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The map label for this gene is comM [H]

Identifier: 83594918

GI number: 83594918

Start: 4132544

End: 4134064

Strand: Direct

Name: comM [H]

Synonym: Rru_A3589

Alternate gene names: 83594918

Gene position: 4132544-4134064 (Clockwise)

Preceding gene: 83594917

Following gene: 83594919

Centisome position: 94.94

GC content: 71.66

Gene sequence:

>1521_bases
ATGGGGGCGCGGGTTCATACGGTGGCCTTCCAGGGAATCGACACCCTGGCGATCGAGGTTCAGGTGTCGATCACCGGCGG
CCTTCCCGCCTTCACCGTCGTTGGCCTGCCCGATAAGGCGGTGGGCGAAAGCCGCGAGCGAGTGCGCAGCGCCCTGGCCG
CCATCGGCCTGTCGCTGCCGCCCAATCGCATCACCGTCAACCTCGCCCCGGCCGATGTGCAAAAGGAAGGCAGCCACTTC
GATCTGCCGATCGCCCTGGGCCTGTTGCTCGGCATGGGGATCCTCGATCCCGGCGATCTCGATGGCTATCTGGTGCTGGG
TGAACTGGGGCTTGACGGATCGATCGCCGCCGTCGCCGGCGTTCTGCCCGCCGCCCTGGCCGCCCAGGCCAGCGATCGCG
GGCTGGTCTGCCCGGCCGCCCAGGGCGGCGAGGCGGCCTGGGCGGCTTCGGGCGACGTTCTGGCCCCGGCCGGGCTGCTT
GAACTGGTCAACCACCTGAAGGGCACCCAGATCCTGGGGCGGCCGCGGGCCGAGATCGCCAGCGACCCCACGGTTATCGC
CGATCTGTCCGAGGTCAAGGGCCAGGAAACCGCCCGGCGCGCCCTGGAGATCGCCGCCGCCGGCGCCCATAACCTGCTGC
TGGTCGGGCCGCCGGGATCGGGCAAATCGATGCTGGCCCAGCGCCTGCCCGGCTTATTGCCGCCGCTGACCCCGGCCGAG
GCGCTGGAGGTCAGCATGATCCACAGCGTCGCCGGCAAGCTGGAGAACGGCCGCCTGTTGCGCCGGCGGCCCTTTCGCGA
TCCCCACCACACCGCCTCGGCCGCCGCCATCGCCGGTGGCGGCCTGCGCGCCCGGCCCGGCGAGATCAGCCTTGCCCATA
ACGGCGTGCTGTTCCTTGATGAATTGCCCGAATTCCAGCGCGCCGCCCTGGAAGCCCTGCGCCAGCCCCTGGAAACCGGC
ACCATCGCCGTCAGCCGGGCCAATCTGCATGTCACCTATCCGGCGCGCTTCCAATTGGTGGCGGCGATGAACCCCTGCCG
CTGCGGCCATCTTGACGACCCGGCCCAGGCCTGTTCGCGGGCCCCGCGCTGCGCCGAGGAGTATCAGGCGCGGATTTCCG
GGCCGCTGTTCGACCGCATCGATCTGCATGTCGAGGTGCCGGCGGTCGCCCCCTTCGATCTGGCTCGCCTGCGCCCGGGC
GAAGCGACGGCCACGGTGGCCGCCCGCGTCGCCGAGGCCCGCGCCCTGCAGGCCGAACGCTATGCCGGAACGAAGATCAC
CACCAACCGCGAAGCCTCGGGCGCCCTGCTCGACCGCGTCGCCACTCCCGACGCCCCGGGGCAGGCCCTGCTGATCGAGG
CCACCGGCCGGCTGCGGCTCTCGGCGCGCGGCTATCACCGGGTGCTGCGGGTGGCGCGCACTATCGCCGATCTGGAAGGC
GCGGCCGCCATCACCCGCACCCATATCGCCGAGGCGCTGTCTTACCGCCGCCGGGGTCCCGGCCGCCAGAGCGCGGTGTA
A

Upstream 100 bases:

>100_bases
TCGTCCATCTGGCCGGCTGATCGCCGGGTGCTTTTTTAAGTTGCTCTTTCCCCGCCGCGCCGCTTCTACTGGTTGTGATC
GCGGTGGGGAGTAGAGTGGC

Downstream 100 bases:

>100_bases
GGGGAGGCGCGCGACGGCCCTCCCCATCGGCGCCCATCCGGGGTAGGCTGGGCGCCATGCTTGATCGTCGCCCCCTGGCC
CTTGCGGCCCTTGTTCTCCT

Product: Mg chelatase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MGARVHTVAFQGIDTLAIEVQVSITGGLPAFTVVGLPDKAVGESRERVRSALAAIGLSLPPNRITVNLAPADVQKEGSHF
DLPIALGLLLGMGILDPGDLDGYLVLGELGLDGSIAAVAGVLPAALAAQASDRGLVCPAAQGGEAAWAASGDVLAPAGLL
ELVNHLKGTQILGRPRAEIASDPTVIADLSEVKGQETARRALEIAAAGAHNLLLVGPPGSGKSMLAQRLPGLLPPLTPAE
ALEVSMIHSVAGKLENGRLLRRRPFRDPHHTASAAAIAGGGLRARPGEISLAHNGVLFLDELPEFQRAALEALRQPLETG
TIAVSRANLHVTYPARFQLVAAMNPCRCGHLDDPAQACSRAPRCAEEYQARISGPLFDRIDLHVEVPAVAPFDLARLRPG
EATATVAARVAEARALQAERYAGTKITTNREASGALLDRVATPDAPGQALLIEATGRLRLSARGYHRVLRVARTIADLEG
AAAITRTHIAEALSYRRRGPGRQSAV

Sequences:

>Translated_506_residues
MGARVHTVAFQGIDTLAIEVQVSITGGLPAFTVVGLPDKAVGESRERVRSALAAIGLSLPPNRITVNLAPADVQKEGSHF
DLPIALGLLLGMGILDPGDLDGYLVLGELGLDGSIAAVAGVLPAALAAQASDRGLVCPAAQGGEAAWAASGDVLAPAGLL
ELVNHLKGTQILGRPRAEIASDPTVIADLSEVKGQETARRALEIAAAGAHNLLLVGPPGSGKSMLAQRLPGLLPPLTPAE
ALEVSMIHSVAGKLENGRLLRRRPFRDPHHTASAAAIAGGGLRARPGEISLAHNGVLFLDELPEFQRAALEALRQPLETG
TIAVSRANLHVTYPARFQLVAAMNPCRCGHLDDPAQACSRAPRCAEEYQARISGPLFDRIDLHVEVPAVAPFDLARLRPG
EATATVAARVAEARALQAERYAGTKITTNREASGALLDRVATPDAPGQALLIEATGRLRLSARGYHRVLRVARTIADLEG
AAAITRTHIAEALSYRRRGPGRQSAV
>Mature_505_residues
GARVHTVAFQGIDTLAIEVQVSITGGLPAFTVVGLPDKAVGESRERVRSALAAIGLSLPPNRITVNLAPADVQKEGSHFD
LPIALGLLLGMGILDPGDLDGYLVLGELGLDGSIAAVAGVLPAALAAQASDRGLVCPAAQGGEAAWAASGDVLAPAGLLE
LVNHLKGTQILGRPRAEIASDPTVIADLSEVKGQETARRALEIAAAGAHNLLLVGPPGSGKSMLAQRLPGLLPPLTPAEA
LEVSMIHSVAGKLENGRLLRRRPFRDPHHTASAAAIAGGGLRARPGEISLAHNGVLFLDELPEFQRAALEALRQPLETGT
IAVSRANLHVTYPARFQLVAAMNPCRCGHLDDPAQACSRAPRCAEEYQARISGPLFDRIDLHVEVPAVAPFDLARLRPGE
ATATVAARVAEARALQAERYAGTKITTNREASGALLDRVATPDAPGQALLIEATGRLRLSARGYHRVLRVARTIADLEGA
AAITRTHIAEALSYRRRGPGRQSAV

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=498, Percent_Identity=45.3815261044177, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 52793; Mature: 52662

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARVHTVAFQGIDTLAIEVQVSITGGLPAFTVVGLPDKAVGESRERVRSALAAIGLSLP
CCCEEEEEEECCCEEEEEEEEEEEECCCCEEEEEECCCHHHCHHHHHHHHHHHHHCCCCC
PNRITVNLAPADVQKEGSHFDLPIALGLLLGMGILDPGDLDGYLVLGELGLDGSIAAVAG
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH
VLPAALAAQASDRGLVCPAAQGGEAAWAASGDVLAPAGLLELVNHLKGTQILGRPRAEIA
HHHHHHHHCCCCCCEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEECCCCCHHHC
SDPTVIADLSEVKGQETARRALEIAAAGAHNLLLVGPPGSGKSMLAQRLPGLLPPLTPAE
CCCCEEEEHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCHH
ALEVSMIHSVAGKLENGRLLRRRPFRDPHHTASAAAIAGGGLRARPGEISLAHNGVLFLD
HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHEECCCCCCCCCCEEEECCCEEEEC
ELPEFQRAALEALRQPLETGTIAVSRANLHVTYPARFQLVAAMNPCRCGHLDDPAQACSR
CCCHHHHHHHHHHHCCHHCCCEEEEECEEEEECCHHEEEEEECCCCCCCCCCCHHHHHHC
APRCAEEYQARISGPLFDRIDLHVEVPAVAPFDLARLRPGEATATVAARVAEARALQAER
CCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YAGTKITTNREASGALLDRVATPDAPGQALLIEATGRLRLSARGYHRVLRVARTIADLEG
HCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCC
AAAITRTHIAEALSYRRRGPGRQSAV
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GARVHTVAFQGIDTLAIEVQVSITGGLPAFTVVGLPDKAVGESRERVRSALAAIGLSLP
CCEEEEEEECCCEEEEEEEEEEEECCCCEEEEEECCCHHHCHHHHHHHHHHHHHCCCCC
PNRITVNLAPADVQKEGSHFDLPIALGLLLGMGILDPGDLDGYLVLGELGLDGSIAAVAG
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH
VLPAALAAQASDRGLVCPAAQGGEAAWAASGDVLAPAGLLELVNHLKGTQILGRPRAEIA
HHHHHHHHCCCCCCEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEECCCCCHHHC
SDPTVIADLSEVKGQETARRALEIAAAGAHNLLLVGPPGSGKSMLAQRLPGLLPPLTPAE
CCCCEEEEHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCHH
ALEVSMIHSVAGKLENGRLLRRRPFRDPHHTASAAAIAGGGLRARPGEISLAHNGVLFLD
HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHEECCCCCCCCCCEEEECCCEEEEC
ELPEFQRAALEALRQPLETGTIAVSRANLHVTYPARFQLVAAMNPCRCGHLDDPAQACSR
CCCHHHHHHHHHHHCCHHCCCEEEEECEEEEECCHHEEEEEECCCCCCCCCCCHHHHHHC
APRCAEEYQARISGPLFDRIDLHVEVPAVAPFDLARLRPGEATATVAARVAEARALQAER
CCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YAGTKITTNREASGALLDRVATPDAPGQALLIEATGRLRLSARGYHRVLRVARTIADLEG
HCCCEEECCCCCCHHHHHHHCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCC
AAAITRTHIAEALSYRRRGPGRQSAV
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]