| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594721
Identifier: 83594721
GI number: 83594721
Start: 3909794
End: 3910165
Strand: Reverse
Name: 83594721
Synonym: Rru_A3392
Alternate gene names: NA
Gene position: 3910165-3909794 (Counterclockwise)
Preceding gene: 83594723
Following gene: 83594720
Centisome position: 89.83
GC content: 63.17
Gene sequence:
>372_bases ATGAGGGCGACGGTCCCCTTGAAGCGCCTGCCGCTTGTCTCTATCCTGTGGGTTCAAGGAGTTTGGCGTGCTTCCTGGAT TAAGGAGATTCTTGCGCGCCGGGGTCCAAGGAGTAGGGAAAGTGCCGGAAGAGAGCCTCCGGCGCAAGAGGCGCCGAAGG CCGAAAGGGTTTGCCCCATGAGACTACCCCCCTTGCCCGAAGATCTTCGGGTCCGGCTGGATGCCCTGGCCAAAAGGGCA GGAAAGTCCACCGAGGACTGCGTCGCCCAGGCGATCGCCGAATATGTCGAGAATTGGGAGGCCTATCACCGGGCGGTGGA TGCGCTGCGCGAGGACGAACCCCGGCCGATTCTGACGGAGGCGCCCCTGTGA
Upstream 100 bases:
>100_bases GGAGGGGGCGGAGGCCTCGAAAACGGGCGCCATGCGGTCTGTTTGGGGTCTGCGAGCCATGCCGATTCTTGGCGGAAACC GTCGTTGGGGGGGGACGTCG
Downstream 100 bases:
>100_bases TCATCGCCCGCCGATCGGGCGAGACCGGTAATTTCCGCCGATCGGGCGAGACCGATAGACCGCTGAGAGCCGGTGTGCGG TGAGCCCTCCTCGGCTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRATVPLKRLPLVSILWVQGVWRASWIKEILARRGPRSRESAGREPPAQEAPKAERVCPMRLPPLPEDLRVRLDALAKRA GKSTEDCVAQAIAEYVENWEAYHRAVDALREDEPRPILTEAPL
Sequences:
>Translated_123_residues MRATVPLKRLPLVSILWVQGVWRASWIKEILARRGPRSRESAGREPPAQEAPKAERVCPMRLPPLPEDLRVRLDALAKRA GKSTEDCVAQAIAEYVENWEAYHRAVDALREDEPRPILTEAPL >Mature_123_residues MRATVPLKRLPLVSILWVQGVWRASWIKEILARRGPRSRESAGREPPAQEAPKAERVCPMRLPPLPEDLRVRLDALAKRA GKSTEDCVAQAIAEYVENWEAYHRAVDALREDEPRPILTEAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13954; Mature: 13954
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATVPLKRLPLVSILWVQGVWRASWIKEILARRGPRSRESAGREPPAQEAPKAERVCPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC RLPPLPEDLRVRLDALAKRAGKSTEDCVAQAIAEYVENWEAYHRAVDALREDEPRPILTE CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC APL CCC >Mature Secondary Structure MRATVPLKRLPLVSILWVQGVWRASWIKEILARRGPRSRESAGREPPAQEAPKAERVCPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCC RLPPLPEDLRVRLDALAKRAGKSTEDCVAQAIAEYVENWEAYHRAVDALREDEPRPILTE CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC APL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA