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The map label for this gene is 83594749

Identifier: 83594749

GI number: 83594749

Start: 3937050

End: 3937862

Strand: Reverse

Name: 83594749

Synonym: Rru_A3420

Alternate gene names: NA

Gene position: 3937862-3937050 (Counterclockwise)

Preceding gene: 83594758

Following gene: 83594748

Centisome position: 90.47

GC content: 68.14

Gene sequence:

>813_bases
ATGAAAGATCTCGCGTTGATAAAGCCGTCCAACACCGATCGTCGCGCCGTCAGGGTGATGGCGCGTGCCGCCCGGAAAGC
CACCCTGGCGACGACGATGGCGGGGACGGGCCATCCTTATGCGTCGCTGGTTACCGTTGCCACGGACCATGCCGGCTCGC
CGCTTCTTCTGCTCTCCACCCTGGCCGAGCACACCCGGGGGCTGCTGGCCGATTCGCGCGCCGCGCTGTTCCTTGAGGAT
GGCGAGGGGGAGAGCGATCCCCAAGCCAACCCCCAGGAGGCTGCGCGCGTTACGCTGCTCGGCCGGGTCGAGCGTCATGA
CGACGCCCTGGACCTGGGGCGTTTCCTGGCCCGCCACCCCAAGGCGGCGCGCTATGCCTCGTTTGGTGATTTTGGCCTCT
ATCGCCTGACCATCGAGCGCGCCCAGTACGTGGCCGGTTTTGGCCGGGCGCTGTGGATCGACGAGGGGCTGACGGTTCCG
GTTTCGGCCGCCGCCGCGTTGCGCGCCGAGTCGCCAGCCCTGATCGCCGAGATGAACGCCGATCACGCCGACGCCCTGGC
CCGACTGGCCGAGGCCGCCCTCACCGGTCGGCAAGCCCCCTTGAATCCCACCGACGAACGCCAAGCGAAAGGCTGGCGCC
TCGTCGCCTGCGATACCGACGGCTGCGACCTGCTTAGGGGCGATCAGCCGCTGCGGTTGACCTTTCCCGCCCCGGCGGGC
GATGCGCGAAGTGCAAAAGAGACGCTTTTGCAATGGGATGCCGCGCTGCGTGCCGAGAACGCTCCCAACCCTGGGTTCGG
GGGAAGGGACTAA

Upstream 100 bases:

>100_bases
AGACGGCTCGAAACAAAATTACAAAAACCGTTACAACCGGGGACACCCCCTCGGGTTACCCTACCAACCAGCCGCGTGCA
GGCCTATAGTGGATCGCCTT

Downstream 100 bases:

>100_bases
GAAAAAGGGCGAGCCATGCCGCCCGATGCAAATCCCGCTTACGGGATATTGCTCCAATCGCCGGAGCCCGCTAGGGTTTC
GAAAAATACGACAAATGCTG

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: Pyridoxamine Oxidase Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; FMN Flavoprotein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Related

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKDLALIKPSNTDRRAVRVMARAARKATLATTMAGTGHPYASLVTVATDHAGSPLLLLSTLAEHTRGLLADSRAALFLED
GEGESDPQANPQEAARVTLLGRVERHDDALDLGRFLARHPKAARYASFGDFGLYRLTIERAQYVAGFGRALWIDEGLTVP
VSAAAALRAESPALIAEMNADHADALARLAEAALTGRQAPLNPTDERQAKGWRLVACDTDGCDLLRGDQPLRLTFPAPAG
DARSAKETLLQWDAALRAENAPNPGFGGRD

Sequences:

>Translated_270_residues
MKDLALIKPSNTDRRAVRVMARAARKATLATTMAGTGHPYASLVTVATDHAGSPLLLLSTLAEHTRGLLADSRAALFLED
GEGESDPQANPQEAARVTLLGRVERHDDALDLGRFLARHPKAARYASFGDFGLYRLTIERAQYVAGFGRALWIDEGLTVP
VSAAAALRAESPALIAEMNADHADALARLAEAALTGRQAPLNPTDERQAKGWRLVACDTDGCDLLRGDQPLRLTFPAPAG
DARSAKETLLQWDAALRAENAPNPGFGGRD
>Mature_270_residues
MKDLALIKPSNTDRRAVRVMARAARKATLATTMAGTGHPYASLVTVATDHAGSPLLLLSTLAEHTRGLLADSRAALFLED
GEGESDPQANPQEAARVTLLGRVERHDDALDLGRFLARHPKAARYASFGDFGLYRLTIERAQYVAGFGRALWIDEGLTVP
VSAAAALRAESPALIAEMNADHADALARLAEAALTGRQAPLNPTDERQAKGWRLVACDTDGCDLLRGDQPLRLTFPAPAG
DARSAKETLLQWDAALRAENAPNPGFGGRD

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28837; Mature: 28837

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00116 DNA_POLYMERASE_B

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLALIKPSNTDRRAVRVMARAARKATLATTMAGTGHPYASLVTVATDHAGSPLLLLST
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHH
LAEHTRGLLADSRAALFLEDGEGESDPQANPQEAARVTLLGRVERHDDALDLGRFLARHP
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHEEHEEHHHHHCCCHHHHHHHHHHCC
KAARYASFGDFGLYRLTIERAQYVAGFGRALWIDEGLTVPVSAAAALRAESPALIAEMNA
CHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCC
DHADALARLAEAALTGRQAPLNPTDERQAKGWRLVACDTDGCDLLRGDQPLRLTFPAPAG
CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHCCCCCEEEEECCCCC
DARSAKETLLQWDAALRAENAPNPGFGGRD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKDLALIKPSNTDRRAVRVMARAARKATLATTMAGTGHPYASLVTVATDHAGSPLLLLST
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHH
LAEHTRGLLADSRAALFLEDGEGESDPQANPQEAARVTLLGRVERHDDALDLGRFLARHP
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHEEHEEHHHHHCCCHHHHHHHHHHCC
KAARYASFGDFGLYRLTIERAQYVAGFGRALWIDEGLTVPVSAAAALRAESPALIAEMNA
CHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCC
DHADALARLAEAALTGRQAPLNPTDERQAKGWRLVACDTDGCDLLRGDQPLRLTFPAPAG
CHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHCCCCCEEEEECCCCC
DARSAKETLLQWDAALRAENAPNPGFGGRD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA