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The map label for this gene is 83594830

Identifier: 83594830

GI number: 83594830

Start: 4028971

End: 4029768

Strand: Reverse

Name: 83594830

Synonym: Rru_A3501

Alternate gene names: NA

Gene position: 4029768-4028971 (Counterclockwise)

Preceding gene: 83594833

Following gene: 83594829

Centisome position: 92.58

GC content: 65.79

Gene sequence:

>798_bases
ATGCCCGACGTCTCGCTTCGTTCCCACTTTTTACGCGCTTGCGCCCTTGCCGCCCTGTCGGTCTTCGCCGCCCTGCCCGC
CCAGGCCCATTTCCAGGAACTGATCCCCGATCCGCCGCTGGTCGGCGAGGTGACGGGCGGCAAGGTCACGCTGTCGGCGA
CCTTCACCCATCCGATGCAGAACGGCCCGGTGATGGCGATGGGCAAACCGGCGCGCTTCGCGGTGACGGTCGACGGTCAG
ACCACTTCGTTGCTCAACAGCCTCTCGCCGGTCGTCATCGACGGCAAGGCGGCCTATCGCGCCGAGTTCACCGCCAAGAA
GCCGGGCGATTACATTTTCTGGATCGAGCCCGCCCCCTATTGGGAGCCGGCGGAAGGCGTGATGATCGTCCATTACACCA
AGGTGGTGGTCGATGCCTTCGGCGCCGATGAGGGGTGGGACGCCGCCGTCGGCCTGCCCGTCGAGATCCTGCCGCTGACC
CGCCCCTATGGGCTTTATACCGGCAACGTCTTTTCGGGCGTCGTCACCCGCGACGGCAAGCCGGTGCCCGGGGCCGTCGT
CGAAGTAGAATACCGCAGCCAAGGCACGATCACCGCGCCCGACGATGTCTTCGTCACCCAGGTGGTCAAGGCCGATGGCG
GCGGAACCTTCCATTTCGCCATGCCTAAGGCCGGCTGGTGGGGCTTTGCCGCCCTGCTTGAAGGGCCCAAGCCGATGACC
AGTCCGACGGGCGAAAGCGTGCCGGTGGAGGAAGGCGCCCTGCTCTGGGTCCATACGGTCGATATGCCCGCCAAATAA

Upstream 100 bases:

>100_bases
CCGCCTTAGGGTCGCTGCCGCAAAACATTATGCGACGCGGTATATAGCTGAGCCAACCCTGATCCCTTTCCGCTCCTCGC
GCTCAAAGGACTCGAGACCA

Downstream 100 bases:

>100_bases
GGCCGGCGAGACTCTTGTTTTAGCCAAAGGATCAAGGCCATGCATATCGCCGAGGGGATCGTCCCGCTCTCCGTGGCGGC
GCCGCTGACGGTCGTCGCCG

Product: putative lipoprotein

Products: NA

Alternate protein names: ABC-Type Co2+ Transport System Periplasmic Component; Nickel Transport Complex Subunit NikM; Lipoprotein; ATP-Dependent DNA Ligase; NikK Nickel ECF Transporter

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPDVSLRSHFLRACALAALSVFAALPAQAHFQELIPDPPLVGEVTGGKVTLSATFTHPMQNGPVMAMGKPARFAVTVDGQ
TTSLLNSLSPVVIDGKAAYRAEFTAKKPGDYIFWIEPAPYWEPAEGVMIVHYTKVVVDAFGADEGWDAAVGLPVEILPLT
RPYGLYTGNVFSGVVTRDGKPVPGAVVEVEYRSQGTITAPDDVFVTQVVKADGGGTFHFAMPKAGWWGFAALLEGPKPMT
SPTGESVPVEEGALLWVHTVDMPAK

Sequences:

>Translated_265_residues
MPDVSLRSHFLRACALAALSVFAALPAQAHFQELIPDPPLVGEVTGGKVTLSATFTHPMQNGPVMAMGKPARFAVTVDGQ
TTSLLNSLSPVVIDGKAAYRAEFTAKKPGDYIFWIEPAPYWEPAEGVMIVHYTKVVVDAFGADEGWDAAVGLPVEILPLT
RPYGLYTGNVFSGVVTRDGKPVPGAVVEVEYRSQGTITAPDDVFVTQVVKADGGGTFHFAMPKAGWWGFAALLEGPKPMT
SPTGESVPVEEGALLWVHTVDMPAK
>Mature_264_residues
PDVSLRSHFLRACALAALSVFAALPAQAHFQELIPDPPLVGEVTGGKVTLSATFTHPMQNGPVMAMGKPARFAVTVDGQT
TSLLNSLSPVVIDGKAAYRAEFTAKKPGDYIFWIEPAPYWEPAEGVMIVHYTKVVVDAFGADEGWDAAVGLPVEILPLTR
PYGLYTGNVFSGVVTRDGKPVPGAVVEVEYRSQGTITAPDDVFVTQVVKADGGGTFHFAMPKAGWWGFAALLEGPKPMTS
PTGESVPVEEGALLWVHTVDMPAK

Specific function: Unknown

COG id: COG5266

COG function: function code P; ABC-type Co2+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28193; Mature: 28061

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVSLRSHFLRACALAALSVFAALPAQAHFQELIPDPPLVGEVTGGKVTLSATFTHPMQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCC
NGPVMAMGKPARFAVTVDGQTTSLLNSLSPVVIDGKAAYRAEFTAKKPGDYIFWIEPAPY
CCCEEEECCCEEEEEEECCCHHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCC
WEPAEGVMIVHYTKVVVDAFGADEGWDAAVGLPVEILPLTRPYGLYTGNVFSGVVTRDGK
CCCCCCEEEEEEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCEEECCCEEEEEECCCC
PVPGAVVEVEYRSQGTITAPDDVFVTQVVKADGGGTFHFAMPKAGWWGFAALLEGPKPMT
CCCCEEEEEEECCCCCEECCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCC
SPTGESVPVEEGALLWVHTVDMPAK
CCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
PDVSLRSHFLRACALAALSVFAALPAQAHFQELIPDPPLVGEVTGGKVTLSATFTHPMQ
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCC
NGPVMAMGKPARFAVTVDGQTTSLLNSLSPVVIDGKAAYRAEFTAKKPGDYIFWIEPAPY
CCCEEEECCCEEEEEEECCCHHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCC
WEPAEGVMIVHYTKVVVDAFGADEGWDAAVGLPVEILPLTRPYGLYTGNVFSGVVTRDGK
CCCCCCEEEEEEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCEEECCCEEEEEECCCC
PVPGAVVEVEYRSQGTITAPDDVFVTQVVKADGGGTFHFAMPKAGWWGFAALLEGPKPMT
CCCCEEEEEEECCCCCEECCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCC
SPTGESVPVEEGALLWVHTVDMPAK
CCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA