| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594755
Identifier: 83594755
GI number: 83594755
Start: 3943221
End: 3944513
Strand: Direct
Name: 83594755
Synonym: Rru_A3426
Alternate gene names: NA
Gene position: 3943221-3944513 (Clockwise)
Preceding gene: 83594754
Following gene: 83594756
Centisome position: 90.59
GC content: 65.89
Gene sequence:
>1293_bases ATGATCCCGCCCTATCGCGAGCACCCGCTGCGCGAGGTGTTGATTAACGAGTTGCACGCCCGGCCCTCGGAAACCATCGA GGCGCCGGTCCGGCTGAGCCATTTGGCGGTGCTGACGGGCGAGATCACCGATCCCAGCCTGGACCACCTGGGGCTGCTCT GCGCGCGCATGGGCGAAACGGTGCCGGCCAAGGGGGCGACCCGCTTCAACGCCAATCTGGGCGGGCTGGGCCTGCAGTTC GAACGTCATACCGAGTTCTGCACCTATACTTTCCAGCGCCGCGGGCGAACGGGGGATCTGCCCTTCGACCAGCCGGCGCT TGATATGGTGCCACCCGACTGGCTGGCCACCCTGCCCGGTCAGGTGCTGTCGGCGGTGCATCTGGTGGTCGAGCCCAAGG ACACGCCCGAGTATTCGATCGAGGAACTCAGCATTCGCCATTTCGCCGGCAATCCGGTGGTCGGGTCGGCGGTCGGAGGC GGCGCCGCCTTCGCCTATTCCGATCTGCGATTGCACGATGACCGCTGCCTGCGCATGCTGATCCGCGACGTCGATCTCAA TCCCCGTCATGCCGGACGTCTGGTGCAGCGGCTGCTCGAGCTCAACACCTATCGGGCCCTGGCGCTGCTCGCCCTACCGA TGGCCCGGGAATCGAGCCCGGGCCTGCGACGGATCGATATGGTCCTGGCCCATGTAGCGGCGCGGATGGCCGATCCCAAC GGCGTGGATTCCGATGCCGAATTGTTATCGGAGCTGTCCAATCTGACCGCCGAGGTCGAATCCCTGGCGGCGGCCAATTC CTATCGCATCGCCGCCACCCGGGCCTATCACGCCCTGGTCCAGCGCCGGCTGGAGGAATTGCGCGAGGTGCGTCTTGATG GCGTCGTTACCTTCGGCGCCTTCATGGACCGCCGATTGACCCCGGCGATGGCCACGGTGGACTCGGTTTCCGAACGCATC GAGTCGCTGTCCGAACGCGGGGCGCGGGTCGCCAGTCTGCTGCGCGCCCGGGTCGAGGTCGATCTTCAGGCCCAGAACAA GCGCCTGCTTGAAAGCATGAACCGCCGGGCCCGCATCCAGCTGCGTCTGCAAGAGGCGGTTGAAGGGCTGTCGGTGGTGG CCATCAGTTATTATCTGGTCGGGCTTGTCGGCTATATGGCCAAGGGCGTGTCCGGCGCCGGGGTGGAGGTCAAGGAAAGC GTCGTCACCGCCATCGCCGTACCGGTGATCGTCGCCAGCGTCTGGCTGGTGTTGCGCCGGGCCAAACGCGCCATGCTCAA TCGCGCCGATTAA
Upstream 100 bases:
>100_bases CGCCGTGGATGTGTCGAGCGGCGTGGAGACGGTGCGCGGGATCAAGGATCCCGAGCGCGTCAGCGCCTTCGTCAAAGCCG TTCGCGAAGGCTGAAGCGCC
Downstream 100 bases:
>100_bases TCCCTTCAAGGCGGACCGCATAAGATCGCCGCGCCCTTGGCGCCGGCCCGGTGGGGTCGCATAAGATCGCGGCGCTCTTG GCGCCGGCCCGACGGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MIPPYREHPLREVLINELHARPSETIEAPVRLSHLAVLTGEITDPSLDHLGLLCARMGETVPAKGATRFNANLGGLGLQF ERHTEFCTYTFQRRGRTGDLPFDQPALDMVPPDWLATLPGQVLSAVHLVVEPKDTPEYSIEELSIRHFAGNPVVGSAVGG GAAFAYSDLRLHDDRCLRMLIRDVDLNPRHAGRLVQRLLELNTYRALALLALPMARESSPGLRRIDMVLAHVAARMADPN GVDSDAELLSELSNLTAEVESLAAANSYRIAATRAYHALVQRRLEELREVRLDGVVTFGAFMDRRLTPAMATVDSVSERI ESLSERGARVASLLRARVEVDLQAQNKRLLESMNRRARIQLRLQEAVEGLSVVAISYYLVGLVGYMAKGVSGAGVEVKES VVTAIAVPVIVASVWLVLRRAKRAMLNRAD
Sequences:
>Translated_430_residues MIPPYREHPLREVLINELHARPSETIEAPVRLSHLAVLTGEITDPSLDHLGLLCARMGETVPAKGATRFNANLGGLGLQF ERHTEFCTYTFQRRGRTGDLPFDQPALDMVPPDWLATLPGQVLSAVHLVVEPKDTPEYSIEELSIRHFAGNPVVGSAVGG GAAFAYSDLRLHDDRCLRMLIRDVDLNPRHAGRLVQRLLELNTYRALALLALPMARESSPGLRRIDMVLAHVAARMADPN GVDSDAELLSELSNLTAEVESLAAANSYRIAATRAYHALVQRRLEELREVRLDGVVTFGAFMDRRLTPAMATVDSVSERI ESLSERGARVASLLRARVEVDLQAQNKRLLESMNRRARIQLRLQEAVEGLSVVAISYYLVGLVGYMAKGVSGAGVEVKES VVTAIAVPVIVASVWLVLRRAKRAMLNRAD >Mature_430_residues MIPPYREHPLREVLINELHARPSETIEAPVRLSHLAVLTGEITDPSLDHLGLLCARMGETVPAKGATRFNANLGGLGLQF ERHTEFCTYTFQRRGRTGDLPFDQPALDMVPPDWLATLPGQVLSAVHLVVEPKDTPEYSIEELSIRHFAGNPVVGSAVGG GAAFAYSDLRLHDDRCLRMLIRDVDLNPRHAGRLVQRLLELNTYRALALLALPMARESSPGLRRIDMVLAHVAARMADPN GVDSDAELLSELSNLTAEVESLAAANSYRIAATRAYHALVQRRLEELREVRLDGVVTFGAFMDRRLTPAMATVDSVSERI ESLSERGARVASLLRARVEVDLQAQNKRLLESMNRRARIQLRLQEAVEGLSVVAISYYLVGLVGYMAKGVSGAGVEVKES VVTAIAVPVIVASVWLVLRRAKRAMLNRAD
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47320; Mature: 47320
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPYREHPLREVLINELHARPSETIEAPVRLSHLAVLTGEITDPSLDHLGLLCARMGET CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCC VPAKGATRFNANLGGLGLQFERHTEFCTYTFQRRGRTGDLPFDQPALDMVPPDWLATLPG CCCCCCCEECCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHH QVLSAVHLVVEPKDTPEYSIEELSIRHFAGNPVVGSAVGGGAAFAYSDLRLHDDRCLRML HHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEHHCEECHHHHHHHH IRDVDLNPRHAGRLVQRLLELNTYRALALLALPMARESSPGLRRIDMVLAHVAARMADPN HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC GVDSDAELLSELSNLTAEVESLAAANSYRIAATRAYHALVQRRLEELREVRLDGVVTFGA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMDRRLTPAMATVDSVSERIESLSERGARVASLLRARVEVDLQAQNKRLLESMNRRARIQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRLQEAVEGLSVVAISYYLVGLVGYMAKGVSGAGVEVKESVVTAIAVPVIVASVWLVLRR HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRAMLNRAD HHHHHHCCCC >Mature Secondary Structure MIPPYREHPLREVLINELHARPSETIEAPVRLSHLAVLTGEITDPSLDHLGLLCARMGET CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCC VPAKGATRFNANLGGLGLQFERHTEFCTYTFQRRGRTGDLPFDQPALDMVPPDWLATLPG CCCCCCCEECCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCHH QVLSAVHLVVEPKDTPEYSIEELSIRHFAGNPVVGSAVGGGAAFAYSDLRLHDDRCLRML HHHHHHHHEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEHHCEECHHHHHHHH IRDVDLNPRHAGRLVQRLLELNTYRALALLALPMARESSPGLRRIDMVLAHVAARMADPN HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC GVDSDAELLSELSNLTAEVESLAAANSYRIAATRAYHALVQRRLEELREVRLDGVVTFGA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMDRRLTPAMATVDSVSERIESLSERGARVASLLRARVEVDLQAQNKRLLESMNRRARIQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRLQEAVEGLSVVAISYYLVGLVGYMAKGVSGAGVEVKESVVTAIAVPVIVASVWLVLRR HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AKRAMLNRAD HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA