Click here to switch to the map view.

The map label for this gene is yyaL [H]

Identifier: 83594951

GI number: 83594951

Start: 4160797

End: 4162839

Strand: Reverse

Name: yyaL [H]

Synonym: Rru_A3622

Alternate gene names: 83594951

Gene position: 4162839-4160797 (Counterclockwise)

Preceding gene: 83594958

Following gene: 83594950

Centisome position: 95.64

GC content: 68.87

Gene sequence:

>2043_bases
ATGAGCCGCAACCGCCTTGGCGAGGAAACCTCCCCTTATCTGCTGCAGCACAAGGACAACCCGGTTCACTGGCTGCCCTG
GGGCGAGGAGGCCTTCGCCGAAGCCCGGGCGCTCAATCGGCCGGTGCTGCTGAGCATTGGCTATTCGGCCTGCCACTGGT
GCCATGTCATGGCCCACGAAAGCTTCGAACACCCCCAGGTCGCCGAGGTGATGAACGCCCTGTTCGTTTCGGTCAAGGTC
GACCGCGAGGAGCACCCCGATGTCGATGCCCTCTATCAGGGGGCCCTGGCCTTGATGGGGGAACAGGGCGGTTGGCCGCT
GACCTTGTTCCTGACACCGGAGGGCGAACCGGTCACCGGCGGCACCTATTTCCCGCGCGAGCCGCGTTATGGCCGCCCGG
GCTTCGTCCAGGTGCTGCGCCAGGTTTCCGAGATCTTCCGCAGCGCCCCCGATAAGGTCGCCGAGACCGCGGCGCGCCTG
CGCGAGGCCCTGGCCGAGATGAACGCCGGCGATCGCGCGGGCGGCGTCGCTCTTAGCCTGCCCCAGCTCGATGACGCCGC
CCGCGCCTTGCTCAGTCATATCGACGGGGTGGCCGGCGGCCTGAGCGGGGCGCCGAAATTCCCCATGCCCTTCGTTTTCG
ATTTCCTGTGGCGGGCCTATCTGCGCACCGGCGACGCCAAGCTGAGGGCCGCCGTCACCCTGACCCTGGAGCGCATGGCC
CAGGGCGGCATCTACGATCATCTGGCCGGCGGCTTCGCCCGCTATTCCACCGACAGCCTGTGGCTGGCCCCGCATTTCGA
AAAGATGCTCTATGACAACGCCCAGCTCATCGCCCTGATGACCCTGGTGTGGAAGACCACCCGCAGCCCGCTGCTGGCCC
GGCGCATCGCCCAGACCGTGGCCTGGGCGCAGAGCGAGATGATCGGCGACAATGGCGCCTTCGCCGCCAGCCTGGACGCC
GATAGCGAGGGCGGCGAAGGTCGCTTCTATGTGTGGGACGAGGCCGAGATCGACGCCGCGCTGGGCGAACAGGCGGCGCT
GTTCAAGCAGGCCTATGACGTCACCCCCCAGGGCAATTGGGAGGGGCGGACGATTCTGAACCGCGCCACCCTCAGCCAGC
CGCCGACCCATGCCAGCGGCCTTTTGGACGAGGGCAAGGAAGACGCCATCGACGCCGCCTTGGCCCCCGCCCGCGCCCTA
TTGCTCGACCGGCGCGGCCAGCGGCCGCGCCCCGGCCGCGATGACAAGGTTCTGGCCGATTGGAATGGCCTGATGATCGC
CGCCCTGGCCGAAGCCGGCGAAGCCCTGTCCCGCCCCGAGTGGGTCGCCCTTGGCCGCAGCGCCTTTGACGCCGTCGTCG
CCACCATGAGCCGCGAGGACGGTCGCCTCGGCCATGCCTGGTGCGCCGGCCGGCTGGGCGAGACCGCCTTGCTTGAAGAC
TACGCCGGAATGATCCACGCCGCCCTCGCCCTCCATGGCATCAGCGGCGAAGCGGCCTTTTTAACGCAGGCGCAGGTCTG
GGCCGAAACCGTCGAGCGCCAGTACCGCGATCCGCGCGGCGGCTACTTCCAAAGCGCGGCCGATGCCTCGGCCCTGATCG
TGCGCACCCGCGGACTGATCGACAGCGCCCAGCCGTCGGGCAACGGCCTGCTCGCCCAGGGTCTGGCCCGGCTGTTCCTG
CTGACCGGCAAGGAGCTGTATCGCCAGAGGGCCGAGGATATCCTAGCCTCCTATGGCGCAAGTCTGTCCGAGCGCTTTCC
CCATACGGTGTCGGTGCTGGCGGCTTTTGAGCTGCTCGCCGCCGGGATTCAGGTGGTGCTGGTCAATGATGACGGCCGCC
TGGGCCGCGTCCTTGCCGAGGCGCCGAGCGCCACTTTGGTGGTTACCCGCCTGAGCGAGGGCACCCCCCTGCCCCGCGAC
CATCCGGCTTTCGGCAAGACGGCTTTGGGGGGGCGACCGACCGCCTATGTCTGCAGGGGCCCGGTGTGCGGTCGGCCGCT
GACCCAGCCCGACGACCTGCGCCAGGACCTTCTCGGCCGCTGA

Upstream 100 bases:

>100_bases
CTTTTCGCCGCCGCCCGCGCGGTGCTGGTCCTGACCGCCCTCCCCTTAGCCCGTACCCCTTTAAGCCCGCGCCCCCTCAA
GCCCGCGAAGGATCCGTCCG

Downstream 100 bases:

>100_bases
CCACCCCGCTTCGCCAAAGGAGGCGCCGCCATGCCCCGCATAACCCTTGCCAGCCCTGTGGGGCCCCTGTGGCTAGAGGA
GCGGCACGACGCCCTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MSRNRLGEETSPYLLQHKDNPVHWLPWGEEAFAEARALNRPVLLSIGYSACHWCHVMAHESFEHPQVAEVMNALFVSVKV
DREEHPDVDALYQGALALMGEQGGWPLTLFLTPEGEPVTGGTYFPREPRYGRPGFVQVLRQVSEIFRSAPDKVAETAARL
REALAEMNAGDRAGGVALSLPQLDDAARALLSHIDGVAGGLSGAPKFPMPFVFDFLWRAYLRTGDAKLRAAVTLTLERMA
QGGIYDHLAGGFARYSTDSLWLAPHFEKMLYDNAQLIALMTLVWKTTRSPLLARRIAQTVAWAQSEMIGDNGAFAASLDA
DSEGGEGRFYVWDEAEIDAALGEQAALFKQAYDVTPQGNWEGRTILNRATLSQPPTHASGLLDEGKEDAIDAALAPARAL
LLDRRGQRPRPGRDDKVLADWNGLMIAALAEAGEALSRPEWVALGRSAFDAVVATMSREDGRLGHAWCAGRLGETALLED
YAGMIHAALALHGISGEAAFLTQAQVWAETVERQYRDPRGGYFQSAADASALIVRTRGLIDSAQPSGNGLLAQGLARLFL
LTGKELYRQRAEDILASYGASLSERFPHTVSVLAAFELLAAGIQVVLVNDDGRLGRVLAEAPSATLVVTRLSEGTPLPRD
HPAFGKTALGGRPTAYVCRGPVCGRPLTQPDDLRQDLLGR

Sequences:

>Translated_680_residues
MSRNRLGEETSPYLLQHKDNPVHWLPWGEEAFAEARALNRPVLLSIGYSACHWCHVMAHESFEHPQVAEVMNALFVSVKV
DREEHPDVDALYQGALALMGEQGGWPLTLFLTPEGEPVTGGTYFPREPRYGRPGFVQVLRQVSEIFRSAPDKVAETAARL
REALAEMNAGDRAGGVALSLPQLDDAARALLSHIDGVAGGLSGAPKFPMPFVFDFLWRAYLRTGDAKLRAAVTLTLERMA
QGGIYDHLAGGFARYSTDSLWLAPHFEKMLYDNAQLIALMTLVWKTTRSPLLARRIAQTVAWAQSEMIGDNGAFAASLDA
DSEGGEGRFYVWDEAEIDAALGEQAALFKQAYDVTPQGNWEGRTILNRATLSQPPTHASGLLDEGKEDAIDAALAPARAL
LLDRRGQRPRPGRDDKVLADWNGLMIAALAEAGEALSRPEWVALGRSAFDAVVATMSREDGRLGHAWCAGRLGETALLED
YAGMIHAALALHGISGEAAFLTQAQVWAETVERQYRDPRGGYFQSAADASALIVRTRGLIDSAQPSGNGLLAQGLARLFL
LTGKELYRQRAEDILASYGASLSERFPHTVSVLAAFELLAAGIQVVLVNDDGRLGRVLAEAPSATLVVTRLSEGTPLPRD
HPAFGKTALGGRPTAYVCRGPVCGRPLTQPDDLRQDLLGR
>Mature_679_residues
SRNRLGEETSPYLLQHKDNPVHWLPWGEEAFAEARALNRPVLLSIGYSACHWCHVMAHESFEHPQVAEVMNALFVSVKVD
REEHPDVDALYQGALALMGEQGGWPLTLFLTPEGEPVTGGTYFPREPRYGRPGFVQVLRQVSEIFRSAPDKVAETAARLR
EALAEMNAGDRAGGVALSLPQLDDAARALLSHIDGVAGGLSGAPKFPMPFVFDFLWRAYLRTGDAKLRAAVTLTLERMAQ
GGIYDHLAGGFARYSTDSLWLAPHFEKMLYDNAQLIALMTLVWKTTRSPLLARRIAQTVAWAQSEMIGDNGAFAASLDAD
SEGGEGRFYVWDEAEIDAALGEQAALFKQAYDVTPQGNWEGRTILNRATLSQPPTHASGLLDEGKEDAIDAALAPARALL
LDRRGQRPRPGRDDKVLADWNGLMIAALAEAGEALSRPEWVALGRSAFDAVVATMSREDGRLGHAWCAGRLGETALLEDY
AGMIHAALALHGISGEAAFLTQAQVWAETVERQYRDPRGGYFQSAADASALIVRTRGLIDSAQPSGNGLLAQGLARLFLL
TGKELYRQRAEDILASYGASLSERFPHTVSVLAAFELLAAGIQVVLVNDDGRLGRVLAEAPSATLVVTRLSEGTPLPRDH
PAFGKTALGGRPTAYVCRGPVCGRPLTQPDDLRQDLLGR

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=744, Percent_Identity=34.2741935483871, Blast_Score=343, Evalue=3e-94,
Organism=Caenorhabditis elegans, GI25147430, Length=726, Percent_Identity=31.5426997245179, Blast_Score=345, Evalue=3e-95,
Organism=Drosophila melanogaster, GI20129985, Length=730, Percent_Identity=33.013698630137, Blast_Score=373, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 73784; Mature: 73653

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNRLGEETSPYLLQHKDNPVHWLPWGEEAFAEARALNRPVLLSIGYSACHWCHVMAHE
CCCCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC
SFEHPQVAEVMNALFVSVKVDREEHPDVDALYQGALALMGEQGGWPLTLFLTPEGEPVTG
CCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCC
GTYFPREPRYGRPGFVQVLRQVSEIFRSAPDKVAETAARLREALAEMNAGDRAGGVALSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PQLDDAARALLSHIDGVAGGLSGAPKFPMPFVFDFLWRAYLRTGDAKLRAAVTLTLERMA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QGGIYDHLAGGFARYSTDSLWLAPHFEKMLYDNAQLIALMTLVWKTTRSPLLARRIAQTV
CCCCHHHHCCCHHHCCCCCEEECHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
AWAQSEMIGDNGAFAASLDADSEGGEGRFYVWDEAEIDAALGEQAALFKQAYDVTPQGNW
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
EGRTILNRATLSQPPTHASGLLDEGKEDAIDAALAPARALLLDRRGQRPRPGRDDKVLAD
CCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
WNGLMIAALAEAGEALSRPEWVALGRSAFDAVVATMSREDGRLGHAWCAGRLGETALLED
CCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHH
YAGMIHAALALHGISGEAAFLTQAQVWAETVERQYRDPRGGYFQSAADASALIVRTRGLI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCC
DSAQPSGNGLLAQGLARLFLLTGKELYRQRAEDILASYGASLSERFPHTVSVLAAFELLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
AGIQVVLVNDDGRLGRVLAEAPSATLVVTRLSEGTPLPRDHPAFGKTALGGRPTAYVCRG
CCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PVCGRPLTQPDDLRQDLLGR
CCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SRNRLGEETSPYLLQHKDNPVHWLPWGEEAFAEARALNRPVLLSIGYSACHWCHVMAHE
CCCCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC
SFEHPQVAEVMNALFVSVKVDREEHPDVDALYQGALALMGEQGGWPLTLFLTPEGEPVTG
CCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCC
GTYFPREPRYGRPGFVQVLRQVSEIFRSAPDKVAETAARLREALAEMNAGDRAGGVALSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PQLDDAARALLSHIDGVAGGLSGAPKFPMPFVFDFLWRAYLRTGDAKLRAAVTLTLERMA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
QGGIYDHLAGGFARYSTDSLWLAPHFEKMLYDNAQLIALMTLVWKTTRSPLLARRIAQTV
CCCCHHHHCCCHHHCCCCCEEECHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
AWAQSEMIGDNGAFAASLDADSEGGEGRFYVWDEAEIDAALGEQAALFKQAYDVTPQGNW
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
EGRTILNRATLSQPPTHASGLLDEGKEDAIDAALAPARALLLDRRGQRPRPGRDDKVLAD
CCCCHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
WNGLMIAALAEAGEALSRPEWVALGRSAFDAVVATMSREDGRLGHAWCAGRLGETALLED
CCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHH
YAGMIHAALALHGISGEAAFLTQAQVWAETVERQYRDPRGGYFQSAADASALIVRTRGLI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCC
DSAQPSGNGLLAQGLARLFLLTGKELYRQRAEDILASYGASLSERFPHTVSVLAAFELLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
AGIQVVLVNDDGRLGRVLAEAPSATLVVTRLSEGTPLPRDHPAFGKTALGGRPTAYVCRG
CCEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PVCGRPLTQPDDLRQDLLGR
CCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]