Click here to switch to the map view.

The map label for this gene is 83594771

Identifier: 83594771

GI number: 83594771

Start: 3963697

End: 3964728

Strand: Reverse

Name: 83594771

Synonym: Rru_A3442

Alternate gene names: NA

Gene position: 3964728-3963697 (Counterclockwise)

Preceding gene: 83594772

Following gene: 83594770

Centisome position: 91.08

GC content: 62.02

Gene sequence:

>1032_bases
ATGGACTACTATGCCGGCATCGACGTTTCATTGGAACTGAGCAGCGTGTGCATCGTGAACCAGGATGGCAAGATCTTTCG
GGAAGTGAAGGTGGCGAGCGATCCGGAAGCGCTGATTGGCCTGTTCGGCGGGCTTGGTGTGACGCTGAGCCGGATCGGCC
TGGAAGCCGGACCGTTATCGCAGTGGCTGCACGCCGGACTGACGGCTGGCGGATACGATGTGGTTCTTTTGGAAACCCGT
CATGTCAAAGCCGGACTGTCGGCGATGACGGTGAAGACCGACCGCAAGGATGCGCGTGGCATCGCCCATTTGCTGCGGAT
GGGGTGGTTCCGTCCGGTGCATTGCAAAACCAACTCGGCCCAGGAAATCCGGGTGCTGCTGGTGGGGCGCAAGCTTCTGC
AAAGCAAGATGGGAGACCTCGAGCAAGGCATTCGCGGCCTGCTGCGCGGCTTCGGCCTCAAAGTCGGGGTCATTAGCAAG
GGGCGGTTCGCCGCCCGCATCCGCGAATTGGTGGCCGGGCAAGCCATGTTGGAAACGGTCGCCGAGCCGATGCTGCGCGC
CCGCGATGCCTTGCGTGCGGAATTCACCCTTCTGCATCGCCAGATTTTGGCGATTGTGCGAAGGGACGACCTCTGCCGCC
GCCTGATGACGGTGCCGGGCGTCGGCCCCCTGGTGGCGCTTACCTTCAAAAGCGGGATTGATGATCCCAGTCGCTTTACC
TCGTCAAAGACGGTCGGCGCCCATTTCGGGTTGACCCCGAAGAAATATCAATCGGGCGAAACCGACATTACCGGAGGCAT
CACCCGCACCGGCGATGCCATGGTACGGATGGCGCTCTATGAGGCGGCGCAGGTGCTGCTAACCAGATCCCAGCGCTTCT
CAAGCTTGAAGCGCTGGGCCTTGGAGGTCGCCAAGCGACGCGGCATGAAGCGGGCCAAGGTGGCCCTGGCCCGCAAGTTG
GCCACGGTGCTCCATCGCATGTGGATCGATGGCAGCGACTTCCGTTGGGGGAAGGAGATCACCTCGGCGTAA

Upstream 100 bases:

>100_bases
TGGCCAGGAGTCTAGCCAGGCAAGGTGGCCATCCCCGAAGATGGTGTTGAAGAACCACGGGGTCCGAAGCGATCGGCCCC
AAGCATCGACGGGGATAGCC

Downstream 100 bases:

>100_bases
AAGGAAATAGCTTTCAGGTGGGACTGAACGGTTCCGCCTTCCGAGGTCCCGTCGCCGGGACGCGGAGTCCGTTGAAGCCG
CAAAGGGAGTTGTGCCCTGG

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MDYYAGIDVSLELSSVCIVNQDGKIFREVKVASDPEALIGLFGGLGVTLSRIGLEAGPLSQWLHAGLTAGGYDVVLLETR
HVKAGLSAMTVKTDRKDARGIAHLLRMGWFRPVHCKTNSAQEIRVLLVGRKLLQSKMGDLEQGIRGLLRGFGLKVGVISK
GRFAARIRELVAGQAMLETVAEPMLRARDALRAEFTLLHRQILAIVRRDDLCRRLMTVPGVGPLVALTFKSGIDDPSRFT
SSKTVGAHFGLTPKKYQSGETDITGGITRTGDAMVRMALYEAAQVLLTRSQRFSSLKRWALEVAKRRGMKRAKVALARKL
ATVLHRMWIDGSDFRWGKEITSA

Sequences:

>Translated_343_residues
MDYYAGIDVSLELSSVCIVNQDGKIFREVKVASDPEALIGLFGGLGVTLSRIGLEAGPLSQWLHAGLTAGGYDVVLLETR
HVKAGLSAMTVKTDRKDARGIAHLLRMGWFRPVHCKTNSAQEIRVLLVGRKLLQSKMGDLEQGIRGLLRGFGLKVGVISK
GRFAARIRELVAGQAMLETVAEPMLRARDALRAEFTLLHRQILAIVRRDDLCRRLMTVPGVGPLVALTFKSGIDDPSRFT
SSKTVGAHFGLTPKKYQSGETDITGGITRTGDAMVRMALYEAAQVLLTRSQRFSSLKRWALEVAKRRGMKRAKVALARKL
ATVLHRMWIDGSDFRWGKEITSA
>Mature_343_residues
MDYYAGIDVSLELSSVCIVNQDGKIFREVKVASDPEALIGLFGGLGVTLSRIGLEAGPLSQWLHAGLTAGGYDVVLLETR
HVKAGLSAMTVKTDRKDARGIAHLLRMGWFRPVHCKTNSAQEIRVLLVGRKLLQSKMGDLEQGIRGLLRGFGLKVGVISK
GRFAARIRELVAGQAMLETVAEPMLRARDALRAEFTLLHRQILAIVRRDDLCRRLMTVPGVGPLVALTFKSGIDDPSRFT
SSKTVGAHFGLTPKKYQSGETDITGGITRTGDAMVRMALYEAAQVLLTRSQRFSSLKRWALEVAKRRGMKRAKVALARKL
ATVLHRMWIDGSDFRWGKEITSA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37723; Mature: 37723

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYYAGIDVSLELSSVCIVNQDGKIFREVKVASDPEALIGLFGGLGVTLSRIGLEAGPLS
CCCCCCCEEEEEECEEEEECCCCCEEHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
QWLHAGLTAGGYDVVLLETRHVKAGLSAMTVKTDRKDARGIAHLLRMGWFRPVHCKTNSA
HHHHCCCCCCCEEEEEEECCHHHCCCHHEEEECCCHHHHHHHHHHHHCCCCCEECCCCCH
QEIRVLLVGRKLLQSKMGDLEQGIRGLLRGFGLKVGVISKGRFAARIRELVAGQAMLETV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AEPMLRARDALRAEFTLLHRQILAIVRRDDLCRRLMTVPGVGPLVALTFKSGIDDPSRFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCHHHHC
SSKTVGAHFGLTPKKYQSGETDITGGITRTGDAMVRMALYEAAQVLLTRSQRFSSLKRWA
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVAKRRGMKRAKVALARKLATVLHRMWIDGSDFRWGKEITSA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MDYYAGIDVSLELSSVCIVNQDGKIFREVKVASDPEALIGLFGGLGVTLSRIGLEAGPLS
CCCCCCCEEEEEECEEEEECCCCCEEHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
QWLHAGLTAGGYDVVLLETRHVKAGLSAMTVKTDRKDARGIAHLLRMGWFRPVHCKTNSA
HHHHCCCCCCCEEEEEEECCHHHCCCHHEEEECCCHHHHHHHHHHHHCCCCCEECCCCCH
QEIRVLLVGRKLLQSKMGDLEQGIRGLLRGFGLKVGVISKGRFAARIRELVAGQAMLETV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
AEPMLRARDALRAEFTLLHRQILAIVRRDDLCRRLMTVPGVGPLVALTFKSGIDDPSRFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCHHHHC
SSKTVGAHFGLTPKKYQSGETDITGGITRTGDAMVRMALYEAAQVLLTRSQRFSSLKRWA
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVAKRRGMKRAKVALARKLATVLHRMWIDGSDFRWGKEITSA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]