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The map label for this gene is ssuC [C]

Identifier: 83594784

GI number: 83594784

Start: 3979478

End: 3980446

Strand: Direct

Name: ssuC [C]

Synonym: Rru_A3455

Alternate gene names: 83594784

Gene position: 3979478-3980446 (Clockwise)

Preceding gene: 83594783

Following gene: 83594785

Centisome position: 91.42

GC content: 69.25

Gene sequence:

>969_bases
ATGATCCACACCACCCTCGCCCGCCCCGGCGGACCGACGCGCACCCCCTGGCTGCTCGCCCTGGGCGCCCTGCTGGCGAT
GACCGCCGCCTTCCGCGCCCTTGAAGGCGGCGATCTCGGCGAGGTCGGGCTGTGGAGCGCCATCACCACCTTCCTCGCTT
GGCATGGCATGGACCGTCTGGCCGGCCTGCCCGTTGGCGCCGGACAGCGCGCCGCCCGGCTGGCCGTGCCGCTGCTGTTT
GGTCTGTGGCTGCTGTTTTGCTGGGAAATGGCCGTTCGGGTTTTCGATGTGCCCAAGGTGCTGTTGCCTGCCCCTTCGGC
GGTGGCGCTGGCCCTGGCCACCCATGCCCCCACCCTGTGGGCCGATTTCGTCCAAACCGTGCTGCGCGGCGCGCTGGCCG
GCTATGTGCTGGGCTCGCTGCTTGGCGCCCTGCTGGCCCTGGCCTGTGATCGCGTGCCGTTCCTGGCGCGCGGCCTTTTG
CCGATCGCCAGCTTGGCCGGAGCCGTGCCGATCATCGGCATCGCCCCGATCATGGTGATGTGGTTCGGCTTCGACTGGCC
GTCGAAGGCCGCCGTCGTCGTCGTGATGACGCTGTTTCCCATGCTGGTCAACACCCTGGCCGGCCTGCGCGCCGCCGAGC
CCGAGCAGCTTGATCTGATGCGCAGCTATGCGGCGGGCTGGGGGCGGACCCTGGTGCTGCTGCGCCTGCCCGCGGCCCTG
CCGTTTCTGTTCAACGGCCTGAAGATCAACGCCACCCTGGCGCTGATCGGCGCCATCGTCGCCGAGTTCTTCGGCACGCC
GATCGTCGGCATGGGCTTTCGCATCTCGACCGAGGTGTCGCGGATGAACACCGATATCGTCTGGGCGAGCATCGCCGTCG
CCGCCGTCGCCGGATCGGGGTTCTATGGCCTGCTCGCCCTTTTGGAAAAGCGCCTGACCCATTGGCATCCATCGGCCGGC
GGGCGCTGA

Upstream 100 bases:

>100_bases
TGTGGGCGGCCCTGGTGATGGCCGCCGCGCTGTCGCTGTTCCTGGTTTTCCTGGTTGGACGGGCGGAATGGCTGGTGCGC
CGGCTGACGGGGGGCTTCGT

Downstream 100 bases:

>100_bases
CGCCGCGCCGGTTTTCCCAGATCAACCGGGAGCCACTTTTACGCTCGCCGCTCTAACGCAGCCCAACGTTCTCCGGGAGG
GAGTCTTCCATGCTGTTCCG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIHTTLARPGGPTRTPWLLALGALLAMTAAFRALEGGDLGEVGLWSAITTFLAWHGMDRLAGLPVGAGQRAARLAVPLLF
GLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLWADFVQTVLRGALAGYVLGSLLGALLALACDRVPFLARGLL
PIASLAGAVPIIGIAPIMVMWFGFDWPSKAAVVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAAL
PFLFNGLKINATLALIGAIVAEFFGTPIVGMGFRISTEVSRMNTDIVWASIAVAAVAGSGFYGLLALLEKRLTHWHPSAG
GR

Sequences:

>Translated_322_residues
MIHTTLARPGGPTRTPWLLALGALLAMTAAFRALEGGDLGEVGLWSAITTFLAWHGMDRLAGLPVGAGQRAARLAVPLLF
GLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLWADFVQTVLRGALAGYVLGSLLGALLALACDRVPFLARGLL
PIASLAGAVPIIGIAPIMVMWFGFDWPSKAAVVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAAL
PFLFNGLKINATLALIGAIVAEFFGTPIVGMGFRISTEVSRMNTDIVWASIAVAAVAGSGFYGLLALLEKRLTHWHPSAG
GR
>Mature_322_residues
MIHTTLARPGGPTRTPWLLALGALLAMTAAFRALEGGDLGEVGLWSAITTFLAWHGMDRLAGLPVGAGQRAARLAVPLLF
GLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLWADFVQTVLRGALAGYVLGSLLGALLALACDRVPFLARGLL
PIASLAGAVPIIGIAPIMVMWFGFDWPSKAAVVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAAL
PFLFNGLKINATLALIGAIVAEFFGTPIVGMGFRISTEVSRMNTDIVWASIAVAAVAGSGFYGLLALLEKRLTHWHPSAG
GR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=234, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786564, Length=241, Percent_Identity=29.4605809128631, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34049; Mature: 34049

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHTTLARPGGPTRTPWLLALGALLAMTAAFRALEGGDLGEVGLWSAITTFLAWHGMDRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHH
AGLPVGAGQRAARLAVPLLFGLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHH
ADFVQTVLRGALAGYVLGSLLGALLALACDRVPFLARGLLPIASLAGAVPIIGIAPIMVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
WFGFDWPSKAAVVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAAL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
PFLFNGLKINATLALIGAIVAEFFGTPIVGMGFRISTEVSRMNTDIVWASIAVAAVAGSG
HHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC
FYGLLALLEKRLTHWHPSAGGR
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIHTTLARPGGPTRTPWLLALGALLAMTAAFRALEGGDLGEVGLWSAITTFLAWHGMDRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHH
AGLPVGAGQRAARLAVPLLFGLWLLFCWEMAVRVFDVPKVLLPAPSAVALALATHAPTLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCHHH
ADFVQTVLRGALAGYVLGSLLGALLALACDRVPFLARGLLPIASLAGAVPIIGIAPIMVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
WFGFDWPSKAAVVVVMTLFPMLVNTLAGLRAAEPEQLDLMRSYAAGWGRTLVLLRLPAAL
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
PFLFNGLKINATLALIGAIVAEFFGTPIVGMGFRISTEVSRMNTDIVWASIAVAAVAGSG
HHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC
FYGLLALLEKRLTHWHPSAGGR
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]