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The map label for this gene is 83594917

Identifier: 83594917

GI number: 83594917

Start: 4131714

End: 4132463

Strand: Direct

Name: 83594917

Synonym: Rru_A3588

Alternate gene names: NA

Gene position: 4131714-4132463 (Clockwise)

Preceding gene: 83594912

Following gene: 83594918

Centisome position: 94.92

GC content: 65.87

Gene sequence:

>750_bases
ATGCACGACGATACCCTGGCCGTCGATCAAGCCGCTCCCATCGCCCCCGTTCCCCCCCCCAAGATCGCCGTCGAGCGGAC
CCGCACGGTCGCGGTCTGGGATCTGCCGACGCGGGTCTTCCACTGGGTTCTGGTGCTGCTGATGATCGTGCTCTACGCCA
GCGGCGAGGGCTGGCTGCCCATCTCCGTTCATATGCTGGCCGGCGAGGCGGTGCTTGCCCTGGTCATCTACCGGGTGCTG
TGGGGACTGGTCGGCAGCCCGACCTCGCGCTTCACCCATTTCGTGCGCGGGCCCAAGGGCGTGATCAGCTACCTCAAGGC
GATGGCCAAGGGAGCGCCGGAGCCCCTCGCCCATAACCCGGTCGGCGCCCTGATGGTCCTTGGCCTGTTGACCCTGCTCA
CTCTGTTGGCGGTGACCGGGCTGTTCTCCACCGACGACATCGCCACCGACGGGCCGCTGGCCTCGCTGGTGTCGAGTTCG
ACGATGAAGACCTTCACCTTCGTTCATAAGACGCTGTTCAACGTTATTCTCGCCCTGATCGCCCTCCATATCCTGGTCGC
CGTCGGCTCGCTGGTGTTCAAGCACGAGAACCGCATCCGTCCGATGGTGCTGGGCGTGCGCCGGGTGTCGATCGAGCGGG
CCGCCGAAGCCCCCAAGATCTATGGCCCGGTGGTTGCCAGCCTGTTCGCCCTGATCTTGTTGGCGGGCAGCGGCGCTTTC
GTGTGGTGGATCGTCCATCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
CGAGAAAGACCCTGTTTTCGTGTTTGTCTTCCGCCGTTGGTGGAAGATCGGGCAAGGGCGCGCGGCGCGCGATCCTTGCC
GCCCATCCGAGGAGACTATC

Downstream 100 bases:

>100_bases
TCGCCGGGTGCTTTTTTAAGTTGCTCTTTCCCCGCCGCGCCGCTTCTACTGGTTGTGATCGCGGTGGGGAGTAGAGTGGC
ATGGGGGCGCGGGTTCATAC

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MHDDTLAVDQAAPIAPVPPPKIAVERTRTVAVWDLPTRVFHWVLVLLMIVLYASGEGWLPISVHMLAGEAVLALVIYRVL
WGLVGSPTSRFTHFVRGPKGVISYLKAMAKGAPEPLAHNPVGALMVLGLLTLLTLLAVTGLFSTDDIATDGPLASLVSSS
TMKTFTFVHKTLFNVILALIALHILVAVGSLVFKHENRIRPMVLGVRRVSIERAAEAPKIYGPVVASLFALILLAGSGAF
VWWIVHLAG

Sequences:

>Translated_249_residues
MHDDTLAVDQAAPIAPVPPPKIAVERTRTVAVWDLPTRVFHWVLVLLMIVLYASGEGWLPISVHMLAGEAVLALVIYRVL
WGLVGSPTSRFTHFVRGPKGVISYLKAMAKGAPEPLAHNPVGALMVLGLLTLLTLLAVTGLFSTDDIATDGPLASLVSSS
TMKTFTFVHKTLFNVILALIALHILVAVGSLVFKHENRIRPMVLGVRRVSIERAAEAPKIYGPVVASLFALILLAGSGAF
VWWIVHLAG
>Mature_249_residues
MHDDTLAVDQAAPIAPVPPPKIAVERTRTVAVWDLPTRVFHWVLVLLMIVLYASGEGWLPISVHMLAGEAVLALVIYRVL
WGLVGSPTSRFTHFVRGPKGVISYLKAMAKGAPEPLAHNPVGALMVLGLLTLLTLLAVTGLFSTDDIATDGPLASLVSSS
TMKTFTFVHKTLFNVILALIALHILVAVGSLVFKHENRIRPMVLGVRRVSIERAAEAPKIYGPVVASLFALILLAGSGAF
VWWIVHLAG

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26770; Mature: 26770

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDDTLAVDQAAPIAPVPPPKIAVERTRTVAVWDLPTRVFHWVLVLLMIVLYASGEGWLP
CCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCE
ISVHMLAGEAVLALVIYRVLWGLVGSPTSRFTHFVRGPKGVISYLKAMAKGAPEPLAHNP
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
VGALMVLGLLTLLTLLAVTGLFSTDDIATDGPLASLVSSSTMKTFTFVHKTLFNVILALI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALHILVAVGSLVFKHENRIRPMVLGVRRVSIERAAEAPKIYGPVVASLFALILLAGSGAF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHH
VWWIVHLAG
HHHEEECCC
>Mature Secondary Structure
MHDDTLAVDQAAPIAPVPPPKIAVERTRTVAVWDLPTRVFHWVLVLLMIVLYASGEGWLP
CCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCE
ISVHMLAGEAVLALVIYRVLWGLVGSPTSRFTHFVRGPKGVISYLKAMAKGAPEPLAHNP
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
VGALMVLGLLTLLTLLAVTGLFSTDDIATDGPLASLVSSSTMKTFTFVHKTLFNVILALI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALHILVAVGSLVFKHENRIRPMVLGVRRVSIERAAEAPKIYGPVVASLFALILLAGSGAF
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHH
VWWIVHLAG
HHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA