosophila melanogaster, GI28572127, Length=216, Percent_Identity=36.1111111111111, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28571789, Length=228, Percent_Identity=32.0175438596491, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24663695, Length=218, Percent_Identity=27.9816513761468, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24381; Mature: 24381

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVLPPLPRTAIPVSGTDGFFPVGRVFCVGRNYADHAREMGGDPHKEPPFFFSKPGDAV
CCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCEE
VPLGGAVPYPQATSNLHHEVELVVALGGGGHDIAPDKALDLVWGYAVGIDLTRRDLQDSA
EECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KRAGRPWDMAKGFEASGPVGAITPAATTGALTSGAISLSVNGVPRQTGDLKDMIWPVSDV
HHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCHHHH
ISFLSRLMVLRPGDLIFTGTPAGVGPVEEGDELRAEIAGLDPLTLTLVAGPVL
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC
>Mature Secondary Structure
MRFVLPPLPRTAIPVSGTDGFFPVGRVFCVGRNYADHAREMGGDPHKEPPFFFSKPGDAV
CCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCEE
VPLGGAVPYPQATSNLHHEVELVVALGGGGHDIAPDKALDLVWGYAVGIDLTRRDLQDSA
EECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KRAGRPWDMAKGFEASGPVGAITPAATTGALTSGAISLSVNGVPRQTGDLKDMIWPVSDV
HHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCHHHH
ISFLSRLMVLRPGDLIFTGTPAGVGPVEEGDELRAEIAGLDPLTLTLVAGPVL
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]