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The map label for this gene is yggU [C]

Identifier: 83594855

GI number: 83594855

Start: 4058466

End: 4058807

Strand: Reverse

Name: yggU [C]

Synonym: Rru_A3526

Alternate gene names: 83594855

Gene position: 4058807-4058466 (Counterclockwise)

Preceding gene: 83594856

Following gene: 83594854

Centisome position: 93.25

GC content: 72.51

Gene sequence:

>342_bases
GTGTCCGAGGCCCTGGCCCAGGGACCGCTGACGCCCTGCGCCGGCGGTCTGCGCCTCGCCCTGCGTCTGACCCCCAAGGC
CGGGCGCGACGGGGTGAGCGGCGTGGTCGCCGAGGCCGACGGGTCGCTGGTGGTCAAGGCCTCGGTCACCGCCGTACCCG
AGGACGGCAAGGCCAATGCCGCCCTTCTCAAGCTGCTCTCCCGCCAATGGAAGCTGCCCAGAAGCAGCCTCGCCGTGGTT
CACGGCCAGACCGACCGCCGCAAGGTGATCGAGATCAGCGGCGAGCCCGCCCTGCTCACCCCCAGGCTGGTCGCCTGGGT
CGATAGCCTGCCCCGGCTGTAG

Upstream 100 bases:

>100_bases
GGGGGCATCGACCTGTCGCCGATCGTGCTGATCCTTCTTCTTTATTTCATTCAGAGCGTCATCGCCGGCCTCGCCATCCG
TATGCTCTAGGACCCGACCC

Downstream 100 bases:

>100_bases
GCCCGGCATGGGCGGCGGTCGCGGCGGCTTCGCCACTGTGCCGCTCGCCCTGCTGATGGTCACCCTGGCCGGCGTTATCG
TGCTGGCCCGTCTGGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSEALAQGPLTPCAGGLRLALRLTPKAGRDGVSGVVAEADGSLVVKASVTAVPEDGKANAALLKLLSRQWKLPRSSLAVV
HGQTDRRKVIEISGEPALLTPRLVAWVDSLPRL

Sequences:

>Translated_113_residues
MSEALAQGPLTPCAGGLRLALRLTPKAGRDGVSGVVAEADGSLVVKASVTAVPEDGKANAALLKLLSRQWKLPRSSLAVV
HGQTDRRKVIEISGEPALLTPRLVAWVDSLPRL
>Mature_112_residues
SEALAQGPLTPCAGGLRLALRLTPKAGRDGVSGVVAEADGSLVVKASVTAVPEDGKANAALLKLLSRQWKLPRSSLAVVH
GQTDRRKVIEISGEPALLTPRLVAWVDSLPRL

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11812; Mature: 11681

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEALAQGPLTPCAGGLRLALRLTPKAGRDGVSGVVAEADGSLVVKASVTAVPEDGKANA
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCH
ALLKLLSRQWKLPRSSLAVVHGQTDRRKVIEISGEPALLTPRLVAWVDSLPRL
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCEECHHHHHHHHHCCCC
>Mature Secondary Structure 
SEALAQGPLTPCAGGLRLALRLTPKAGRDGVSGVVAEADGSLVVKASVTAVPEDGKANA
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCH
ALLKLLSRQWKLPRSSLAVVHGQTDRRKVIEISGEPALLTPRLVAWVDSLPRL
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA