| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594854
Identifier: 83594854
GI number: 83594854
Start: 4057820
End: 4058458
Strand: Reverse
Name: 83594854
Synonym: Rru_A3525
Alternate gene names: NA
Gene position: 4058458-4057820 (Counterclockwise)
Preceding gene: 83594855
Following gene: 83594849
Centisome position: 93.24
GC content: 74.49
Gene sequence:
>639_bases ATGGGCGGCGGTCGCGGCGGCTTCGCCACTGTGCCGCTCGCCCTGCTGATGGTCACCCTGGCCGGCGTTATCGTGCTGGC CCGTCTGGCGCCGGGGTCCCCCGATGATCTGCGTCAGGCCAAGCTGACCCACGCCAAGATGGCGGCGCTGGAGCGCGCCC TTGTCACCTTCGCCGCCCTTCAGGGCCGCCTGCCCTGCCCCGCCGCCCTCGCCCAGGGCGACGAGGCGCCTTGCGCAGAC GCCGTCGTCAGCCTGGGCGGCGTGCCGACGGCAAGTCTCGGCCTCGATCCCACGGCCGGCCGCGACGCCTGGGGGCGGTT GTTCACCTATGGGGTTACCACGGCCCTGGCCCGCCCCGGCGGCTGGACCGGCGGCGCGGCCGGCGCGGTGATCGTTCGGC CACGCCCGGGCATCACCAAGCCCAAGGCCTGGGTGCTGGTCAGCCACGGCGAGAATGGGCGCGGCGCGCGGCGGGCCAAC GCCACGCTGGTCGATGATCCGGCCGGTCCGCGCGAAAGGGATAACCTGGGACGTCCCCCCGATGGCGATATGCCGGGCTT TGCCGCCGGTCCCCATGATGGGGCCGAGCCGGGCGGGGAGGGCTATGACGACCTGCTGCGCGCCGGCGATCCGCCCTGA
Upstream 100 bases:
>100_bases ACCGACCGCCGCAAGGTGATCGAGATCAGCGGCGAGCCCGCCCTGCTCACCCCCAGGCTGGTCGCCTGGGTCGATAGCCT GCCCCGGCTGTAGGCCCGGC
Downstream 100 bases:
>100_bases AAAGGCCGCTTCGGGATTTGCTCCCCTGTGAAAATCCAAGAGGGGTGTGAGCGACATAGGTCACCCACACCCCTCTAAGG GCCTCTCCGATCCGGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGGGRGGFATVPLALLMVTLAGVIVLARLAPGSPDDLRQAKLTHAKMAALERALVTFAALQGRLPCPAALAQGDEAPCAD AVVSLGGVPTASLGLDPTAGRDAWGRLFTYGVTTALARPGGWTGGAAGAVIVRPRPGITKPKAWVLVSHGENGRGARRAN ATLVDDPAGPRERDNLGRPPDGDMPGFAAGPHDGAEPGGEGYDDLLRAGDPP
Sequences:
>Translated_212_residues MGGGRGGFATVPLALLMVTLAGVIVLARLAPGSPDDLRQAKLTHAKMAALERALVTFAALQGRLPCPAALAQGDEAPCAD AVVSLGGVPTASLGLDPTAGRDAWGRLFTYGVTTALARPGGWTGGAAGAVIVRPRPGITKPKAWVLVSHGENGRGARRAN ATLVDDPAGPRERDNLGRPPDGDMPGFAAGPHDGAEPGGEGYDDLLRAGDPP >Mature_211_residues GGGRGGFATVPLALLMVTLAGVIVLARLAPGSPDDLRQAKLTHAKMAALERALVTFAALQGRLPCPAALAQGDEAPCADA VVSLGGVPTASLGLDPTAGRDAWGRLFTYGVTTALARPGGWTGGAAGAVIVRPRPGITKPKAWVLVSHGENGRGARRANA TLVDDPAGPRERDNLGRPPDGDMPGFAAGPHDGAEPGGEGYDDLLRAGDPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21389; Mature: 21257
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGRGGFATVPLALLMVTLAGVIVLARLAPGSPDDLRQAKLTHAKMAALERALVTFAAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLPCPAALAQGDEAPCADAVVSLGGVPTASLGLDPTAGRDAWGRLFTYGVTTALARPG HCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC GWTGGAAGAVIVRPRPGITKPKAWVLVSHGENGRGARRANATLVDDPAGPRERDNLGRPP CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DGDMPGFAAGPHDGAEPGGEGYDDLLRAGDPP CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure GGGRGGFATVPLALLMVTLAGVIVLARLAPGSPDDLRQAKLTHAKMAALERALVTFAAL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLPCPAALAQGDEAPCADAVVSLGGVPTASLGLDPTAGRDAWGRLFTYGVTTALARPG HCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC GWTGGAAGAVIVRPRPGITKPKAWVLVSHGENGRGARRANATLVDDPAGPRERDNLGRPP CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC DGDMPGFAAGPHDGAEPGGEGYDDLLRAGDPP CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA