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The map label for this gene is htrII [H]

Identifier: 83594794

GI number: 83594794

Start: 3989843

End: 3991102

Strand: Direct

Name: htrII [H]

Synonym: Rru_A3465

Alternate gene names: 83594794

Gene position: 3989843-3991102 (Clockwise)

Preceding gene: 83594793

Following gene: 83594797

Centisome position: 91.66

GC content: 67.78

Gene sequence:

>1260_bases
GTGCTTACCGTGGTTTTGGGCGGGGCGGTGGCGAGCCTCGCCGTGGCCTCGAACGACTGGCTTGATCTTGGGCTGGCCGG
CGGGCTTGTTTTGGCCGGCGGAATGGCGCTGATCCTTCTGCGTAGTCTGAAGGCTCAGATCGCCAAGGCCTCGGATGTGG
CGGCGGCGGCGCGGGGTGACCTCGGCGCCCGCATCATGGGGATCGGCGGCACCGGGGAAATCCCCCGGATGCACTACAAT
ATCAATCATCTGTTGGATGTGACCGAGGCTTTCGCCCGGGAATCGGGCGCGGCCTTGTCCTTTGCCAGCCGGGGCGAATA
CTACCGCAAGATCTTGCGGCGCGGCATGGTCGGCGATTTCGGTCGCTATGGCGACACGGTCAATGCCGGGCTGGAGGCCA
TGGACCGCAAGACCCGGGGCTTCCACGAGTCGGCTAGCGAGATGGGCGACAAGATCATGCATGTCGTCCATTCCGTCGCC
AGCGCCGCCGCCCAGCTTCAGGCCTCGGCGTCGAGCCTGGGCGATATGGCGCGCTCGACCGATGACCAGTCGGTCCGCGT
GGCCGATGCCGCCCGCGACGCCTCGGCCAATGTCTCCGGCGTCGCCGCCGCCACCGAGGAATTCTCGGCCTCGATCACCG
ATGTCGCCCATCAGGTGGAACGCACCTCGCAAGTCGCCCATAACGCGGTGGTGACGGCGGGCAAGGCCGAAAGCACGATC
AATACCCTGGCCCAGGCTTCGGCCCGCATCGGCGAGGTCGTCGGCCTGATCAACGATATCGCCAGCCAGACCAATCTGCT
GGCGCTTAACGCCACCATCGAGGCGGCGCGGGCCGGCGAGGCGGGCAAGGGCTTCGCCGTGGTCGCCGGCGAGGTCAAGA
CCCTGGCCCAGCAAACGGCGCGGGCCACCGACGAGATCGTCGGCCAGATCGAGGGCATGCGGACCGCCACCCATGAAGCG
GTTCTCGCCATCCAGGGCATCGGCGAAACCATCCGCGAAATCAGCGAGGCCGCCCAGGCCATTCACCACGCCATCAGCGA
GCAGCGCGCGGTGGTTGGCGAGATCGCCGGCAATGTCCACCGGGCGGTCGATGGCGTGCGCATCGTCGCCGAGGGCATCG
CCACCGTGGCCGGCAGCGTTCGCGAGGCCACCGGCGCCGTCGAGGAGATCACCGGCGCGGCCAACGACCTGTCGTGCAAC
AGCGAAGGCTTGAGCGGCGATGTCGCCCGCTTCATCACGCAGGTTTCCGCCTCGCGCTGA

Upstream 100 bases:

>100_bases
CGTATCTTCGCCGGAATGAACTTCATCGATCGCATGCTCGGTCAAAGGGGGGTGAGTTATGATCGCTTTATCCACAGTCT
CTAAGCTCACCCTGTGCGGG

Downstream 100 bases:

>100_bases
TCGGCGCCCCCCGCTCGCACAGCGAAAAACCCCCCGGCATGGGGGGCCGGGGGGTAAGGAGTCTTTGGTCTAGAAGATCA
GGAAAAGCGCTTGGTTAACC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: HTR-II; Methyl-accepting phototaxis protein II; MPP-II [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MLTVVLGGAVASLAVASNDWLDLGLAGGLVLAGGMALILLRSLKAQIAKASDVAAAARGDLGARIMGIGGTGEIPRMHYN
INHLLDVTEAFARESGAALSFASRGEYYRKILRRGMVGDFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVA
SAAAQLQASASSLGDMARSTDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTI
NTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIEGMRTATHEA
VLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCN
SEGLSGDVARFITQVSASR

Sequences:

>Translated_419_residues
MLTVVLGGAVASLAVASNDWLDLGLAGGLVLAGGMALILLRSLKAQIAKASDVAAAARGDLGARIMGIGGTGEIPRMHYN
INHLLDVTEAFARESGAALSFASRGEYYRKILRRGMVGDFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVA
SAAAQLQASASSLGDMARSTDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTI
NTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIEGMRTATHEA
VLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCN
SEGLSGDVARFITQVSASR
>Mature_419_residues
MLTVVLGGAVASLAVASNDWLDLGLAGGLVLAGGMALILLRSLKAQIAKASDVAAAARGDLGARIMGIGGTGEIPRMHYN
INHLLDVTEAFARESGAALSFASRGEYYRKILRRGMVGDFGRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVA
SAAAQLQASASSLGDMARSTDDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTI
NTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTARATDEIVGQIEGMRTATHEA
VLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVHRAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCN
SEGLSGDVARFITQVSASR

Specific function: Transduces signals from the phototaxis receptor sensory rhodopsin II (SR-II) to the flagellar motor. Responds to light changes through the variation of the level of methylation. Also acts as a chemotransducer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=223, Percent_Identity=33.6322869955157, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789453, Length=236, Percent_Identity=30.0847457627119, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI2367378, Length=221, Percent_Identity=33.9366515837104, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=163, Percent_Identity=38.0368098159509, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787690, Length=230, Percent_Identity=32.6086956521739, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 42944; Mature: 42944

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVVLGGAVASLAVASNDWLDLGLAGGLVLAGGMALILLRSLKAQIAKASDVAAAARGD
CEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGARIMGIGGTGEIPRMHYNINHLLDVTEAFARESGAALSFASRGEYYRKILRRGMVGDF
CCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHCCCCCCH
GRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMARST
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTI
CCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHH
NTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
RATDEIVGQIEGMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQVSASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTVVLGGAVASLAVASNDWLDLGLAGGLVLAGGMALILLRSLKAQIAKASDVAAAARGD
CEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGARIMGIGGTGEIPRMHYNINHLLDVTEAFARESGAALSFASRGEYYRKILRRGMVGDF
CCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHCCCCCCH
GRYGDTVNAGLEAMDRKTRGFHESASEMGDKIMHVVHSVASAAAQLQASASSLGDMARST
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DDQSVRVADAARDASANVSGVAAATEEFSASITDVAHQVERTSQVAHNAVVTAGKAESTI
CCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHH
NTLAQASARIGEVVGLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKTLAQQTA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
RATDEIVGQIEGMRTATHEAVLAIQGIGETIREISEAAQAIHHAISEQRAVVGEIAGNVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAVDGVRIVAEGIATVAGSVREATGAVEEITGAANDLSCNSEGLSGDVARFITQVSASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7708770 [H]