| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is pckG [H]
Identifier: 83594748
GI number: 83594748
Start: 3935093
End: 3936955
Strand: Reverse
Name: pckG [H]
Synonym: Rru_A3419
Alternate gene names: 83594748
Gene position: 3936955-3935093 (Counterclockwise)
Preceding gene: 83594749
Following gene: 83594747
Centisome position: 90.45
GC content: 64.84
Gene sequence:
>1863_bases ATGCTGGAGGAAGAGATGAGCGTCAAGCCAACCCGCAACAAGAAACTTCTCGACTGGGTCGAGGACATGACGGCCCTGTG TAAACCCGATCGGGTTTACTGGTGCGATGGATCCCAGGAAGAATACGACCGTCTTTGTCAGGCCATGGTCGATGATGGGA CCTTCATCCGTCTCAACCCCGAGCTGCGCCCCAACAGCTTTCTGGCCCGCTCCGATCCGGCCGACGTCGCCCGGGTCGAA GACCGCACCTTCATTTGCGCCGCCACCGCCGACGAGGCCGGCCCGACCAACAACTGGATGGCGCCCGACGAGATGCGCGC CAAGCTGGCCGGGTTGTTCGACGGCTGCATGAAGGGCCGCACCCTTTACGTCATCCCCTTCTCGATGGGCCCGCTGGGCA GCCATATCGCCCAGATCGGCGTCGAGATCTCCGACAGCCCCTATGTCGCGGCCAATATGCGCATCATGACGCGCATGGGC TCGAAGGTGCTTGACGTTCTGGGCGAGGACGGCGATTTCGTGCCGGCCATGCATTCCGTCGGCAAGCCTTTGGCCCCGGG CGAGGTCGACAAGGGCTGGCCCTGCAATCCCGAGAACCGCTACATCGTCCACTTCCCCGACACCCGGGAAATCTGGTCCT TCGGCTCCGGGTACGGCGGCAACGCCCTGCTGGGCAAGAAGTGCTTCGCGCTGCGCATCGCCTCGGTGATGGCGCGCGAC GAAGGCTGGCTGGCCGAACACATGCTGATCCTTGGCGTGAAAAGCCCGACGGGCGAGAAGCGCTATGTCGGCGGCGCCTT CCCCAGCGCCTGCGGCAAGACCAACTTCGCCATGCTGATTCCGCCCGAGGCCTATAAGGGTTGGGAAGTCACCACCATCG GCGACGATATCGCCTGGATCAAGCCGGGCGCCGACGGGCGGCTTTACGCCATCAATCCCGAGGCCGGCTATTTCGGCGTG GCGCCGGGCACCGGGGTTCATACCAACCCCAACGCCATGATCGCCTGCGCCAAGAACTCGATCTTCACCAATGTCGCGCT GACCGATGACGGCGACGTGTGGTGGGAAGGCATGACCGAGAAAAAGCCGGCCCATGCCATCGACTGGAAGGGCCAGGACT GGACCCCCGATTGCGGCCGCCCCGCCGCCCATCCCAACGCCCGCTTCACCGCTCCGGCCAATCAGGCGCCCTCGATCGAC CCCGATTGGGAGAACCCCGACGGCGTGCCGATCAGCGCCTTCATCTTCGGCGGCCGGGTGGCGACCAACTTCCCGCTGGC CTTCCAAAGCTTTGACTGGACCCACGGCGTTTACCTCGCCGCCACCATGGGCTCGGAAGCCACCGCCGCCGCCGATGGCC AGTCGGGCATCCGCCGCGATCCGATGGCGATGCTGCCGTTCTGCGGCTACAACATGGCCGACTACTGGCAGCATTGGCTC GACATGGAAGACAAGGTCGGCGCCGACAAGCTGCCGCGCATCTTCCGCGTGAACTGGTTCCGCAAGGACGAGAACGGCAA GTTCATCTGGCCGGGCTTTGGCGAGAACATGCGCGCCCTGGAATGGATCATCGGTCGTTGCGAAGGGACGGCGGGCGCGG TGGAAAGCCCGATCGGCTTCGTGCCGCGCCGCGAGGATCTGCGGTGGGACGGCATCGTCGGCTTCGATGTCAGTCGCTTC TATCAGATCATGGCCATCCACAAGGATGTCGCCCGCAAGGAAGCCGAGACCCAGGACGTGTTCTTCGCCAAGTTCGGTGA TCGCATGCCCAAGGCTCTGCTCGACCAGCGGACCGCCCTGCTCAAGCGCCTGGAAGACGCTCCCGAGGTGTGGGACCTGC CCCGCGCCGAGGCCGCCCAGTAA
Upstream 100 bases:
>100_bases GACTAAGAAAAAGGGCGAGCCATGCCGCCCGATGCAAATCCCGCTTACGGGATATTGCTCCAATCGCCGGAGCCCGCTAG GGTTTCGAAAAATACGACAA
Downstream 100 bases:
>100_bases CACGGGCCCTTTCTCTCTTCCTTCATCGCCTGCCGGCCGGCTCCCCCAAGGAGCCGGCCTTTTCTTTGACCGGAAGCTGG GCTGGGGGTGGCGCGCCCCC
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MLEEEMSVKPTRNKKLLDWVEDMTALCKPDRVYWCDGSQEEYDRLCQAMVDDGTFIRLNPELRPNSFLARSDPADVARVE DRTFICAATADEAGPTNNWMAPDEMRAKLAGLFDGCMKGRTLYVIPFSMGPLGSHIAQIGVEISDSPYVAANMRIMTRMG SKVLDVLGEDGDFVPAMHSVGKPLAPGEVDKGWPCNPENRYIVHFPDTREIWSFGSGYGGNALLGKKCFALRIASVMARD EGWLAEHMLILGVKSPTGEKRYVGGAFPSACGKTNFAMLIPPEAYKGWEVTTIGDDIAWIKPGADGRLYAINPEAGYFGV APGTGVHTNPNAMIACAKNSIFTNVALTDDGDVWWEGMTEKKPAHAIDWKGQDWTPDCGRPAAHPNARFTAPANQAPSID PDWENPDGVPISAFIFGGRVATNFPLAFQSFDWTHGVYLAATMGSEATAAADGQSGIRRDPMAMLPFCGYNMADYWQHWL DMEDKVGADKLPRIFRVNWFRKDENGKFIWPGFGENMRALEWIIGRCEGTAGAVESPIGFVPRREDLRWDGIVGFDVSRF YQIMAIHKDVARKEAETQDVFFAKFGDRMPKALLDQRTALLKRLEDAPEVWDLPRAEAAQ
Sequences:
>Translated_620_residues MLEEEMSVKPTRNKKLLDWVEDMTALCKPDRVYWCDGSQEEYDRLCQAMVDDGTFIRLNPELRPNSFLARSDPADVARVE DRTFICAATADEAGPTNNWMAPDEMRAKLAGLFDGCMKGRTLYVIPFSMGPLGSHIAQIGVEISDSPYVAANMRIMTRMG SKVLDVLGEDGDFVPAMHSVGKPLAPGEVDKGWPCNPENRYIVHFPDTREIWSFGSGYGGNALLGKKCFALRIASVMARD EGWLAEHMLILGVKSPTGEKRYVGGAFPSACGKTNFAMLIPPEAYKGWEVTTIGDDIAWIKPGADGRLYAINPEAGYFGV APGTGVHTNPNAMIACAKNSIFTNVALTDDGDVWWEGMTEKKPAHAIDWKGQDWTPDCGRPAAHPNARFTAPANQAPSID PDWENPDGVPISAFIFGGRVATNFPLAFQSFDWTHGVYLAATMGSEATAAADGQSGIRRDPMAMLPFCGYNMADYWQHWL DMEDKVGADKLPRIFRVNWFRKDENGKFIWPGFGENMRALEWIIGRCEGTAGAVESPIGFVPRREDLRWDGIVGFDVSRF YQIMAIHKDVARKEAETQDVFFAKFGDRMPKALLDQRTALLKRLEDAPEVWDLPRAEAAQ >Mature_620_residues MLEEEMSVKPTRNKKLLDWVEDMTALCKPDRVYWCDGSQEEYDRLCQAMVDDGTFIRLNPELRPNSFLARSDPADVARVE DRTFICAATADEAGPTNNWMAPDEMRAKLAGLFDGCMKGRTLYVIPFSMGPLGSHIAQIGVEISDSPYVAANMRIMTRMG SKVLDVLGEDGDFVPAMHSVGKPLAPGEVDKGWPCNPENRYIVHFPDTREIWSFGSGYGGNALLGKKCFALRIASVMARD EGWLAEHMLILGVKSPTGEKRYVGGAFPSACGKTNFAMLIPPEAYKGWEVTTIGDDIAWIKPGADGRLYAINPEAGYFGV APGTGVHTNPNAMIACAKNSIFTNVALTDDGDVWWEGMTEKKPAHAIDWKGQDWTPDCGRPAAHPNARFTAPANQAPSID PDWENPDGVPISAFIFGGRVATNFPLAFQSFDWTHGVYLAATMGSEATAAADGQSGIRRDPMAMLPFCGYNMADYWQHWL DMEDKVGADKLPRIFRVNWFRKDENGKFIWPGFGENMRALEWIIGRCEGTAGAVESPIGFVPRREDLRWDGIVGFDVSRF YQIMAIHKDVARKEAETQDVFFAKFGDRMPKALLDQRTALLKRLEDAPEVWDLPRAEAAQ
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=604, Percent_Identity=51.158940397351, Blast_Score=599, Evalue=1e-171, Organism=Homo sapiens, GI187281517, Length=600, Percent_Identity=49.8333333333333, Blast_Score=590, Evalue=1e-168, Organism=Homo sapiens, GI66346723, Length=375, Percent_Identity=54.4, Blast_Score=394, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17555492, Length=617, Percent_Identity=47.6499189627229, Blast_Score=559, Evalue=1e-159, Organism=Caenorhabditis elegans, GI71989645, Length=612, Percent_Identity=48.0392156862745, Blast_Score=557, Evalue=1e-159, Organism=Caenorhabditis elegans, GI71989658, Length=612, Percent_Identity=48.0392156862745, Blast_Score=556, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989653, Length=599, Percent_Identity=48.7479131886477, Blast_Score=552, Evalue=1e-157, Organism=Caenorhabditis elegans, GI32564411, Length=557, Percent_Identity=49.7307001795332, Blast_Score=536, Evalue=1e-152, Organism=Caenorhabditis elegans, GI32564407, Length=525, Percent_Identity=50.0952380952381, Blast_Score=513, Evalue=1e-145, Organism=Caenorhabditis elegans, GI71989649, Length=485, Percent_Identity=51.1340206185567, Blast_Score=483, Evalue=1e-136, Organism=Caenorhabditis elegans, GI32564409, Length=371, Percent_Identity=46.3611859838275, Blast_Score=327, Evalue=8e-90, Organism=Caenorhabditis elegans, GI17540956, Length=483, Percent_Identity=25.0517598343685, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24655085, Length=602, Percent_Identity=51.1627906976744, Blast_Score=595, Evalue=1e-170, Organism=Drosophila melanogaster, GI24655082, Length=603, Percent_Identity=49.4195688225539, Blast_Score=580, Evalue=1e-165, Organism=Drosophila melanogaster, GI161077226, Length=572, Percent_Identity=50, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI24655088, Length=507, Percent_Identity=52.6627218934911, Blast_Score=520, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68751; Mature: 68751
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEEMSVKPTRNKKLLDWVEDMTALCKPDRVYWCDGSQEEYDRLCQAMVDDGTFIRLNP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECC ELRPNSFLARSDPADVARVEDRTFICAATADEAGPTNNWMAPDEMRAKLAGLFDGCMKGR CCCCCCEECCCCCCHHEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TLYVIPFSMGPLGSHIAQIGVEISDSPYVAANMRIMTRMGSKVLDVLGEDGDFVPAMHSV EEEEEEECCCCHHHHHHHHCCEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHC GKPLAPGEVDKGWPCNPENRYIVHFPDTREIWSFGSGYGGNALLGKKCFALRIASVMARD CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC EGWLAEHMLILGVKSPTGEKRYVGGAFPSACGKTNFAMLIPPEAYKGWEVTTIGDDIAWI CCHHEEEEEEEEECCCCCCCCEECCCCCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEE KPGADGRLYAINPEAGYFGVAPGTGVHTNPNAMIACAKNSIFTNVALTDDGDVWWEGMTE CCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEECCCCC KKPAHAIDWKGQDWTPDCGRPAAHPNARFTAPANQAPSIDPDWENPDGVPISAFIFGGRV CCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCEE ATNFPLAFQSFDWTHGVYLAATMGSEATAAADGQSGIRRDPMAMLPFCGYNMADYWQHWL ECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC DMEDKVGADKLPRIFRVNWFRKDENGKFIWPGFGENMRALEWIIGRCEGTAGAVESPIGF CCCCCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC VPRREDLRWDGIVGFDVSRFYQIMAIHKDVARKEAETQDVFFAKFGDRMPKALLDQRTAL CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH LKRLEDAPEVWDLPRAEAAQ HHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure MLEEEMSVKPTRNKKLLDWVEDMTALCKPDRVYWCDGSQEEYDRLCQAMVDDGTFIRLNP CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECC ELRPNSFLARSDPADVARVEDRTFICAATADEAGPTNNWMAPDEMRAKLAGLFDGCMKGR CCCCCCEECCCCCCHHEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC TLYVIPFSMGPLGSHIAQIGVEISDSPYVAANMRIMTRMGSKVLDVLGEDGDFVPAMHSV EEEEEEECCCCHHHHHHHHCCEECCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHC GKPLAPGEVDKGWPCNPENRYIVHFPDTREIWSFGSGYGGNALLGKKCFALRIASVMARD CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC EGWLAEHMLILGVKSPTGEKRYVGGAFPSACGKTNFAMLIPPEAYKGWEVTTIGDDIAWI CCHHEEEEEEEEECCCCCCCCEECCCCCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEE KPGADGRLYAINPEAGYFGVAPGTGVHTNPNAMIACAKNSIFTNVALTDDGDVWWEGMTE CCCCCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEECCCCC KKPAHAIDWKGQDWTPDCGRPAAHPNARFTAPANQAPSIDPDWENPDGVPISAFIFGGRV CCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCEE ATNFPLAFQSFDWTHGVYLAATMGSEATAAADGQSGIRRDPMAMLPFCGYNMADYWQHWL ECCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC DMEDKVGADKLPRIFRVNWFRKDENGKFIWPGFGENMRALEWIIGRCEGTAGAVESPIGF CCCCCCCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC VPRREDLRWDGIVGFDVSRFYQIMAIHKDVARKEAETQDVFFAKFGDRMPKALLDQRTAL CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH LKRLEDAPEVWDLPRAEAAQ HHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA