| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594937
Identifier: 83594937
GI number: 83594937
Start: 4148332
End: 4148991
Strand: Reverse
Name: 83594937
Synonym: Rru_A3608
Alternate gene names: NA
Gene position: 4148991-4148332 (Counterclockwise)
Preceding gene: 83594940
Following gene: 83594936
Centisome position: 95.32
GC content: 60.15
Gene sequence:
>660_bases ATGAACGAAGGCTTTCAGTATATCGATATCATCTTTTTCGCTATGATCGCGGCTTTTCTCGTCTTGCGGTTGCGAAGCGT GCTGGGTCGTCGCACCGGAGAGGAGCAACGCCGCCCCGATCCCTTTGCCCAGCCCGAAAGCGCCCAAGACAACGTGATCG ACCTGTCGGGCCGCAAGGCCGTGGCCGGGCGACCGGGGGATGGCACGCTGGCCGGGGGATTGACCCAGATCCAGTTGACC GATCCGTCGTTTTCGCCCGAGGGCTTTCTGATCGGGGCCAAAGCGGCCTTCGAGATGATTCTGATGGCCTATGCCAAGGG TGACAAGGCGGTGCTCAAGCCCCTGCTCGCCGGCGAGGTCTTTCAGAATTTCAGCCGGGCGATCGACGAGCGCGAGCAGG CCGATGAAACCATGGAGACCGATCTGGTCGGTTTCAAAAGCGTCGAGATCCTGCGCGCCGGCATGGATGGCCAGGATGCC CTGGTCACCGTCAAATTCGTCACCGAACAGGTCAATTCCGTGCGCGACAAAAGCGACACGGTGGTCGACGGCAATCCCAA TCAGGTGGAAGAGGTCACTGATATCTGGACCTTCCGCCGCGATACCGTGTCGAACGATCCCAATTGGGACCTGATCGCCA CCCAAGTCCCCGAGGAATGA
Upstream 100 bases:
>100_bases TTCGACGATTGCCTAAGGCCAAAAAAACACGGATGGCCGGTGGTACGCGGCGGATAGTTGCGTTAGGGTGCCCCACGCCA AACCTCCAGACCGGGCCGCC
Downstream 100 bases:
>100_bases GTTCCCGGGCATGGGCGCGATGAACGGCACGTCCGGGCGGCGGCTGTCGACGGCAACCCGGGTCGCCGCGATGGCCGGGG TTCTGCTGCTGGCGGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Translocase Transmembrane Protein; Tim44-Like Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase; Tim44 Domain-Containing Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Transporter Protein; Tim44 Family Protein; Tim44-Like Domain Family; Membrane Translocase Subunit Tim; Import Inner Membrane Translocase; Import Inner Membrane Translocase Subunit; Membrane Associated Transporter Protein; Tim44-Like Domain Superfamily; Tim44-Like Domain Containing Protein; Translocase; Tim44-Like Domain Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNEGFQYIDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKAVAGRPGDGTLAGGLTQIQLT DPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLLAGEVFQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDA LVTVKFVTEQVNSVRDKSDTVVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPEE
Sequences:
>Translated_219_residues MNEGFQYIDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKAVAGRPGDGTLAGGLTQIQLT DPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLLAGEVFQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDA LVTVKFVTEQVNSVRDKSDTVVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPEE >Mature_219_residues MNEGFQYIDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKAVAGRPGDGTLAGGLTQIQLT DPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLLAGEVFQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDA LVTVKFVTEQVNSVRDKSDTVVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPEE
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24174; Mature: 24174
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEGFQYIDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEECCCCEE VAGRPGDGTLAGGLTQIQLTDPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLLAGEV ECCCCCCCCEECCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH FQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDALVTVKFVTEQVNSVRDKSDT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCE VVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPEE EECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC >Mature Secondary Structure MNEGFQYIDIIFFAMIAAFLVLRLRSVLGRRTGEEQRRPDPFAQPESAQDNVIDLSGRKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEECCCCEE VAGRPGDGTLAGGLTQIQLTDPSFSPEGFLIGAKAAFEMILMAYAKGDKAVLKPLLAGEV ECCCCCCCCEECCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH FQNFSRAIDEREQADETMETDLVGFKSVEILRAGMDGQDALVTVKFVTEQVNSVRDKSDT HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHCCCCE VVDGNPNQVEEVTDIWTFRRDTVSNDPNWDLIATQVPEE EECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA