| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is divL [H]
Identifier: 83594772
GI number: 83594772
Start: 3964898
End: 3967303
Strand: Reverse
Name: divL [H]
Synonym: Rru_A3443
Alternate gene names: 83594772
Gene position: 3967303-3964898 (Counterclockwise)
Preceding gene: 83594773
Following gene: 83594771
Centisome position: 91.14
GC content: 68.7
Gene sequence:
>2406_bases ATGTTTTCGGACCCCTCCTTCGCCGATTCCGTTCTGCCGACCCAGATCGGAACCCTCATCGTCCTGGTCGCCGGGACGGT CGCCGTCCTGATGGGCGGGCTGGCCCTGCGCTGGCGCTCGGCTTGGCTGCGCAGCCTGGAGAGCCGCCATCAGGCCGAAT ACGAAGCCGAGGCCCTGCGCGAGATCCTGGCCACCGCCAGCGATGGCTATTACCTGTGGGCGCTTGACGGGCCGTTGCGT GGACGCGAGTTCTGTTCGCGCCGGCTGGCGGTGCTGTTGCGCCTGCCCTCGGGCGTCAATGCCGAGCTGAAGGAAATCAT CGGCGTTTTCGCCGAAGGCGACGCCCAGGCCCTCGAAGGCATGATCGCCGTGCTGCGCCGCGAGGGCCGGGGCTTCGTTC TTGACCTTTTGCTCGCCGCCAGCGGTCGGCGGGTGCGCACCGTCGGCATCCGCGCCAACGCCGGCGACGGCCACGCCCTG GCCGATCTGCTGTGGATGCGCGACGTGACCGAGGAAACCCGGGTTGGCGATGTGCAAGGCCGCCGCGCCCAGGCCCTGCA GGCCGAACGCGACCGCCTGCGCGCCGTGGTCGACGCCCTGCCGGCGCCGATCTGGACCCGCGACGACAGTCTGGCCATTG GCGATGGCAATACGGCGCTGGCCCGGGCCCTTGACCTGGGGTCGGCCGGCGATGCCTTGACGGCGCGCCGCGAACTCGCC CCCGGGGCCACCGGTCAGGAAATGCGCGCCCTGGCGGCGCGTAGCCGGGCGGCCGGACGCCCGGCCCGCGCCCGCTTCCA CGCCGTGCTCGACGGCGAGCGCAAGCTGCTGGAAATCACCGAGACGCCCTTGTCCGAGGGACCCTTGCGCGGTCACACGG TTGGCATCGCCCAGGACATCACGCCGATCGAAGAGGTTGAAAGCCGCCTGGAGCGCGAGACCGAGGCCCATGCCGAGGTG CTTGAGCGCCTGGGCTCGGCCATCGCCATCTTCGGCGGCGATACCCGCTTGTCGTTCCACAACGCCGCCTTCGCCAGCCT GTGGGGGCTCGAGTCCGATTGGCTCAACGGCGAGCCGTCCTATGGCGATTTCCTTGAACGCCAGCGCGAAAACCGCCGCC TGCCCGAGGTCGCCGATTTCCCGGCCTATAAGGCCGGCGAACTGGGCTATTTCACCAAGCTTCTGCGCCCGCGCGAAGAC ATCTTGCACCTGCCCGACGGCGCCACTCTGCGCCGGGTGATCGCCCCCCATCCGCTGGGCGGGCTGATCACCACCTTCGA GGATGTCACCGACAGTCTGGCCCTGGAACGCTCCTACAACCAGCTGACCGCCGTGCAGCGCGAGACCATCGACCACCTGC ACGAGGCGGTCGCCGTCTTTGGCGCCAATGGCCGGCTGCGCCTGTCCAATCCGGCCTTCTCCCAGCTGTGGAGCGGCGCC GGTACCGACAGCGAGCCCCAGGCCGCCGCCCTGCTTGACGACATGGAGGCGGCGATGATCGCCGATGGCGCCTGGGAAAC CTTCCGCCGCCGGCTCTGCGTTCGCGACGAAAGCGCCGGTCCGCGCAACGGCCGGCTGGTGCGCCGCGACGGCCGCCATC TTGATTACGCCACCGTGCCGCTGCCCGATGGCGGGTTGTTGCTGTCGATCCTCGACATCACCGACCGGGTGCGGGTGGAA CAGGCCTTGAGCGAACGCACCGAGGCCCTGCGCGCCGCCGATATGATGAAAAGCGAATTCATCGCCAATGTGTCTTATGA ATTGCGCACGCCGCTGACCACCATCTCGGGCTTTTCCGAGATCCTGTCGGGGGCCTATTACGGCGAGCTCAATACCCGTC AGCGCGAATACGCCGAGGTGATCACCGAAACCTCGCGCCAAGTGGTGCGGTTGATCGACGAGATCACCGATCTGGTCAGC ATGCAGGCCGGCAAGCTGGCCCTGGAACTTGACGCCTTCGACATCCACGCCGCCCTGGCCGCCGTGCTGGCCCTGGGCCG CGAATCGGCGCGGCGCCGGGGCGTCACCTTGAATTTCGACTGCCCGCCCGATGCCGGCTGGATGGTCGCTGACGAAACCC GCATCAAGCAGATCCTCTTCCACCTGATGTCGAACGCCATCACCGGCACCGACGCCGGCGGTCAGGTGACCCTGGCCGTG CAACGCGAGGACACCCCCGACGGCGGCACCATGGTGTTCACCGTCGCCGATACCGGACGCGGCATGGACGAGATCTTGCA AACCCGCGCCTTTGAAAGCTTCGCCAAGGGCCCGCGCGCCGATGGCGCCGGCCTGGGGCTGGCCCTGGTGCGCCGCTTCG TCGAACTCCACGGCGGCGCCGTCGATTTGGTCAGCGTGCCCGGCGAAGGCACCACCGTCACCGTCCGCATCCCCACCTCG GGCTGA
Upstream 100 bases:
>100_bases ATCGGCGGGGCGCCGCGCCCTCGTCCGAAGCCGCTTGCATTTTCCGTAACGCCCGGCCACGCTTCCCGCCCTTTTCCCGC TTCGGCGATGGCCCCTTCCC
Downstream 100 bases:
>100_bases GGGCGGCGGCGTGAAGCGGCGGCGGCCGCCGCCCTCCTTTTAAAAGGGGTCAGATGCGGTAATGGGCCTTGGCCAGGAGT CTAGCCAGGCAAGGTGGCCA
Product: PAS/PAC sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MFSDPSFADSVLPTQIGTLIVLVAGTVAVLMGGLALRWRSAWLRSLESRHQAEYEAEALREILATASDGYYLWALDGPLR GREFCSRRLAVLLRLPSGVNAELKEIIGVFAEGDAQALEGMIAVLRREGRGFVLDLLLAASGRRVRTVGIRANAGDGHAL ADLLWMRDVTEETRVGDVQGRRAQALQAERDRLRAVVDALPAPIWTRDDSLAIGDGNTALARALDLGSAGDALTARRELA PGATGQEMRALAARSRAAGRPARARFHAVLDGERKLLEITETPLSEGPLRGHTVGIAQDITPIEEVESRLERETEAHAEV LERLGSAIAIFGGDTRLSFHNAAFASLWGLESDWLNGEPSYGDFLERQRENRRLPEVADFPAYKAGELGYFTKLLRPRED ILHLPDGATLRRVIAPHPLGGLITTFEDVTDSLALERSYNQLTAVQRETIDHLHEAVAVFGANGRLRLSNPAFSQLWSGA GTDSEPQAAALLDDMEAAMIADGAWETFRRRLCVRDESAGPRNGRLVRRDGRHLDYATVPLPDGGLLLSILDITDRVRVE QALSERTEALRAADMMKSEFIANVSYELRTPLTTISGFSEILSGAYYGELNTRQREYAEVITETSRQVVRLIDEITDLVS MQAGKLALELDAFDIHAALAAVLALGRESARRRGVTLNFDCPPDAGWMVADETRIKQILFHLMSNAITGTDAGGQVTLAV QREDTPDGGTMVFTVADTGRGMDEILQTRAFESFAKGPRADGAGLGLALVRRFVELHGGAVDLVSVPGEGTTVTVRIPTS G
Sequences:
>Translated_801_residues MFSDPSFADSVLPTQIGTLIVLVAGTVAVLMGGLALRWRSAWLRSLESRHQAEYEAEALREILATASDGYYLWALDGPLR GREFCSRRLAVLLRLPSGVNAELKEIIGVFAEGDAQALEGMIAVLRREGRGFVLDLLLAASGRRVRTVGIRANAGDGHAL ADLLWMRDVTEETRVGDVQGRRAQALQAERDRLRAVVDALPAPIWTRDDSLAIGDGNTALARALDLGSAGDALTARRELA PGATGQEMRALAARSRAAGRPARARFHAVLDGERKLLEITETPLSEGPLRGHTVGIAQDITPIEEVESRLERETEAHAEV LERLGSAIAIFGGDTRLSFHNAAFASLWGLESDWLNGEPSYGDFLERQRENRRLPEVADFPAYKAGELGYFTKLLRPRED ILHLPDGATLRRVIAPHPLGGLITTFEDVTDSLALERSYNQLTAVQRETIDHLHEAVAVFGANGRLRLSNPAFSQLWSGA GTDSEPQAAALLDDMEAAMIADGAWETFRRRLCVRDESAGPRNGRLVRRDGRHLDYATVPLPDGGLLLSILDITDRVRVE QALSERTEALRAADMMKSEFIANVSYELRTPLTTISGFSEILSGAYYGELNTRQREYAEVITETSRQVVRLIDEITDLVS MQAGKLALELDAFDIHAALAAVLALGRESARRRGVTLNFDCPPDAGWMVADETRIKQILFHLMSNAITGTDAGGQVTLAV QREDTPDGGTMVFTVADTGRGMDEILQTRAFESFAKGPRADGAGLGLALVRRFVELHGGAVDLVSVPGEGTTVTVRIPTS G >Mature_801_residues MFSDPSFADSVLPTQIGTLIVLVAGTVAVLMGGLALRWRSAWLRSLESRHQAEYEAEALREILATASDGYYLWALDGPLR GREFCSRRLAVLLRLPSGVNAELKEIIGVFAEGDAQALEGMIAVLRREGRGFVLDLLLAASGRRVRTVGIRANAGDGHAL ADLLWMRDVTEETRVGDVQGRRAQALQAERDRLRAVVDALPAPIWTRDDSLAIGDGNTALARALDLGSAGDALTARRELA PGATGQEMRALAARSRAAGRPARARFHAVLDGERKLLEITETPLSEGPLRGHTVGIAQDITPIEEVESRLERETEAHAEV LERLGSAIAIFGGDTRLSFHNAAFASLWGLESDWLNGEPSYGDFLERQRENRRLPEVADFPAYKAGELGYFTKLLRPRED ILHLPDGATLRRVIAPHPLGGLITTFEDVTDSLALERSYNQLTAVQRETIDHLHEAVAVFGANGRLRLSNPAFSQLWSGA GTDSEPQAAALLDDMEAAMIADGAWETFRRRLCVRDESAGPRNGRLVRRDGRHLDYATVPLPDGGLLLSILDITDRVRVE QALSERTEALRAADMMKSEFIANVSYELRTPLTTISGFSEILSGAYYGELNTRQREYAEVITETSRQVVRLIDEITDLVS MQAGKLALELDAFDIHAALAAVLALGRESARRRGVTLNFDCPPDAGWMVADETRIKQILFHLMSNAITGTDAGGQVTLAV QREDTPDGGTMVFTVADTGRGMDEILQTRAFESFAKGPRADGAGLGLALVRRFVELHGGAVDLVSVPGEGTTVTVRIPTS G
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=223, Percent_Identity=31.390134529148, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI48994928, Length=253, Percent_Identity=32.0158102766798, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI145693157, Length=258, Percent_Identity=29.8449612403101, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788713, Length=254, Percent_Identity=29.9212598425197, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=29.6703296703297, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1786600, Length=298, Percent_Identity=28.5234899328859, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=27.4774774774775, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI87081816, Length=241, Percent_Identity=31.1203319502075, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1788549, Length=257, Percent_Identity=25.2918287937743, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=24.5614035087719, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI87082128, Length=243, Percent_Identity=25.1028806584362, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790861, Length=277, Percent_Identity=26.7148014440433, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1790300, Length=268, Percent_Identity=25.7462686567164, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 87112; Mature: 87112
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDPSFADSVLPTQIGTLIVLVAGTVAVLMGGLALRWRSAWLRSLESRHQAEYEAEALR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILATASDGYYLWALDGPLRGREFCSRRLAVLLRLPSGVNAELKEIIGVFAEGDAQALEG HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH MIAVLRREGRGFVLDLLLAASGRRVRTVGIRANAGDGHALADLLWMRDVTEETRVGDVQG HHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC RRAQALQAERDRLRAVVDALPAPIWTRDDSLAIGDGNTALARALDLGSAGDALTARRELA HHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHCC PGATGQEMRALAARSRAAGRPARARFHAVLDGERKLLEITETPLSEGPLRGHTVGIAQDI CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCEEECHHCC TPIEEVESRLERETEAHAEVLERLGSAIAIFGGDTRLSFHNAAFASLWGLESDWLNGEPS CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCC YGDFLERQRENRRLPEVADFPAYKAGELGYFTKLLRPREDILHLPDGATLRRVIAPHPLG HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHEECCCCHHHHHHHCCCCCC GLITTFEDVTDSLALERSYNQLTAVQRETIDHLHEAVAVFGANGRLRLSNPAFSQLWSGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCC GTDSEPQAAALLDDMEAAMIADGAWETFRRRLCVRDESAGPRNGRLVRRDGRHLDYATVP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEC LPDGGLLLSILDITDRVRVEQALSERTEALRAADMMKSEFIANVSYELRTPLTTISGFSE CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH ILSGAYYGELNTRQREYAEVITETSRQVVRLIDEITDLVSMQAGKLALELDAFDIHAALA HHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH AVLALGRESARRRGVTLNFDCPPDAGWMVADETRIKQILFHLMSNAITGTDAGGQVTLAV HHHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEE QREDTPDGGTMVFTVADTGRGMDEILQTRAFESFAKGPRADGAGLGLALVRRFVELHGGA EECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCE VDLVSVPGEGTTVTVRIPTSG EEEEECCCCCCEEEEEECCCC >Mature Secondary Structure MFSDPSFADSVLPTQIGTLIVLVAGTVAVLMGGLALRWRSAWLRSLESRHQAEYEAEALR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILATASDGYYLWALDGPLRGREFCSRRLAVLLRLPSGVNAELKEIIGVFAEGDAQALEG HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH MIAVLRREGRGFVLDLLLAASGRRVRTVGIRANAGDGHALADLLWMRDVTEETRVGDVQG HHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC RRAQALQAERDRLRAVVDALPAPIWTRDDSLAIGDGNTALARALDLGSAGDALTARRELA HHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHCC PGATGQEMRALAARSRAAGRPARARFHAVLDGERKLLEITETPLSEGPLRGHTVGIAQDI CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCCCCCEEECHHCC TPIEEVESRLERETEAHAEVLERLGSAIAIFGGDTRLSFHNAAFASLWGLESDWLNGEPS CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCCC YGDFLERQRENRRLPEVADFPAYKAGELGYFTKLLRPREDILHLPDGATLRRVIAPHPLG HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHEECCCCHHHHHHHCCCCCC GLITTFEDVTDSLALERSYNQLTAVQRETIDHLHEAVAVFGANGRLRLSNPAFSQLWSGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCC GTDSEPQAAALLDDMEAAMIADGAWETFRRRLCVRDESAGPRNGRLVRRDGRHLDYATVP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEC LPDGGLLLSILDITDRVRVEQALSERTEALRAADMMKSEFIANVSYELRTPLTTISGFSE CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH ILSGAYYGELNTRQREYAEVITETSRQVVRLIDEITDLVSMQAGKLALELDAFDIHAALA HHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH AVLALGRESARRRGVTLNFDCPPDAGWMVADETRIKQILFHLMSNAITGTDAGGQVTLAV HHHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEE QREDTPDGGTMVFTVADTGRGMDEILQTRAFESFAKGPRADGAGLGLALVRRFVELHGGA EECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCE VDLVSVPGEGTTVTVRIPTSG EEEEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]