| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594718
Identifier: 83594718
GI number: 83594718
Start: 3905963
End: 3907000
Strand: Reverse
Name: 83594718
Synonym: Rru_A3389
Alternate gene names: NA
Gene position: 3907000-3905963 (Counterclockwise)
Preceding gene: 83594719
Following gene: 83594711
Centisome position: 89.76
GC content: 62.24
Gene sequence:
>1038_bases ATGCTGAGTCGCACCGCCGACAATCTTTACTGGATGACCCGTTACGTCGAACGGGCCGAGAACATGGCGCGCATCCTGGA TGTGTCCTATCGGATGAGCCAGCTTCCGCGCAATGGCACGGATGCGGCGGTGGAATGGGAACCCGCCCTGATCATCTCGG GCCAGAAACCCGATTTCGAGACGCGCTTCGAGGAGATCACGGCGGGCAATGTCATCGCCTATATGGCGCTCGATCCCGAA AACCCGTCGAGCATCGTCTCCACCCTGCACGCCGCGCGCGAAAACGCCCGGGCCGAGCGCTTCGTGCTGCCCCAGGAGAT GTTCGAAGGGCTGAACGCCACCTGGCTGGAACTACAGTCGCTCAGCTATGCGAGGCTGGTTGATTGGGGCTTCCGCGAGT TCTTCGAATGGGTCAAGGAGCGGTCCCACCAGTTCCTCGGCACCACCATCGGCACCATGCTTCAGACCGATGGCTTCCAT TTCACCCGGCTGGGCACCTTTATCGAGCGCGCCGACAACACCGCCCGCCTGCTCGATGTGAAATACCACGTGCTGATGCC CGACGAGAACCGCCTGGACGAGGCGGTGGATTACTACCAATGGGGGGCGGTGTTGCGCGCCATGTCGGCGCTGAAGGCCT ATCGCATGGTCTACCGCGACACCATCAAGCCCCGTCAGGTCATCGACCTTCTGACCCTGAAGCGCGAATTCCCGCGTTCG CTGCATCTGTGCTACGAGAACCTGCACGATTTGCTCGAACATCTGGCCCCCGGCGCCGAATGCACGCGGCTGACCGGCGA GATGCACGCCAAGCTGCGCTATGGCCGGATCCAGGACATCACCCGGCGCGGCCTGCACCGCTTCCTGACCGATTTCATCA CCCATAACGCCGCCGTCAGCGCCGAAATCGGCCGCACCTTCCATTTGGTCGCCGATATCGGGGTTCAAACGCCGGTTAAG GAGGCCAAAGAGGCCAAACGCGCCGATGACGGCGGCGAAGCTGAAGAGGCCGGCTCCGTGCAGCAGCAAAGACAATAG
Upstream 100 bases:
>100_bases GGCGGGCTGACCCGGGTGGCGCTTGAAAAAGACTCGCTGGTGGTCAATTCCTCGCAAGGGGGTGGCACCAAGGACACCTG GGTATTGGAGCGCTGATCCC
Downstream 100 bases:
>100_bases CGGGAAAAAGGATCGACTTCCCTCTCAGGACAGCATCGCCAGCCCGAGGCCGATGGTCAGGGCGAGGGCGGTTTCCAGCC CCGCCGTCCGCCCCAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLSRTADNLYWMTRYVERAENMARILDVSYRMSQLPRNGTDAAVEWEPALIISGQKPDFETRFEEITAGNVIAYMALDPE NPSSIVSTLHAARENARAERFVLPQEMFEGLNATWLELQSLSYARLVDWGFREFFEWVKERSHQFLGTTIGTMLQTDGFH FTRLGTFIERADNTARLLDVKYHVLMPDENRLDEAVDYYQWGAVLRAMSALKAYRMVYRDTIKPRQVIDLLTLKREFPRS LHLCYENLHDLLEHLAPGAECTRLTGEMHAKLRYGRIQDITRRGLHRFLTDFITHNAAVSAEIGRTFHLVADIGVQTPVK EAKEAKRADDGGEAEEAGSVQQQRQ
Sequences:
>Translated_345_residues MLSRTADNLYWMTRYVERAENMARILDVSYRMSQLPRNGTDAAVEWEPALIISGQKPDFETRFEEITAGNVIAYMALDPE NPSSIVSTLHAARENARAERFVLPQEMFEGLNATWLELQSLSYARLVDWGFREFFEWVKERSHQFLGTTIGTMLQTDGFH FTRLGTFIERADNTARLLDVKYHVLMPDENRLDEAVDYYQWGAVLRAMSALKAYRMVYRDTIKPRQVIDLLTLKREFPRS LHLCYENLHDLLEHLAPGAECTRLTGEMHAKLRYGRIQDITRRGLHRFLTDFITHNAAVSAEIGRTFHLVADIGVQTPVK EAKEAKRADDGGEAEEAGSVQQQRQ >Mature_345_residues MLSRTADNLYWMTRYVERAENMARILDVSYRMSQLPRNGTDAAVEWEPALIISGQKPDFETRFEEITAGNVIAYMALDPE NPSSIVSTLHAARENARAERFVLPQEMFEGLNATWLELQSLSYARLVDWGFREFFEWVKERSHQFLGTTIGTMLQTDGFH FTRLGTFIERADNTARLLDVKYHVLMPDENRLDEAVDYYQWGAVLRAMSALKAYRMVYRDTIKPRQVIDLLTLKREFPRS LHLCYENLHDLLEHLAPGAECTRLTGEMHAKLRYGRIQDITRRGLHRFLTDFITHNAAVSAEIGRTFHLVADIGVQTPVK EAKEAKRADDGGEAEEAGSVQQQRQ
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39732; Mature: 39732
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTADNLYWMTRYVERAENMARILDVSYRMSQLPRNGTDAAVEWEPALIISGQKPDFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCHH TRFEEITAGNVIAYMALDPENPSSIVSTLHAARENARAERFVLPQEMFEGLNATWLELQS HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHEECCHHHHCCCCHHHHHHHH LSYARLVDWGFREFFEWVKERSHQFLGTTIGTMLQTDGFHFTRLGTFIERADNTARLLDV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE KYHVLMPDENRLDEAVDYYQWGAVLRAMSALKAYRMVYRDTIKPRQVIDLLTLKREFPRS EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LHLCYENLHDLLEHLAPGAECTRLTGEMHAKLRYGRIQDITRRGLHRFLTDFITHNAAVS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AEIGRTFHLVADIGVQTPVKEAKEAKRADDGGEAEEAGSVQQQRQ HHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHCC >Mature Secondary Structure MLSRTADNLYWMTRYVERAENMARILDVSYRMSQLPRNGTDAAVEWEPALIISGQKPDFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCHH TRFEEITAGNVIAYMALDPENPSSIVSTLHAARENARAERFVLPQEMFEGLNATWLELQS HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHEECCHHHHCCCCHHHHHHHH LSYARLVDWGFREFFEWVKERSHQFLGTTIGTMLQTDGFHFTRLGTFIERADNTARLLDV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE KYHVLMPDENRLDEAVDYYQWGAVLRAMSALKAYRMVYRDTIKPRQVIDLLTLKREFPRS EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LHLCYENLHDLLEHLAPGAECTRLTGEMHAKLRYGRIQDITRRGLHRFLTDFITHNAAVS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AEIGRTFHLVADIGVQTPVKEAKEAKRADDGGEAEEAGSVQQQRQ HHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA