Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 83595022

GI number: 83595022

Start: 4238440

End: 4239363

Strand: Reverse

Name: rsmI [H]

Synonym: Rru_A3693

Alternate gene names: 83595022

Gene position: 4239363-4238440 (Counterclockwise)

Preceding gene: 83595025

Following gene: 83595021

Centisome position: 97.39

GC content: 71.1

Gene sequence:

>924_bases
TTGTCAGACACCATATCCGATCAACAGCCTACTCATGCTCCCCCCGGAAGGCAATTGGCGCCCGGCCTTCATCTGGTGGG
AACGCCGATTGGCAACATGGGCGACATCTCGGCCCGGGCCATCGACGCCCTGGCCGGAGCCGATCTGGTGGCCTGCGAGG
ATACCCGGGTGACCGGCGGCTTGCTCCATCGCTTGGGGGTGTCGGCCAAGCTGACGCCCTATCACGAGCATAACGCCGAT
GCCGCCCGCCCGGCCCTGCTGGCGAAATTGGCCGAGGGCGCGGCGATCGTTCTGGTTTCGGATGCCGGCATGCCGCTGGT
CTCCGATCCCGGCTATCGGCTGGTGCGGGCCTGCCACGAGGCGGGAATCCGCGTCACCGCCGTTCCCGGCCCCTCGGCGG
TGCTGACGGCCCTCGCCCTGGCCGGCCTGCCCACCGACCGCTTCCAGTTCGTCGGCTTCCCGCCGCCCAAGCCCGGCAAA
CTTGGCACCTTCTGCGCCGAGTTGGCCGAGGTGCGGGCGACCCTGGTGCTGTTCGAGGGGGTATCGCGCCTTGATCGCAC
CCTGGCCGCCCTGGCCAAGGCCTTGGGCGACCGCGAGGCCGCCGTCTGCCGCGAATTGACCAAGCTGCACGAGGAGGTAC
GGCGCGGCACCCTTGATACCCTCGCCGCCCATTACGCCGAGGCCGGCCCGCCCAAGGGCGAGGCGGTGATCGTCATCGCC
CCGCCCGATGCCGCCGCCCCGCCCTCGGCCGGGGTTCTGGACGACCGCCTGCGCCAGTTGCTGGATGCCGGCGAAAGCGT
GCGCTCGGCCGCCGAGCGTCTGGCGGCGGAAAGCGGCGTCGCCCGCCGCGCGCTCTATCGACGCGCCCTGGAGCTGGCCG
GCAAGGCCGATGCCGAAGATCGCGAAAGGCCGGGGGAGCGGTGA

Upstream 100 bases:

>100_bases
GCGGCAAGGCCAAGACCGAGGGCCGCGATTATCGCCATGCGGACGGAGCGCCAGCCCCGGTTCCGCGTCATTTCACAGCC
ATCCACCGGTGACCCTCCCC

Downstream 100 bases:

>100_bases
GGCGGTCGCGGCGCCAGGGGGAACGCCGGGGGCGCTGGGCCGAAAGCCTGTGCGTATGGTGGCTGCGCCTGCACGGCTGG
CGCATCCTTGCCCGCCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSDTISDQQPTHAPPGRQLAPGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGGLLHRLGVSAKLTPYHEHNAD
AARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHEAGIRVTAVPGPSAVLTALALAGLPTDRFQFVGFPPPKPGK
LGTFCAELAEVRATLVLFEGVSRLDRTLAALAKALGDREAAVCRELTKLHEEVRRGTLDTLAAHYAEAGPPKGEAVIVIA
PPDAAAPPSAGVLDDRLRQLLDAGESVRSAAERLAAESGVARRALYRRALELAGKADAEDRERPGER

Sequences:

>Translated_307_residues
MSDTISDQQPTHAPPGRQLAPGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGGLLHRLGVSAKLTPYHEHNAD
AARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHEAGIRVTAVPGPSAVLTALALAGLPTDRFQFVGFPPPKPGK
LGTFCAELAEVRATLVLFEGVSRLDRTLAALAKALGDREAAVCRELTKLHEEVRRGTLDTLAAHYAEAGPPKGEAVIVIA
PPDAAAPPSAGVLDDRLRQLLDAGESVRSAAERLAAESGVARRALYRRALELAGKADAEDRERPGER
>Mature_306_residues
SDTISDQQPTHAPPGRQLAPGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGGLLHRLGVSAKLTPYHEHNADA
ARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHEAGIRVTAVPGPSAVLTALALAGLPTDRFQFVGFPPPKPGKL
GTFCAELAEVRATLVLFEGVSRLDRTLAALAKALGDREAAVCRELTKLHEEVRRGTLDTLAAHYAEAGPPKGEAVIVIAP
PDAAAPPSAGVLDDRLRQLLDAGESVRSAAERLAAESGVARRALYRRALELAGKADAEDRERPGER

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=277, Percent_Identity=44.4043321299639, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31992; Mature: 31861

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTISDQQPTHAPPGRQLAPGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGG
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
LLHRLGVSAKLTPYHEHNADAARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
AGIRVTAVPGPSAVLTALALAGLPTDRFQFVGFPPPKPGKLGTFCAELAEVRATLVLFEG
CCCEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSRLDRTLAALAKALGDREAAVCRELTKLHEEVRRGTLDTLAAHYAEAGPPKGEAVIVIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEE
PPDAAAPPSAGVLDDRLRQLLDAGESVRSAAERLAAESGVARRALYRRALELAGKADAED
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RERPGER
CCCCCCC
>Mature Secondary Structure 
SDTISDQQPTHAPPGRQLAPGLHLVGTPIGNMGDISARAIDALAGADLVACEDTRVTGG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
LLHRLGVSAKLTPYHEHNADAARPALLAKLAEGAAIVLVSDAGMPLVSDPGYRLVRACHE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
AGIRVTAVPGPSAVLTALALAGLPTDRFQFVGFPPPKPGKLGTFCAELAEVRATLVLFEG
CCCEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSRLDRTLAALAKALGDREAAVCRELTKLHEEVRRGTLDTLAAHYAEAGPPKGEAVIVIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEE
PPDAAAPPSAGVLDDRLRQLLDAGESVRSAAERLAAESGVARRALYRRALELAGKADAED
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RERPGER
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]