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The map label for this gene is bkdR [H]

Identifier: 83595014

GI number: 83595014

Start: 4232693

End: 4233217

Strand: Reverse

Name: bkdR [H]

Synonym: Rru_A3685

Alternate gene names: 83595014

Gene position: 4233217-4232693 (Counterclockwise)

Preceding gene: 83595016

Following gene: 83595013

Centisome position: 97.25

GC content: 62.86

Gene sequence:

>525_bases
ATGCGCCTATGCACAACATTCAGGCGGAAATCGTCCGAATTTTCGTGGATCGTGCCAATGGTCGCCCTCGATACGCTAGA
TCGTAAGATTCTGCGGGCCTTACAATGCGACGGCCGCATCACCAACACCGAGCTTGCCGAGCGCATCGGCCTATCGGCTT
CGGCCTGCCTGCGGCGGGTGAAGCGGCTGGAAGACGAGGGGGTGATCGGCGGTTATACGGCGGTGCTCGATCAGATCGCC
CTTGGCAAACCGGCCTCGATTTTCGTTGAGATCACCCTGGCCAGCCAGTCGGAGGCCAGTTTATCGGCCTTCGAGGCGGC
GGTCCGAGTCTGCCCGGAGGTCATGGAATGCCACCTGATGTCGGGCAGCGCCGATTACCTGCTGCGCTTCGTCGCCGCCG
ACACCCTTGATTTCGAACGCATCCACAAGATCTATCTCACCCGCCTGCCCGGCGTCGCCCGCATCCGCTCGGCCTTCAGC
CTGCGCACCGTCTCGCGGCGCGCCGGCTTTCCCCTGGGGGATTAA

Upstream 100 bases:

>100_bases
TGCGACAATCCTTCAAGGCCCGCGCGGCGGGGGATGGTGACGAGAGATCAAAACTCTGCGCCGGATTCGGTGAAATGTGC
TTGCGAAACGACCAGGGCCT

Downstream 100 bases:

>100_bases
CCCATGCTATAGACGGGGGCGAAATTGGCGGAAAAAGGACCCATCCATGCAGGGCCATCACGCGGCGGCGCGCGCCTTGC
GCCGTCAGGGGCGCCTAGGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRLCTTFRRKSSEFSWIVPMVALDTLDRKILRALQCDGRITNTELAERIGLSASACLRRVKRLEDEGVIGGYTAVLDQIA
LGKPASIFVEITLASQSEASLSAFEAAVRVCPEVMECHLMSGSADYLLRFVAADTLDFERIHKIYLTRLPGVARIRSAFS
LRTVSRRAGFPLGD

Sequences:

>Translated_174_residues
MRLCTTFRRKSSEFSWIVPMVALDTLDRKILRALQCDGRITNTELAERIGLSASACLRRVKRLEDEGVIGGYTAVLDQIA
LGKPASIFVEITLASQSEASLSAFEAAVRVCPEVMECHLMSGSADYLLRFVAADTLDFERIHKIYLTRLPGVARIRSAFS
LRTVSRRAGFPLGD
>Mature_174_residues
MRLCTTFRRKSSEFSWIVPMVALDTLDRKILRALQCDGRITNTELAERIGLSASACLRRVKRLEDEGVIGGYTAVLDQIA
LGKPASIFVEITLASQSEASLSAFEAAVRVCPEVMECHLMSGSADYLLRFVAADTLDFERIHKIYLTRLPGVARIRSAFS
LRTVSRRAGFPLGD

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=43.2432432432432, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=32.6666666666667, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19284; Mature: 19284

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLCTTFRRKSSEFSWIVPMVALDTLDRKILRALQCDGRITNTELAERIGLSASACLRRV
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
KRLEDEGVIGGYTAVLDQIALGKPASIFVEITLASQSEASLSAFEAAVRVCPEVMECHLM
HHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
SGSADYLLRFVAADTLDFERIHKIYLTRLPGVARIRSAFSLRTVSRRAGFPLGD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLCTTFRRKSSEFSWIVPMVALDTLDRKILRALQCDGRITNTELAERIGLSASACLRRV
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
KRLEDEGVIGGYTAVLDQIALGKPASIFVEITLASQSEASLSAFEAAVRVCPEVMECHLM
HHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
SGSADYLLRFVAADTLDFERIHKIYLTRLPGVARIRSAFSLRTVSRRAGFPLGD
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]