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The map label for this gene is 83594727

Identifier: 83594727

GI number: 83594727

Start: 3914498

End: 3915040

Strand: Reverse

Name: 83594727

Synonym: Rru_A3398

Alternate gene names: NA

Gene position: 3915040-3914498 (Counterclockwise)

Preceding gene: 83594737

Following gene: 83594723

Centisome position: 89.94

GC content: 64.09

Gene sequence:

>543_bases
ATGCGTAAAGGCAAGCAAGCGGACGTGCGGCCCTACTCCAGCGACAACCCCGACCCCCTCGACAAGGAAGTCGGGCGGCG
GTTGCGACTGCGCCGTAAGCTTCTCGGGTTGAGCCAGCAGCAGTTGGCCGATGCGGTCGGCATCACGTTTCAGCAGGTGC
AGAAGTACGAGCGCGGCGTCAACCGCCTGAGTTCCAGCCGTCTGTGGGATTTCGCGACGATTCTTGGCGTCAGCGTCTCG
TTCTTCTTCGAAGATCTGGAAGCCGCCGATGTCGATCGGACGATTCCGCGCGCCCGCCGCGACGCCCAGGATGAAACGAT
CACCCAGACCACCGCCGAAGATCCGCTGGTCCGCACCGAAACCCTGGAACTGTGTTACGCCTTCTGGGCGACGACGCCGC
GAGTGCGCAAGCGCTATCTTGATTTCCTGAAGACCGCCGCCACCCTGGAAAAGCCCCTCTACGAAGCCCCCGAGGGCACC
CAGGTTCCCACGCCCCAGGAAATCGCGGCCGAGCGCGTCATTCTTCCCGGCGCCGCGACCTGA

Upstream 100 bases:

>100_bases
GAAGGTATTTCAATTACTTATTGGCTAGACACGGGGATGGATTTGGAGTCAAATTGTCGTTCAAAGTGAAATCCTGCTGT
TTTTATTACGGGAACGAACC

Downstream 100 bases:

>100_bases
TTCTTTCGCCGGCGGCGTCGACGTTGTGTAAGGCCCGACCTCTTGCGAGGCCGGGCCTTTTCTTTACCCGATAATCCGGG
ACCCGCCCGCCGATGGCCTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRKGKQADVRPYSSDNPDPLDKEVGRRLRLRRKLLGLSQQQLADAVGITFQQVQKYERGVNRLSSSRLWDFATILGVSVS
FFFEDLEAADVDRTIPRARRDAQDETITQTTAEDPLVRTETLELCYAFWATTPRVRKRYLDFLKTAATLEKPLYEAPEGT
QVPTPQEIAAERVILPGAAT

Sequences:

>Translated_180_residues
MRKGKQADVRPYSSDNPDPLDKEVGRRLRLRRKLLGLSQQQLADAVGITFQQVQKYERGVNRLSSSRLWDFATILGVSVS
FFFEDLEAADVDRTIPRARRDAQDETITQTTAEDPLVRTETLELCYAFWATTPRVRKRYLDFLKTAATLEKPLYEAPEGT
QVPTPQEIAAERVILPGAAT
>Mature_180_residues
MRKGKQADVRPYSSDNPDPLDKEVGRRLRLRRKLLGLSQQQLADAVGITFQQVQKYERGVNRLSSSRLWDFATILGVSVS
FFFEDLEAADVDRTIPRARRDAQDETITQTTAEDPLVRTETLELCYAFWATTPRVRKRYLDFLKTAATLEKPLYEAPEGT
QVPTPQEIAAERVILPGAAT

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20413; Mature: 20413

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGKQADVRPYSSDNPDPLDKEVGRRLRLRRKLLGLSQQQLADAVGITFQQVQKYERGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NRLSSSRLWDFATILGVSVSFFFEDLEAADVDRTIPRARRDAQDETITQTTAEDPLVRTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
TLELCYAFWATTPRVRKRYLDFLKTAATLEKPLYEAPEGTQVPTPQEIAAERVILPGAAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKGKQADVRPYSSDNPDPLDKEVGRRLRLRRKLLGLSQQQLADAVGITFQQVQKYERGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NRLSSSRLWDFATILGVSVSFFFEDLEAADVDRTIPRARRDAQDETITQTTAEDPLVRTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
TLELCYAFWATTPRVRKRYLDFLKTAATLEKPLYEAPEGTQVPTPQEIAAERVILPGAAT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]