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The map label for this gene is 83594785

Identifier: 83594785

GI number: 83594785

Start: 3980536

End: 3981546

Strand: Direct

Name: 83594785

Synonym: Rru_A3456

Alternate gene names: NA

Gene position: 3980536-3981546 (Clockwise)

Preceding gene: 83594784

Following gene: 83594786

Centisome position: 91.45

GC content: 63.6

Gene sequence:

>1011_bases
ATGCTGTTCCGTCGTTCGCTTGCCGTCGGTCTGACCCTTGCCGCCCTTGGCGCCGGCCCCGCCTCGGCGCTCGATAAGCT
GACGCTCCAGCTCAAATGGGTGACCCAGGCCCAGTTCGCCGGCTATTACGTGGCCGAGGCCAAGGGCTTCTATAAGGATG
AGGGCCTTGATGTCACCATCCGCTCAGGCGGTCCCGACATCAATCCCAGTCAGGTGATCGCCGGCGGCGGCGCCGATGTG
GTGCTCGACTGGATGCCAAGCGCCCTGGCGACCCGCGAAAAGGGCGTGCCGCTGGTCAATATCGCCCAGATCTTCCAGAA
GTCGGGCATGATGCTGACCTGCCGCAAGGATGCCGGCATCACCAAGCCCGAGGATTTCAAGGGCCGCACCCTGGGCGTCT
GGTACGGCGGCAACGAGCATCCGTTCTTCGCCTGGATGAGCAAGCTGGGCTATTCGACCAGCGGCGCCCATCCCGATGTG
ACCATCCTCAAGCAGGGTTTCAACGTCGACCCGATCTTGCAAAATCAGGCGCCCTGCATCTCGACGACCACCTATAACGA
ATACTGGCAGGTGGTGGATGGCGGCATTCCGGTCGATGATCTGCTGAACTTCAAATACGAGGATCAGGGCGTCGCCACCT
TGGAAGACGGCTTCTGGGTGCTGGCCAAGGATCTTGAGGATCCGGCCAAGGTCGACAAACTGGCCCGCCTTGTCCGCGCG
ACGATGAAGGGCTGGCGCTACGCCCTGGAAAACCAGGAGGACTCGGTGGGCATCGTTCTTGATAACGACACCTCGGGCGC
CCAGACCGAACAGCATCAGGCCCGCATGCTGGGCGAGGTTTCGCGCTTGATCGACAAGGACGGACGCCAGCCCGGCGTGC
TTGACCCGGCCGATGCCGAGCGCACCGTCGATATCCTGCTGGCCGGCGCCTCGACCCCGGTCATCACCACCCGGCCGGTC
GGCGCCTGGACCAGCGTCGTCACCGACAAGGCTTTCGGCGCGGCGAAATAG

Upstream 100 bases:

>100_bases
GCGGGCGCTGACGCCGCGCCGGTTTTCCCAGATCAACCGGGAGCCACTTTTACGCTCGCCGCTCTAACGCAGCCCAACGT
TCTCCGGGAGGGAGTCTTCC

Downstream 100 bases:

>100_bases
GCCACGGCCCGCCGCCGCCTTGACTTCGCCACGGACCGGCTCGACGATGCCGGTCCGTTTTTTATCACGATCAAGGATGC
CGTTATGAAGCGCATGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; Histidine Kinase; NMT1/THI5 Like Domain-Containing Protein; ABC Transporter Periplasmic; GGDEF Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; NMT1/THI5 Like Family; Thiamine Biosynthesis Protein; Secreted Protein; NMT1/THI5-Like Protein; NMT1/THI5-Like Family; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; NLPA Lipoprotein; PAS/PAC Sensor-Containg Diguanylate Cyclase; Diguanylate Cyclase/Phosphodiesterase; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; ThiY Protein; Diguanylate Cyclase With PAS/PAC Sensor; PAS/GGDEF Domain-Containing Protein; Signal Transduction Response Regulator; Two-Component Sensor Histidine Kinase; ABC Transporter; Periplasmic-Component Of ABC Transporter; Sensory Box Histidine Kinase; PasGgdef; Two-Component Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Signal Transduction Protein; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; NlpA Lipoprotein; Sensory Transduction Histidine Kinase; Pyrimidine Biosynthesis; NMT1/THI5-Ike Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; PAS/PAC Sensor-Containing Diguanylate Cyclase; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLFRRSLAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTIRSGGPDINPSQVIAGGGADV
VLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGITKPEDFKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDV
TILKQGFNVDPILQNQAPCISTTTYNEYWQVVDGGIPVDDLLNFKYEDQGVATLEDGFWVLAKDLEDPAKVDKLARLVRA
TMKGWRYALENQEDSVGIVLDNDTSGAQTEQHQARMLGEVSRLIDKDGRQPGVLDPADAERTVDILLAGASTPVITTRPV
GAWTSVVTDKAFGAAK

Sequences:

>Translated_336_residues
MLFRRSLAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTIRSGGPDINPSQVIAGGGADV
VLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGITKPEDFKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDV
TILKQGFNVDPILQNQAPCISTTTYNEYWQVVDGGIPVDDLLNFKYEDQGVATLEDGFWVLAKDLEDPAKVDKLARLVRA
TMKGWRYALENQEDSVGIVLDNDTSGAQTEQHQARMLGEVSRLIDKDGRQPGVLDPADAERTVDILLAGASTPVITTRPV
GAWTSVVTDKAFGAAK
>Mature_336_residues
MLFRRSLAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTIRSGGPDINPSQVIAGGGADV
VLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGITKPEDFKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDV
TILKQGFNVDPILQNQAPCISTTTYNEYWQVVDGGIPVDDLLNFKYEDQGVATLEDGFWVLAKDLEDPAKVDKLARLVRA
TMKGWRYALENQEDSVGIVLDNDTSGAQTEQHQARMLGEVSRLIDKDGRQPGVLDPADAERTVDILLAGASTPVITTRPV
GAWTSVVTDKAFGAAK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36340; Mature: 36340

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFRRSLAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTI
CCCCHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEHHHHCCEEEECCCCCCCCCCCEEEE
RSGGPDINPSQVIAGGGADVVLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGI
CCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCCCCEEHHHHHHHHCCCEEEEECCCCC
TKPEDFKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDVTILKQGFNVDPILQNQAPCI
CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCEE
STTTYNEYWQVVDGGIPVDDLLNFKYEDQGVATLEDGFWVLAKDLEDPAKVDKLARLVRA
EECCHHHHHHHHCCCCCHHHHHCCEECCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHH
TMKGWRYALENQEDSVGIVLDNDTSGAQTEQHQARMLGEVSRLIDKDGRQPGVLDPADAE
HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RTVDILLAGASTPVITTRPVGAWTSVVTDKAFGAAK
CEEEEEEECCCCCEEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLFRRSLAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTI
CCCCHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEHHHHCCEEEECCCCCCCCCCCEEEE
RSGGPDINPSQVIAGGGADVVLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGI
CCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCCCCEEHHHHHHHHCCCEEEEECCCCC
TKPEDFKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDVTILKQGFNVDPILQNQAPCI
CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCEE
STTTYNEYWQVVDGGIPVDDLLNFKYEDQGVATLEDGFWVLAKDLEDPAKVDKLARLVRA
EECCHHHHHHHHCCCCCHHHHHCCEECCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHH
TMKGWRYALENQEDSVGIVLDNDTSGAQTEQHQARMLGEVSRLIDKDGRQPGVLDPADAE
HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RTVDILLAGASTPVITTRPVGAWTSVVTDKAFGAAK
CEEEEEEECCCCCEEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA