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The map label for this gene is asnC [C]

Identifier: 83594797

GI number: 83594797

Start: 3993521

End: 3993946

Strand: Direct

Name: asnC [C]

Synonym: Rru_A3468

Alternate gene names: 83594797

Gene position: 3993521-3993946 (Clockwise)

Preceding gene: 83594794

Following gene: 83594804

Centisome position: 91.75

GC content: 67.14

Gene sequence:

>426_bases
ATGACCCTTGATGATCTTGATCGTCGGCTGATCGGCCTGCTGCGCGAGGATGCGCGGCTGCCGGTGTCCTCGCTCGCCCA
TGCCCTGGGGGTATCGCGCGGCACCGTGCAAAACCGCATCGATCGTCTGCGCGACAGCGGCGAGGTTCTGGGGTTTACGC
TGCGGCTGCGCTCGGAAGCCGGATCGGGGGTGCGCGCGGTGTGCCTAGTCTCGGAACAAACCCGCGACGCTTCGGCCATC
CTCGCCGCGCTCAAGCGCATTCCCGAAGCGCGCGGCGTGCATACCACCAACGGCCGCTGGGACATCATGGTCGATCTGGC
CGCCGATACCCTGGAAGACCTTGACCGGGCGATCGGCCAGATCCGCGCCCTGGGCGGCGTCACCGATACGGAAACCCTGG
TTCTGCTGACGCCGCACAAGGGGTAG

Upstream 100 bases:

>100_bases
GCGAAATGCCAGAAATAAAGCAGTATGCTAGGCATCCCGCGCAAACTGTCAGAGCCGCCGCGAAGATGGGCGCTGTGGGG
TTGGCCGATAAGGAGCGCCC

Downstream 100 bases:

>100_bases
AGCGGCGGGCGGAAAGGCAGACACCGGCCTTCCGCGCCATCGCCGCTCTACGATCTTGATCGTCGGGCAAATCGTCGTCG
CACTTTGGTTCCGATCGCTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTLDDLDRRLIGLLREDARLPVSSLAHALGVSRGTVQNRIDRLRDSGEVLGFTLRLRSEAGSGVRAVCLVSEQTRDASAI
LAALKRIPEARGVHTTNGRWDIMVDLAADTLEDLDRAIGQIRALGGVTDTETLVLLTPHKG

Sequences:

>Translated_141_residues
MTLDDLDRRLIGLLREDARLPVSSLAHALGVSRGTVQNRIDRLRDSGEVLGFTLRLRSEAGSGVRAVCLVSEQTRDASAI
LAALKRIPEARGVHTTNGRWDIMVDLAADTLEDLDRAIGQIRALGGVTDTETLVLLTPHKG
>Mature_140_residues
TLDDLDRRLIGLLREDARLPVSSLAHALGVSRGTVQNRIDRLRDSGEVLGFTLRLRSEAGSGVRAVCLVSEQTRDASAIL
AALKRIPEARGVHTTNGRWDIMVDLAADTLEDLDRAIGQIRALGGVTDTETLVLLTPHKG

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 15262; Mature: 15130

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDDLDRRLIGLLREDARLPVSSLAHALGVSRGTVQNRIDRLRDSGEVLGFTLRLRSEA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
GSGVRAVCLVSEQTRDASAILAALKRIPEARGVHTTNGRWDIMVDLAADTLEDLDRAIGQ
CCCEEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
IRALGGVTDTETLVLLTPHKG
HHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
TLDDLDRRLIGLLREDARLPVSSLAHALGVSRGTVQNRIDRLRDSGEVLGFTLRLRSEA
CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
GSGVRAVCLVSEQTRDASAILAALKRIPEARGVHTTNGRWDIMVDLAADTLEDLDRAIGQ
CCCEEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
IRALGGVTDTETLVLLTPHKG
HHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA