Click here to switch to the map view.

The map label for this gene is 83594708

Identifier: 83594708

GI number: 83594708

Start: 3895299

End: 3896153

Strand: Direct

Name: 83594708

Synonym: Rru_A3379

Alternate gene names: NA

Gene position: 3895299-3896153 (Clockwise)

Preceding gene: 83594706

Following gene: 83594709

Centisome position: 89.49

GC content: 72.98

Gene sequence:

>855_bases
ATGTTTCATTTTTCCCTGTCCCCCCGACGCACCGGCCGGGGGGCGCGACCCCGGGCCCGCCTTGGGGCGATGCTGGCGCT
GGCCTTTCTCGCCGGAGGGCTGACCGCCGGGCCGGGGAACGCCGCCGAGGGGGCCGGGGCGACGGCCGAGCGCCAATATT
GCGCCTGCATGGCCTTGGCGCGCTCGCGCCCCGATCAGGCTTTTGAAAAGGCCGGGCAATGGAAGGCCCTGGGCGGCGGC
GTGCCGGCCCGCCACTGCGAGGCGGTCGCCCTGCTCGGCCTCAAGGAATATGGCGAGGCGGCGCGGCGGCTCGAAGCCCT
GGCCGAGGATGTCAAACTGGCGCGGGGCCTGCGCGTCGATCTGCTGACCCAGGCCGGTCAGGCTTGGCTGGCGGTCGGCG
ATCTGTCGCGGGCCTATGCCAATCAGACCACGGCGCTTCAGCTTGCCGGGGCACGCGCCCAATCGGGGGCGCCGGCGCTG
TCCTCGGTTCTGCCCGATCTCTATATCGACCGCGCCGTCACTCTGGCCCAGGCCGGGCGCGATGACGAGGCGACCACCGA
TCTGACCAAGGCGCTGGCCCTTCAGCCCGCTTCGGTGACGGCTTTGGTTCTGCGCGCCAGCGCCCAGCGCCGCCAGGGGC
GGCTGACCGCCGCCCGCGCCGATGCCGAGGCGGCGGTGAAGCGCGCCCCCAATGACGCCGAAGCGCGGCTGGAGCGCGGC
GACGTTCGCCTTGCCCTCGGCGATCGTGACGGCGCGCGCGCCGACTGGTTGAAGGTGCTAGAACTCGCCCCGCGCGAGGG
GGCGGCCGATGCCGCCCGCGCCCGCATCGAGACCCTTGACCTCAAGGTTCGCTGA

Upstream 100 bases:

>100_bases
GCCAAGACCTCTGCGATAACCCCTCTTGCGCGGGGGGCTTCGGCGGGCGACTTTAGCGGTTCGAGGTTGCCGCCGACAAC
CGCCATGAAAGTCGTCCGCA

Downstream 100 bases:

>100_bases
TCCCTGCGGCCCGATATCGTCGTCGCCATGATGCCGCCACGACCGCCGGCCATAGACTTATGGACCTTCCCTCGGGCTTT
TCCTTTTGCCCAGGGCTTTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFHFSLSPRRTGRGARPRARLGAMLALAFLAGGLTAGPGNAAEGAGATAERQYCACMALARSRPDQAFEKAGQWKALGGG
VPARHCEAVALLGLKEYGEAARRLEALAEDVKLARGLRVDLLTQAGQAWLAVGDLSRAYANQTTALQLAGARAQSGAPAL
SSVLPDLYIDRAVTLAQAGRDDEATTDLTKALALQPASVTALVLRASAQRRQGRLTAARADAEAAVKRAPNDAEARLERG
DVRLALGDRDGARADWLKVLELAPREGAADAARARIETLDLKVR

Sequences:

>Translated_284_residues
MFHFSLSPRRTGRGARPRARLGAMLALAFLAGGLTAGPGNAAEGAGATAERQYCACMALARSRPDQAFEKAGQWKALGGG
VPARHCEAVALLGLKEYGEAARRLEALAEDVKLARGLRVDLLTQAGQAWLAVGDLSRAYANQTTALQLAGARAQSGAPAL
SSVLPDLYIDRAVTLAQAGRDDEATTDLTKALALQPASVTALVLRASAQRRQGRLTAARADAEAAVKRAPNDAEARLERG
DVRLALGDRDGARADWLKVLELAPREGAADAARARIETLDLKVR
>Mature_284_residues
MFHFSLSPRRTGRGARPRARLGAMLALAFLAGGLTAGPGNAAEGAGATAERQYCACMALARSRPDQAFEKAGQWKALGGG
VPARHCEAVALLGLKEYGEAARRLEALAEDVKLARGLRVDLLTQAGQAWLAVGDLSRAYANQTTALQLAGARAQSGAPAL
SSVLPDLYIDRAVTLAQAGRDDEATTDLTKALALQPASVTALVLRASAQRRQGRLTAARADAEAAVKRAPNDAEARLERG
DVRLALGDRDGARADWLKVLELAPREGAADAARARIETLDLKVR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29849; Mature: 29849

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHFSLSPRRTGRGARPRARLGAMLALAFLAGGLTAGPGNAAEGAGATAERQYCACMALA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RSRPDQAFEKAGQWKALGGGVPARHCEAVALLGLKEYGEAARRLEALAEDVKLARGLRVD
HCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLTQAGQAWLAVGDLSRAYANQTTALQLAGARAQSGAPALSSVLPDLYIDRAVTLAQAGR
HHHHCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDEATTDLTKALALQPASVTALVLRASAQRRQGRLTAARADAEAAVKRAPNDAEARLERG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCC
DVRLALGDRDGARADWLKVLELAPREGAADAARARIETLDLKVR
CEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MFHFSLSPRRTGRGARPRARLGAMLALAFLAGGLTAGPGNAAEGAGATAERQYCACMALA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RSRPDQAFEKAGQWKALGGGVPARHCEAVALLGLKEYGEAARRLEALAEDVKLARGLRVD
HCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LLTQAGQAWLAVGDLSRAYANQTTALQLAGARAQSGAPALSSVLPDLYIDRAVTLAQAGR
HHHHCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DDEATTDLTKALALQPASVTALVLRASAQRRQGRLTAARADAEAAVKRAPNDAEARLERG
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCC
DVRLALGDRDGARADWLKVLELAPREGAADAARARIETLDLKVR
CEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA