Definition Rhodospirillum rubrum ATCC 11170 chromosome, complete genome.
Accession NC_007643
Length 4,352,825

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The map label for this gene is 83594959

Identifier: 83594959

GI number: 83594959

Start: 4170482

End: 4171045

Strand: Reverse

Name: 83594959

Synonym: Rru_A3630

Alternate gene names: NA

Gene position: 4171045-4170482 (Counterclockwise)

Preceding gene: 83594960

Following gene: 83594958

Centisome position: 95.82

GC content: 67.55

Gene sequence:

>564_bases
ATGTCGTGGTCTAGACGCCAGGCCCTTGTCCTTCTCGCCGGGGCCCTGGTCCCGGCGGGCTGCGGCTTCCGGCCGATGCT
GGCCGATCGCCCCGGCGCCGCCGGCCGTGGCGGGGCCTCGGGCGCCTTGGCCGGGATCTATGTCCATTCCGTGACCTATT
CCAAGGAAGAGGATGCGCGCTTCGGTCAGGAAATCCGCAATGCCCTGATCGATCGCCTTGGCCTTCCCGATCAACCGACC
TATGGGCTGACCCTGGTGGGCAGCTTGATCCGGCGCAGCTCGGGCATCACCAAGAGGGACCGGACCACCCGCTACACCAT
GAGCGCCTCGATCACCTTCCAGCTGCGCGCCCTTGATCGCGCCGGCGTGCAGCCGCCCAAGCCGCTGCTGTCGGGAACCG
AGACCTCATGGGCGGCCTATGACGTGATCGGCTCGCCCTTCGCCAACGAGATGAACGAGCGCGACGCGGTCAGCCGCACC
GCCGAACAGATCGCCGATCAGCTTTACACCCGCCTTGGCGCCTATTTCTCGCAAGCCCCGGCTCCGGCCGGCCGGGTTCT
TTAG

Upstream 100 bases:

>100_bases
GAAGATGCCGAGGCCGCCGCCCTGGCCCTGCCCACCGTTCTTGCCCAGCTTGCCGGGGCCGCGCCGCGCAAGGTTATCGT
CGTGCCCAACAGGATCATCA

Downstream 100 bases:

>100_bases
CCGCGCCCGTGAAACTGACCGGCCAAGCCATCGACGGCTTCCTGCGCAAGCCCGATCCGAAAATCCGCTGCGTGCTGGTT
TATGGCCCCGACGAGGGGCT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPT
YGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRT
AEQIADQLYTRLGAYFSQAPAPAGRVL

Sequences:

>Translated_187_residues
MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPT
YGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRT
AEQIADQLYTRLGAYFSQAPAPAGRVL
>Mature_186_residues
SWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDARFGQEIRNALIDRLGLPDQPTY
GLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDRAGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTA
EQIADQLYTRLGAYFSQAPAPAGRVL

Specific function: Unknown

COG id: COG5468

COG function: function code S; Predicted secreted (periplasmic) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20089; Mature: 19958

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDAR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH
FGQEIRNALIDRLGLPDQPTYGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHH
AGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTAEQIADQLYTRLGAYFSQAP
CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APAGRVL
CCCCCCC
>Mature Secondary Structure 
SWSRRQALVLLAGALVPAGCGFRPMLADRPGAAGRGGASGALAGIYVHSVTYSKEEDAR
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCHHHHH
FGQEIRNALIDRLGLPDQPTYGLTLVGSLIRRSSGITKRDRTTRYTMSASITFQLRALDR
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHH
AGVQPPKPLLSGTETSWAAYDVIGSPFANEMNERDAVSRTAEQIADQLYTRLGAYFSQAP
CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APAGRVL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA