| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83595016
Identifier: 83595016
GI number: 83595016
Start: 4234485
End: 4235117
Strand: Reverse
Name: 83595016
Synonym: Rru_A3687
Alternate gene names: NA
Gene position: 4235117-4234485 (Counterclockwise)
Preceding gene: 83595017
Following gene: 83595014
Centisome position: 97.3
GC content: 69.83
Gene sequence:
>633_bases ATGATCGCCGCCCTTTATGTTCCCGGGCGATCGATCCTTCATCGCCTGCCCGCCGGGGCGAAGCTGCTGGGGCTGGCGGT GCTCGGCACCGTGCTGTTTCCCGTGAACAATCCCTGGGCGCTGTGCGGGCTGGCCCTGGCGATCTTTCTGGTCTATCCGG CCTGCGGCCTGGGCTGGCGGCGGGCGGTCGGTCAACTGCGCGCCCTGGCTTTCTTCCTGGTGCTGATCGCCGCCAGCCAA TGGTGGCTGGCCGGCTGGGCCGAGGCGGTGGCGGTTTCGGCCCGGCTGGTCGCCCTGGTGCTGGCCGCCTCGCTGGTCAC CTATACCACCTCGCTTTCGGCGATGATGGCGGCGCTCGAAGGACCGCTCAAACCCTTCGCCCGCTTCGGCCTGCGTCCCG AGGTCGTGTCCTTCGCCCTAACCCTGGCCATCCGCTTCATCCCGGTGCTGATGGGGCTGGCCAAGGAGACCCGCGAGGCG ATGGCGGCGCGCGGCCGCGAAAGGGCGTGGTTCGCCCTGGCAGTGCCGATGATCATCCGCGCCCTGCGGTTGGCCGATCA GGTCACCGAGGCGGTGGAGGCGCGGGGGATGGACGTGGCGCTTGACCAAACGGCGCCCGGCAAAACGCCCTGA
Upstream 100 bases:
>100_bases ACCGGGTGCTGGTCATCGATGGCGGCCGGATCGTCCATGACGGCCCGCCGGCCCAGGCCCGCGCCTTCTATGAAACCCTG ATCAGCGCGCGGGACGGCGG
Downstream 100 bases:
>100_bases GGGCCGCCGTCCCAGGCGCGCCCATCCCCCCGCCCGGATCTTAGCCGGGTTACGCGCCCAGCACCGACGCCGCCGGGGTG TGCTCATAACCCAATTCGGC
Product: cobalt transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIAALYVPGRSILHRLPAGAKLLGLAVLGTVLFPVNNPWALCGLALAIFLVYPACGLGWRRAVGQLRALAFFLVLIAASQ WWLAGWAEAVAVSARLVALVLAASLVTYTTSLSAMMAALEGPLKPFARFGLRPEVVSFALTLAIRFIPVLMGLAKETREA MAARGRERAWFALAVPMIIRALRLADQVTEAVEARGMDVALDQTAPGKTP
Sequences:
>Translated_210_residues MIAALYVPGRSILHRLPAGAKLLGLAVLGTVLFPVNNPWALCGLALAIFLVYPACGLGWRRAVGQLRALAFFLVLIAASQ WWLAGWAEAVAVSARLVALVLAASLVTYTTSLSAMMAALEGPLKPFARFGLRPEVVSFALTLAIRFIPVLMGLAKETREA MAARGRERAWFALAVPMIIRALRLADQVTEAVEARGMDVALDQTAPGKTP >Mature_210_residues MIAALYVPGRSILHRLPAGAKLLGLAVLGTVLFPVNNPWALCGLALAIFLVYPACGLGWRRAVGQLRALAFFLVLIAASQ WWLAGWAEAVAVSARLVALVLAASLVTYTTSLSAMMAALEGPLKPFARFGLRPEVVSFALTLAIRFIPVLMGLAKETREA MAARGRERAWFALAVPMIIRALRLADQVTEAVEARGMDVALDQTAPGKTP
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22433; Mature: 22433
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAALYVPGRSILHRLPAGAKLLGLAVLGTVLFPVNNPWALCGLALAIFLVYPACGLGWR CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH RAVGQLRALAFFLVLIAASQWWLAGWAEAVAVSARLVALVLAASLVTYTTSLSAMMAALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPLKPFARFGLRPEVVSFALTLAIRFIPVLMGLAKETREAMAARGRERAWFALAVPMIIR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALRLADQVTEAVEARGMDVALDQTAPGKTP HHHHHHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure MIAALYVPGRSILHRLPAGAKLLGLAVLGTVLFPVNNPWALCGLALAIFLVYPACGLGWR CEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH RAVGQLRALAFFLVLIAASQWWLAGWAEAVAVSARLVALVLAASLVTYTTSLSAMMAALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPLKPFARFGLRPEVVSFALTLAIRFIPVLMGLAKETREAMAARGRERAWFALAVPMIIR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALRLADQVTEAVEARGMDVALDQTAPGKTP HHHHHHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA