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The map label for this gene is yfbS [C]

Identifier: 83594733

GI number: 83594733

Start: 3919926

End: 3921680

Strand: Direct

Name: yfbS [C]

Synonym: Rru_A3404

Alternate gene names: 83594733

Gene position: 3919926-3921680 (Clockwise)

Preceding gene: 83594732

Following gene: 83594734

Centisome position: 90.05

GC content: 71.28

Gene sequence:

>1755_bases
ATGAGCCTCGATCAGCTTGCGCTTCTCGCCCTGATGGCGACCACCCTGGTCGTGCTGGCCAGCGATCGCCTGCGCTATGA
TGTGGTGGCGGTCGGCGCGCTGCTGGGCGCGGTGGGTCTGGGGCTGGTGCCGATCGAGCACGCCTTCGCCGGCTTCGCCA
GCCCGGTGGTGGTCACCGTCGCCGCCTTGCTGGTGATCGGCAGAACCCTGGTGGCCCTTGGCCTGCTGGAGGGGTTGGCC
CGCCGTCTGGCCGATGGCGGGCGCACGCCTTTGGGACTGATCGTGCCGCTCTGCGGACTTGGCGCCCTGGCCGGAGCCTG
CCTATCGAGCTTTGGCGCCCTGGCCCTGATGATGCCGGTCGCCCTGGTCGCCGGCACAAGGCGGGGGATCGCCGCCTCGC
GCCTATTGCTTCCCCTCTCGTTCTCCACCCTGCTGGGCGGCATGACGACGCTGATCGGCTCGCCGGTCAATCTGCTGATC
GCCCAGGCCCGCCAGGACGCCCTGGGGCGGCCCTTCGCCCTGTTCGATTTCGCCGCCGCCGGCCTGCCGGTAGCGGTGGC
CGGGCTGCTTTGGCTGGGGCTGGCCAGCTGGCGGCTGCTGCCCGAACGCGGACCGGCGACCACGGCGAGCGGCCTGCCCG
AGGGGCTGGAGGTCGGTCCCTATCAGACCGAGGGCCGGGTTGGTGGCGACTCGCCGTTAATCGGCCTGCGGGTGCCGGCT
TTCGAGCGAAGCCGGGCGGTGCGCGTTCATGGGGTGATCCGCGGCGGTCTGCGGGTCTTCGCCCGTCCCGCCGATATCGA
TCTGCGGGCCGGCGATGTCTTGCTGCTGGAAGCCGCCCTGCCGGTTCTCCAAGCCCTGGCGGCGCGCGAGGGCATCCGCC
CGGCCCTGCCCGAGGCGCGGGGCGGCGAGGAGATCCTGGAAGCGGTCATCACCCCGGCTTCGATCGCTCTGGGCAGTTGT
CCGCTGACCCTTGACGCCCCGGGGCGCTGGCGGGTCGAGATCATGGCGGTGGCGCGCAATGGCCGGCGCTTCGAAGGCGG
GCTGGGCGAGTTGAGCCTGATGGTCGGCGATCTGCTGCTGCTGCGCGGCCGCCCCGATCACCTGCAAGAGGCGCTGGCCG
CCCTGGACTGCCTGCCTTTGCGCGATCGCGGCATCCGTTTGGCCGGGCGCGGCGGCGCGGTACCGCTGGTGCTGTTCGCC
CTGGCGCTAGCCTTGGCCGTGCTCGGGCTGGTTCCCCCACCGGTCGCCTTCGTCGCCGCCCTCTTTGGCATGGTGGTCAG
CGGCGCCTTGCCGCTCAGCGAGGTTTACCGGCGGATCGATTGGCCGGTGGTGGTTTTCCTCGCCGCCTTGATCCCGATCG
GCGACGCCCTGGCCGAGAGCGGCGCGGCGGCCGGGCTGGCCGGCGGCGTGCTGAAACTGGCCGGCGATATCGGGCCCCAT
GCCCTGCTGGCGATGACCCTGGCGGCGGCGATGGGACTGTCGCCACTGCTGGGCGGGGTGGCAACGACGCTGATGCTGGC
GCCGGTGGTGCTAAGCTTGGCCGCCCAGGCCTCGGTCTCGGCCGATCCCTTCCTGATCGCCGTGGCCATCGGCGCCTCGG
CCGATTTTTTCACGCCCTTTGGCCATCACAACAACGCCCTGATCCTCGGGCCGGGCGGCTATCGCTTTCTCGATTACGGT
CGGGCCGGATTGCCGCTGGCGCTGATCGTTCTTGGCGTCGCCCTGGCGGTGATCCCCCAGGTCTGGCCCTTCTGA

Upstream 100 bases:

>100_bases
CTGGCGGGCCTGGAAAACGGGAAGCCCGGTTGCCCTGGTGCCCGCCCGCTTCGATCTGTTTCCCCGGTAACCGGCGCCGC
GCCGGCCGGGGACGGGGGGA

Downstream 100 bases:

>100_bases
GCCGAGCGGCGGAGGGCGCGAAGGGTTTTCATCGGCGTCCTCGCATGCCATATGCGGGGTCTGACCTGTGTTTCCCCTCC
CCCTTTCCCCCAAGAGGTCC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSLDQLALLALMATTLVVLASDRLRYDVVAVGALLGAVGLGLVPIEHAFAGFASPVVVTVAALLVIGRTLVALGLLEGLA
RRLADGGRTPLGLIVPLCGLGALAGACLSSFGALALMMPVALVAGTRRGIAASRLLLPLSFSTLLGGMTTLIGSPVNLLI
AQARQDALGRPFALFDFAAAGLPVAVAGLLWLGLASWRLLPERGPATTASGLPEGLEVGPYQTEGRVGGDSPLIGLRVPA
FERSRAVRVHGVIRGGLRVFARPADIDLRAGDVLLLEAALPVLQALAAREGIRPALPEARGGEEILEAVITPASIALGSC
PLTLDAPGRWRVEIMAVARNGRRFEGGLGELSLMVGDLLLLRGRPDHLQEALAALDCLPLRDRGIRLAGRGGAVPLVLFA
LALALAVLGLVPPPVAFVAALFGMVVSGALPLSEVYRRIDWPVVVFLAALIPIGDALAESGAAAGLAGGVLKLAGDIGPH
ALLAMTLAAAMGLSPLLGGVATTLMLAPVVLSLAAQASVSADPFLIAVAIGASADFFTPFGHHNNALILGPGGYRFLDYG
RAGLPLALIVLGVALAVIPQVWPF

Sequences:

>Translated_584_residues
MSLDQLALLALMATTLVVLASDRLRYDVVAVGALLGAVGLGLVPIEHAFAGFASPVVVTVAALLVIGRTLVALGLLEGLA
RRLADGGRTPLGLIVPLCGLGALAGACLSSFGALALMMPVALVAGTRRGIAASRLLLPLSFSTLLGGMTTLIGSPVNLLI
AQARQDALGRPFALFDFAAAGLPVAVAGLLWLGLASWRLLPERGPATTASGLPEGLEVGPYQTEGRVGGDSPLIGLRVPA
FERSRAVRVHGVIRGGLRVFARPADIDLRAGDVLLLEAALPVLQALAAREGIRPALPEARGGEEILEAVITPASIALGSC
PLTLDAPGRWRVEIMAVARNGRRFEGGLGELSLMVGDLLLLRGRPDHLQEALAALDCLPLRDRGIRLAGRGGAVPLVLFA
LALALAVLGLVPPPVAFVAALFGMVVSGALPLSEVYRRIDWPVVVFLAALIPIGDALAESGAAAGLAGGVLKLAGDIGPH
ALLAMTLAAAMGLSPLLGGVATTLMLAPVVLSLAAQASVSADPFLIAVAIGASADFFTPFGHHNNALILGPGGYRFLDYG
RAGLPLALIVLGVALAVIPQVWPF
>Mature_583_residues
SLDQLALLALMATTLVVLASDRLRYDVVAVGALLGAVGLGLVPIEHAFAGFASPVVVTVAALLVIGRTLVALGLLEGLAR
RLADGGRTPLGLIVPLCGLGALAGACLSSFGALALMMPVALVAGTRRGIAASRLLLPLSFSTLLGGMTTLIGSPVNLLIA
QARQDALGRPFALFDFAAAGLPVAVAGLLWLGLASWRLLPERGPATTASGLPEGLEVGPYQTEGRVGGDSPLIGLRVPAF
ERSRAVRVHGVIRGGLRVFARPADIDLRAGDVLLLEAALPVLQALAAREGIRPALPEARGGEEILEAVITPASIALGSCP
LTLDAPGRWRVEIMAVARNGRRFEGGLGELSLMVGDLLLLRGRPDHLQEALAALDCLPLRDRGIRLAGRGGAVPLVLFAL
ALALAVLGLVPPPVAFVAALFGMVVSGALPLSEVYRRIDWPVVVFLAALIPIGDALAESGAAAGLAGGVLKLAGDIGPHA
LLAMTLAAAMGLSPLLGGVATTLMLAPVVLSLAAQASVSADPFLIAVAIGASADFFTPFGHHNNALILGPGGYRFLDYGR
AGLPLALIVLGVALAVIPQVWPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=619, Percent_Identity=29.2407108239095, Blast_Score=195, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 59584; Mature: 59452

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDQLALLALMATTLVVLASDRLRYDVVAVGALLGAVGLGLVPIEHAFAGFASPVVVTV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
AALLVIGRTLVALGLLEGLARRLADGGRTPLGLIVPLCGLGALAGACLSSFGALALMMPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVAGTRRGIAASRLLLPLSFSTLLGGMTTLIGSPVNLLIAQARQDALGRPFALFDFAAA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHC
GLPVAVAGLLWLGLASWRLLPERGPATTASGLPEGLEVGPYQTEGRVGGDSPLIGLRVPA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
FERSRAVRVHGVIRGGLRVFARPADIDLRAGDVLLLEAALPVLQALAAREGIRPALPEAR
HHCCCCEEEHHHHHCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGEEILEAVITPASIALGSCPLTLDAPGRWRVEIMAVARNGRRFEGGLGELSLMVGDLLL
CHHHHHHHHHCCHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH
LRGRPDHLQEALAALDCLPLRDRGIRLAGRGGAVPLVLFALALALAVLGLVPPPVAFVAA
HCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LFGMVVSGALPLSEVYRRIDWPVVVFLAALIPIGDALAESGAAAGLAGGVLKLAGDIGPH
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHH
ALLAMTLAAAMGLSPLLGGVATTLMLAPVVLSLAAQASVSADPFLIAVAIGASADFFTPF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
GHHNNALILGPGGYRFLDYGRAGLPLALIVLGVALAVIPQVWPF
CCCCCEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLDQLALLALMATTLVVLASDRLRYDVVAVGALLGAVGLGLVPIEHAFAGFASPVVVTV
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHH
AALLVIGRTLVALGLLEGLARRLADGGRTPLGLIVPLCGLGALAGACLSSFGALALMMPV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVAGTRRGIAASRLLLPLSFSTLLGGMTTLIGSPVNLLIAQARQDALGRPFALFDFAAA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHC
GLPVAVAGLLWLGLASWRLLPERGPATTASGLPEGLEVGPYQTEGRVGGDSPLIGLRVPA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
FERSRAVRVHGVIRGGLRVFARPADIDLRAGDVLLLEAALPVLQALAAREGIRPALPEAR
HHCCCCEEEHHHHHCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGEEILEAVITPASIALGSCPLTLDAPGRWRVEIMAVARNGRRFEGGLGELSLMVGDLLL
CHHHHHHHHHCCHHHHHCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH
LRGRPDHLQEALAALDCLPLRDRGIRLAGRGGAVPLVLFALALALAVLGLVPPPVAFVAA
HCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LFGMVVSGALPLSEVYRRIDWPVVVFLAALIPIGDALAESGAAAGLAGGVLKLAGDIGPH
HHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHH
ALLAMTLAAAMGLSPLLGGVATTLMLAPVVLSLAAQASVSADPFLIAVAIGASADFFTPF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
GHHNNALILGPGGYRFLDYGRAGLPLALIVLGVALAVIPQVWPF
CCCCCEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]