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The map label for this gene is ydbC [H]

Identifier: 83594880

GI number: 83594880

Start: 4091243

End: 4092145

Strand: Direct

Name: ydbC [H]

Synonym: Rru_A3551

Alternate gene names: 83594880

Gene position: 4091243-4092145 (Clockwise)

Preceding gene: 83594879

Following gene: 83594885

Centisome position: 93.99

GC content: 66.0

Gene sequence:

>903_bases
ATGATATTTCCCAACGCGAGCCAGTCGGGCTCCTTCCTGATCGGCGGCGACCTGCCGGTCAATCGCCTTGGCTTCGGCGC
GATGCGGGTCACCGGCCCCGGCGTCTGGGGCGCCGGCCCCCAGCCGGTCGAAGCCCTGAAGACCTTGAAGATGCTGCCCG
AGGTGGGCGTCACCTTGATCGACACCGCCGATTCCTATGGCCCGGGCATTTCCGAGGCGATGATCGCCGAGGCGCTGTAC
CCCTATGAGGGCGCCAATGCCGACCTCGTCATCGCCACCAAGGGCGGGCTGGTGCGCCCGGCTCCCGATGTCTGGATCCC
GCTTGGCCGCCCCGAATACCTGCGCCAGCAGGCCCAGGTCAGCCGGCGCACCCTGAAGGTCGAAAAGATCGGCCTGTGGC
AGTTGCACCGTATCGATCCCAAGGTGCCGCGCGATGAGCAGTTCGACGCCATCAAATCCCTGATCGACGACGGCATCATC
GCCCATGCCGGATTGAGCGAAGTCACCATCGCCGACATCGAAGAGGCTTCGGATTACTTCCCGGTGGCCACCGTGCAGAA
CCGCTACAACATGCTTGATCGCGCCAGCGAGCCGGTTCTGGAGTATTGCGAGGCCAAGGGCATCGGCTTCATTCCGTGGT
CGCCGCTGGGGGCGGGCGGGCTGTTCGACGCCGGATCGGAGCTGGCCGTGCTGGCCAAGCGCTGGAGCATCACCCCCGGC
CAGATCGCGCTCGCCTGGTTGCTCAAGCGCAGCCCGGTAATCCTGCCGATCCCCGGCACCTCGAAGCGCGCCCATCTGCA
AGAAAACATCGCCGCCGCCGCCATCGTGCTCACCGACGACGATTTCTCCGCCTTCGACCAACTGGCCCGCGATTACGCCC
GCAAGATCGCCCAGACCGCCTGA

Upstream 100 bases:

>100_bases
GACCTTGATCGCCTGTGGGAGCTGGCCCGCCGATGAACCACGCACAGGTTTCTCCCCCCTCTCTTCGACGTGCCCCGTCT
CAGCAAAGGATCCCTGCGCA

Downstream 100 bases:

>100_bases
TCAACGCCAATCGTGTTAAAGGGGGCCCGCTTGCACGCCCCCTTTAACGCAAAGGTTTGATCCAGGCCAGGGGCAGCAGA
GGAACGACGACCCGCGTGTT

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIFPNASQSGSFLIGGDLPVNRLGFGAMRVTGPGVWGAGPQPVEALKTLKMLPEVGVTLIDTADSYGPGISEAMIAEALY
PYEGANADLVIATKGGLVRPAPDVWIPLGRPEYLRQQAQVSRRTLKVEKIGLWQLHRIDPKVPRDEQFDAIKSLIDDGII
AHAGLSEVTIADIEEASDYFPVATVQNRYNMLDRASEPVLEYCEAKGIGFIPWSPLGAGGLFDAGSELAVLAKRWSITPG
QIALAWLLKRSPVILPIPGTSKRAHLQENIAAAAIVLTDDDFSAFDQLARDYARKIAQTA

Sequences:

>Translated_300_residues
MIFPNASQSGSFLIGGDLPVNRLGFGAMRVTGPGVWGAGPQPVEALKTLKMLPEVGVTLIDTADSYGPGISEAMIAEALY
PYEGANADLVIATKGGLVRPAPDVWIPLGRPEYLRQQAQVSRRTLKVEKIGLWQLHRIDPKVPRDEQFDAIKSLIDDGII
AHAGLSEVTIADIEEASDYFPVATVQNRYNMLDRASEPVLEYCEAKGIGFIPWSPLGAGGLFDAGSELAVLAKRWSITPG
QIALAWLLKRSPVILPIPGTSKRAHLQENIAAAAIVLTDDDFSAFDQLARDYARKIAQTA
>Mature_300_residues
MIFPNASQSGSFLIGGDLPVNRLGFGAMRVTGPGVWGAGPQPVEALKTLKMLPEVGVTLIDTADSYGPGISEAMIAEALY
PYEGANADLVIATKGGLVRPAPDVWIPLGRPEYLRQQAQVSRRTLKVEKIGLWQLHRIDPKVPRDEQFDAIKSLIDDGII
AHAGLSEVTIADIEEASDYFPVATVQNRYNMLDRASEPVLEYCEAKGIGFIPWSPLGAGGLFDAGSELAVLAKRWSITPG
QIALAWLLKRSPVILPIPGTSKRAHLQENIAAAAIVLTDDDFSAFDQLARDYARKIAQTA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=289, Percent_Identity=36.6782006920415, Blast_Score=171, Evalue=5e-44,
Organism=Escherichia coli, GI87081735, Length=307, Percent_Identity=28.0130293159609, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788070, Length=321, Percent_Identity=26.791277258567, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788081, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI48994888, Length=240, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6325169, Length=296, Percent_Identity=24.3243243243243, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32355; Mature: 32355

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPNASQSGSFLIGGDLPVNRLGFGAMRVTGPGVWGAGPQPVEALKTLKMLPEVGVTLI
CCCCCCCCCCCEEEECCCCHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEE
DTADSYGPGISEAMIAEALYPYEGANADLVIATKGGLVRPAPDVWIPLGRPEYLRQQAQV
ECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHH
SRRTLKVEKIGLWQLHRIDPKVPRDEQFDAIKSLIDDGIIAHAGLSEVTIADIEEASDYF
HHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHCCCCC
PVATVQNRYNMLDRASEPVLEYCEAKGIGFIPWSPLGAGGLFDAGSELAVLAKRWSITPG
CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCH
QIALAWLLKRSPVILPIPGTSKRAHLQENIAAAAIVLTDDDFSAFDQLARDYARKIAQTA
HHHHHHHHHCCCEEEECCCCCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFPNASQSGSFLIGGDLPVNRLGFGAMRVTGPGVWGAGPQPVEALKTLKMLPEVGVTLI
CCCCCCCCCCCEEEECCCCHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEE
DTADSYGPGISEAMIAEALYPYEGANADLVIATKGGLVRPAPDVWIPLGRPEYLRQQAQV
ECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHH
SRRTLKVEKIGLWQLHRIDPKVPRDEQFDAIKSLIDDGIIAHAGLSEVTIADIEEASDYF
HHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHCCCCC
PVATVQNRYNMLDRASEPVLEYCEAKGIGFIPWSPLGAGGLFDAGSELAVLAKRWSITPG
CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCH
QIALAWLLKRSPVILPIPGTSKRAHLQENIAAAAIVLTDDDFSAFDQLARDYARKIAQTA
HHHHHHHHHCCCEEEECCCCCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]