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The map label for this gene is 83594783

Identifier: 83594783

GI number: 83594783

Start: 3978585

End: 3979481

Strand: Direct

Name: 83594783

Synonym: Rru_A3454

Alternate gene names: NA

Gene position: 3978585-3979481 (Clockwise)

Preceding gene: 83594782

Following gene: 83594784

Centisome position: 91.4

GC content: 68.34

Gene sequence:

>897_bases
ATGGCCACTAACGCCAAGGGACCGGCCGCTTGGGTCGGACGGGCCTTTCCCGTTCTCGTCGTCGGCGCGGTCTTGCTGTG
CCTGTGGTACGCGGCGGCCCTTTTGCTCAATCAAGGGCTGGTCGACCAGGCGATGGTGCGCTCGGGCCAGCAGTGGTCGA
TCGGCCAGCGCCTGGAAGCCGCCGCCACCCACCAGCGGCCGATCCTGCCGACCCCGGTTCAGGTCGGGGCCGAACTGTGG
AAAAGCGTGGTGATGACCAAGCCGACCAGCCCACGCGGCCTGCTGCTCCATACCGGGGTGACCGGGGCGTCGACCCTGGT
CGGCTTCGTGCTTGGCACGCTGCTGGGCTTGGTGATCGCCGTGGGCATCGTTCGCTTCCGCGTGCTCGAAGCCAGCCTGC
TGCCCTGGGTGATCGCCAGCCAAACCATCCCCATCCTGGCGATCGCGCCGATGGTGGTGGTGGTGCTGGGCGCCATCGGC
CTGACCGGGTTGGTGCCCAAGGCGATCATCAGCATGTATCTGTGCTTCTTCCCCGTCACCGTCGGCATGGTCAAGGGCCT
GCGCTCGGCCGACGCGCTGTCGATGGATCTGATGCGCACCTATGCCGCCCGGCCCTCCCAGGTGTTCTGGCGGCTGCGCC
TGCCCGCCGCCCTGCCCTATCTGTTCGCCAGCATGAAGGTGGCGATCGCCGCCGCCCTGGTTGGCGCCATCGTCGGCGAA
TTGCCGACGGGGGCGGCGATGGGTCTGGGCGCCCGGCTGCTGGCGGGCAGTTATTATGGTCAGACCGTGCAGATGTGGGC
GGCCCTGGTGATGGCCGCCGCGCTGTCGCTGTTCCTGGTTTTCCTGGTTGGACGGGCGGAATGGCTGGTGCGCCGGCTGA
CGGGGGGCTTCGTATGA

Upstream 100 bases:

>100_bases
TGCTCCGGGCTGCCCCGCGTGCGCACGGCGGCCCTGCGCGACGCGCCGGAGTTTCGCGCCCTGGCCGCCCGGGTGCGCCT
GGGTCTGCGGGAAGGCCATG

Downstream 100 bases:

>100_bases
TCCACACCACCCTCGCCCGCCCCGGCGGACCGACGCGCACCCCCTGGCTGCTCGCCCTGGGCGCCCTGCTGGCGATGACC
GCCGCCTTCCGCGCCCTTGA

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MATNAKGPAAWVGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEAAATHQRPILPTPVQVGAELW
KSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIG
LTGLVPKAIISMYLCFFPVTVGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGE
LPTGAAMGLGARLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAEWLVRRLTGGFV

Sequences:

>Translated_298_residues
MATNAKGPAAWVGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEAAATHQRPILPTPVQVGAELW
KSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIG
LTGLVPKAIISMYLCFFPVTVGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGE
LPTGAAMGLGARLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAEWLVRRLTGGFV
>Mature_297_residues
ATNAKGPAAWVGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEAAATHQRPILPTPVQVGAELWK
SVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIGL
TGLVPKAIISMYLCFFPVTVGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGEL
PTGAAMGLGARLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAEWLVRRLTGGFV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31427; Mature: 31296

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNAKGPAAWVGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH
AATHQRPILPTPVQVGAELWKSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIA
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
VGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIGLTGLVPKAIISMYLCFFPVT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTGAAMGLGARLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAEWLVRRLTGGFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATNAKGPAAWVGRAFPVLVVGAVLLCLWYAAALLLNQGLVDQAMVRSGQQWSIGQRLEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHH
AATHQRPILPTPVQVGAELWKSVVMTKPTSPRGLLLHTGVTGASTLVGFVLGTLLGLVIA
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
VGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIGLTGLVPKAIISMYLCFFPVT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFASMKVAIAAALVGAIVGE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPTGAAMGLGARLLAGSYYGQTVQMWAALVMAAALSLFLVFLVGRAEWLVRRLTGGFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]