| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594706
Identifier: 83594706
GI number: 83594706
Start: 3893354
End: 3894124
Strand: Direct
Name: 83594706
Synonym: Rru_A3377
Alternate gene names: NA
Gene position: 3893354-3894124 (Clockwise)
Preceding gene: 83594702
Following gene: 83594708
Centisome position: 89.44
GC content: 67.96
Gene sequence:
>771_bases ATGTCCACCGATCTGGCGGAACGCGCGCCCAGCATACTCACGGACTTAGATGGCGCAACCATCGCCTATCACCGCACGCC CGGCAAGAGCCCCGGGGTGGTTTTCATTCACGGGTTCATGTCGAATATGGACGGCGGCAAGGCGCTTTTCGTTGAAAACT GGTGCCGCAACCATGGCCGCGCCTTCCTCCGCTTCGATCAGACCGGCCACGGGCTATCGTCGGGCGCCTTCGAAGAGGGT TCGATCGGCCGCTGGGCCGCCGATACCATCGCCGTGCTCGATGCCCTGACCAGCGGCCCCCAGGTGCTGATCGGCTCGTC GATGGGCGGCTGGCTGATGTTGTTGGCCGCCCTCGCCCGCCCCGACAGGGTGGCCGGGTTGATCGGCTTGGCCGCCGCCC CCGATTTCACCGAAGACCTCATCTGGGATCAAGCCTCGCCCGAGATCCGCGAGACCCTGCTGCGCGAGGGCCGCGTGGAA GAGGCCGGCAGCGGCGACGAGGGGCCGACGGTGTTCACCAAGCTGCTGATCGAGGATGGCCGGCGCCACCTGCTGCTGCG CGCTCCCCTGGCCATCGAGTGCCCGGTGCGGCTGATCCACGGCCTGGGCGATCAAAGCGTGCCCTGGGAAACCGCGCTGC GCCTGCAAAAAGCCCTGCGGGCGAGCGATGTGAGCGTCACCCTGGTCAAGGACGGCGAGCACCGGCTGTCACGCCCCCAG GACCTGGACCGCCTTGGCCGGACCCTGGAGGCGCTGCTCGCCCAGCTTTAG
Upstream 100 bases:
>100_bases CAATCCGCGGCGCCCTCCGAGGTCCCCGGTTGGTCGGGGCGCCCGAGGCTGTTACTTTGAGTGAGCACTGTTATTTCGGA ACCTGTCAGGGAAAAAGGCC
Downstream 100 bases:
>100_bases CCGTCGGCATACGTGAAATCTGATCCCCGCGCACCGCTCTAAGAGCTTGATAGTCAAGAAAATCGTCGTCGCGATCTGGT CCAGATCGCTCGGGATTTTC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEG SIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVE EAGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ DLDRLGRTLEALLAQL
Sequences:
>Translated_256_residues MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEG SIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVE EAGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ DLDRLGRTLEALLAQL >Mature_255_residues STDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGRAFLRFDQTGHGLSSGAFEEGS IGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALARPDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEE AGSGDEGPTVFTKLLIEDGRRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQD LDRLGRTLEALLAQL
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=247, Percent_Identity=38.8663967611336, Blast_Score=195, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27677; Mature: 27546
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGR CCCCHHHHCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCC AFLRFDQTGHGLSSGAFEEGSIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALAR EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCC PDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEEAGSGDEGPTVFTKLLIEDG CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC RRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ CCEEEEECCCEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCH DLDRLGRTLEALLAQL HHHHHHHHHHHHHHCC >Mature Secondary Structure STDLAERAPSILTDLDGATIAYHRTPGKSPGVVFIHGFMSNMDGGKALFVENWCRNHGR CCCHHHHCCHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCC AFLRFDQTGHGLSSGAFEEGSIGRWAADTIAVLDALTSGPQVLIGSSMGGWLMLLAALAR EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCC PDRVAGLIGLAAAPDFTEDLIWDQASPEIRETLLREGRVEEAGSGDEGPTVFTKLLIEDG CHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC RRHLLLRAPLAIECPVRLIHGLGDQSVPWETALRLQKALRASDVSVTLVKDGEHRLSRPQ CCEEEEECCCEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCH DLDRLGRTLEALLAQL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA