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The map label for this gene is paaK [H]

Identifier: 83594833

GI number: 83594833

Start: 4031019

End: 4032260

Strand: Reverse

Name: paaK [H]

Synonym: Rru_A3504

Alternate gene names: 83594833

Gene position: 4032260-4031019 (Counterclockwise)

Preceding gene: 83594834

Following gene: 83594830

Centisome position: 92.64

GC content: 67.55

Gene sequence:

>1242_bases
ATGGTTCGCTTCTTCGACGCCCTGGAAACCCGTGAGCCCGAGGTCAGGGACCGCGAGCAGGCGGCCGCCCTTCCCGGGCT
GATCCAACATGCCAAGGACCATGCCCCGGCCTATGCCCGGCTGCTGGCCGATATCGATCCGCCCGCCATCACCAGCCGCG
AGGCCCTGGCCGCCTTGCCGGTGACCCGCAAATCGGCGCTGATCAGCCTTCAGGCCGAAGCCCCGCCCTTCGGCGGCTTC
GCCACCAGCCGCGGCGCCTTCAGCCGGGTGCTGCAATCCCCCGGCCCGATCTATGAGCCCGAGGGCAAGCGCAGCGATTA
CTGGCGGCTGTCGCGCGCCCTGTTCGCCGCCGGCTTCCGTCCGGGCGATCTGGTTCATAACTGCTTCGCCTATCACTTCA
CCCCCGGCGGCTGGATCTTCGACGATGGTGCCCAGGCCCTGGGGTGCCCGGTGTTTCCCGCCGGCACCGGCCAGACCGAA
CAGCAGCTGCAGGCGATCGCCGCCCTGCGGCCGACCGCTTATGTCGGCACGCCGTCGTTCCTGGCGATCCTGCTCGACAA
GGCCGATTACCTTGGCGCCGATATTTCGTCGCTGAAAAAGGGCCTGGTCTCGGCCGAAGCCTATCTGCCGCCCCAGCGCA
CCCTGTTCGCCGAGCGCGGCATTCCCACCTATCAGTGCTATTCGACCGCCGATCTGGGGCTGATCGCCTATGAATCCCCC
GACGACTCGGGGGCGGTGGAAGGCATGGTGGTGGATGAGGGGGTGATATTGGAAATCGTCCGCCCGGGGACCGGCGATCT
TGTGGCGCCGGGCGAGGTGGGCGAGGTGCTGGTCACCACCTTCACCCCCGAATATCCGCTGATCCGCTTCGCCACCGGCG
ATCTTTCGGCCACCCTGCCCGGCCCCAGCCCCTGCGGACGGACCAACATGCGGATCAAGGGGTGGATGGGGCGGGCCGAT
CAGACCACCAAGGTCAAGGGCATGTTCGTCCATCCCCAGCAGGTGGCCGACGTGGTCCGCCGCCATGACGCCTTGGCCAA
GGCCCGGCTGATCGTGACGCGGATCGAGGGCGGCGACGTCATGACCCTGGTCTGCGAAACCACCGAGACCCTGGATCTGG
CCGATCAGGTGGCCGAAAGCCTGCGGGTGGTGACCAAATTGCGCGGCGAGGTGCGGTTCGTCACCCCGGGATCCCTGCCC
AACGACGGCAAAGTGATCGAAGACGCCCGCGACTACGGCTGA

Upstream 100 bases:

>100_bases
CACCGCAAGTCTTTCAAGAACCTGAAATCCTACAAACGCCGCAAGCGTTGGTTATAATGGTGTTTCCCTATCGCCTTCCC
TCTCGCCAAAAGGAGTGGCC

Downstream 100 bases:

>100_bases
GGGCCCCCTCAGCCGGCTTCCTCGCCGAAACGCAACAGGCAGCCGTCGGGATCTTGAACGTGGAACTCGCGCATGCCCCA
GGGATGGGTTTCCAGGCTGC

Product: putative phenylacetate-CoA ligase

Products: NA

Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVRFFDALETREPEVRDREQAAALPGLIQHAKDHAPAYARLLADIDPPAITSREALAALPVTRKSALISLQAEAPPFGGF
ATSRGAFSRVLQSPGPIYEPEGKRSDYWRLSRALFAAGFRPGDLVHNCFAYHFTPGGWIFDDGAQALGCPVFPAGTGQTE
QQLQAIAALRPTAYVGTPSFLAILLDKADYLGADISSLKKGLVSAEAYLPPQRTLFAERGIPTYQCYSTADLGLIAYESP
DDSGAVEGMVVDEGVILEIVRPGTGDLVAPGEVGEVLVTTFTPEYPLIRFATGDLSATLPGPSPCGRTNMRIKGWMGRAD
QTTKVKGMFVHPQQVADVVRRHDALAKARLIVTRIEGGDVMTLVCETTETLDLADQVAESLRVVTKLRGEVRFVTPGSLP
NDGKVIEDARDYG

Sequences:

>Translated_413_residues
MVRFFDALETREPEVRDREQAAALPGLIQHAKDHAPAYARLLADIDPPAITSREALAALPVTRKSALISLQAEAPPFGGF
ATSRGAFSRVLQSPGPIYEPEGKRSDYWRLSRALFAAGFRPGDLVHNCFAYHFTPGGWIFDDGAQALGCPVFPAGTGQTE
QQLQAIAALRPTAYVGTPSFLAILLDKADYLGADISSLKKGLVSAEAYLPPQRTLFAERGIPTYQCYSTADLGLIAYESP
DDSGAVEGMVVDEGVILEIVRPGTGDLVAPGEVGEVLVTTFTPEYPLIRFATGDLSATLPGPSPCGRTNMRIKGWMGRAD
QTTKVKGMFVHPQQVADVVRRHDALAKARLIVTRIEGGDVMTLVCETTETLDLADQVAESLRVVTKLRGEVRFVTPGSLP
NDGKVIEDARDYG
>Mature_413_residues
MVRFFDALETREPEVRDREQAAALPGLIQHAKDHAPAYARLLADIDPPAITSREALAALPVTRKSALISLQAEAPPFGGF
ATSRGAFSRVLQSPGPIYEPEGKRSDYWRLSRALFAAGFRPGDLVHNCFAYHFTPGGWIFDDGAQALGCPVFPAGTGQTE
QQLQAIAALRPTAYVGTPSFLAILLDKADYLGADISSLKKGLVSAEAYLPPQRTLFAERGIPTYQCYSTADLGLIAYESP
DDSGAVEGMVVDEGVILEIVRPGTGDLVAPGEVGEVLVTTFTPEYPLIRFATGDLSATLPGPSPCGRTNMRIKGWMGRAD
QTTKVKGMFVHPQQVADVVRRHDALAKARLIVTRIEGGDVMTLVCETTETLDLADQVAESLRVVTKLRGEVRFVTPGSLP
NDGKVIEDARDYG

Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787664, Length=430, Percent_Identity=28.1395348837209, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000873
- InterPro:   IPR011880 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.30 [H]

Molecular weight: Translated: 44484; Mature: 44484

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFFDALETREPEVRDREQAAALPGLIQHAKDHAPAYARLLADIDPPAITSREALAALP
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHCC
VTRKSALISLQAEAPPFGGFATSRGAFSRVLQSPGPIYEPEGKRSDYWRLSRALFAAGFR
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PGDLVHNCFAYHFTPGGWIFDDGAQALGCPVFPAGTGQTEQQLQAIAALRPTAYVGTPSF
CHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHH
LAILLDKADYLGADISSLKKGLVSAEAYLPPQRTLFAERGIPTYQCYSTADLGLIAYESP
HHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCEEEEECCC
DDSGAVEGMVVDEGVILEIVRPGTGDLVAPGEVGEVLVTTFTPEYPLIRFATGDLSATLP
CCCCCCCEEEECCCEEEEEECCCCCCEECCCCCCCEEEEEECCCCCEEEEECCCCEEECC
GPSPCGRTNMRIKGWMGRADQTTKVKGMFVHPQQVADVVRRHDALAKARLIVTRIEGGDV
CCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEECCCCE
MTLVCETTETLDLADQVAESLRVVTKLRGEVRFVTPGSLPNDGKVIEDARDYG
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MVRFFDALETREPEVRDREQAAALPGLIQHAKDHAPAYARLLADIDPPAITSREALAALP
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHCC
VTRKSALISLQAEAPPFGGFATSRGAFSRVLQSPGPIYEPEGKRSDYWRLSRALFAAGFR
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PGDLVHNCFAYHFTPGGWIFDDGAQALGCPVFPAGTGQTEQQLQAIAALRPTAYVGTPSF
CHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHH
LAILLDKADYLGADISSLKKGLVSAEAYLPPQRTLFAERGIPTYQCYSTADLGLIAYESP
HHHHHHCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCEEEEECCC
DDSGAVEGMVVDEGVILEIVRPGTGDLVAPGEVGEVLVTTFTPEYPLIRFATGDLSATLP
CCCCCCCEEEECCCEEEEEECCCCCCEECCCCCCCEEEEEECCCCCEEEEECCCCEEECC
GPSPCGRTNMRIKGWMGRADQTTKVKGMFVHPQQVADVVRRHDALAKARLIVTRIEGGDV
CCCCCCCCCCEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEECCCCE
MTLVCETTETLDLADQVAESLRVVTKLRGEVRFVTPGSLPNDGKVIEDARDYG
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]