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The map label for this gene is rfaC [C]

Identifier: 83594704

GI number: 83594704

Start: 3891056

End: 3892009

Strand: Reverse

Name: rfaC [C]

Synonym: Rru_A3375

Alternate gene names: 83594704

Gene position: 3892009-3891056 (Counterclockwise)

Preceding gene: 83594705

Following gene: 83594703

Centisome position: 89.41

GC content: 68.66

Gene sequence:

>954_bases
ATGAGCGCCCGGCGCGCCATCCTGATCATCAAGCTTTCGGCCCTGGGCGATTTCGTCCAGGCCCTGGCCGCCTGCGCCAT
GATCCGGCGCGCCCATGCCGGTGATACCCTCACCGTGCTGACCACCGCGCCCTACCGGTCGCTGGCCGAGGCCTGCCCCT
ATTTCGACGAGGTGATGATCGACGAGCGGCCGAAGCTGACCAATCCCTTGGCCGTTCTGCGCTTGGCGCGCCGCCTGCGC
GCCCCGCGCTTCGACCGGGTCTATGATTTGCAGACGGCCGATCGCAGCGCCTTTTATTTCCGGCTGATGCGCCGGTGGGA
TGGGGGGCCGCAATGGTCGGGAATCGCCCCAGGCTGTTCCCACCCCCATGCCAATCCCCACCGCGACTCGATGCACACCC
TGGAGCGTCAGGCCGAGCAATTGGATATGGCCGGGATCACCCCGCCAGATCCCCTGCTTCCGCCCGATCTTTCCTGGGTG
CCGTCGCCTGATCGGGCGCTTCTTGACGCCCTTCCCGACCGTTTTGCCCTGCTGGTTCCCGGTGGCGCCCCCCATCGGCC
GCGCAAGCGCTGGCCGGCGGCGTCCTTTGGCGCCCTGGCCGGGCGCCTGGCGGCCTCCGGGGTCACGCCGGTTCTTCTCG
GCACGGCGGCGGAAGCGGCCGAAGCGGCGCAAATCCGCCAATCATGCCCCTTGGCGATCGATCTTCTCAACCGCACCAGC
TTGCTTGATATCGCCGGTCTCGGACGGCGGGCGGTCTGCGCCGTGGGCAATGATACCGGCCCGATGCATCTGCTGGCCGC
CGCCGGCTGCCCCTCGGTCGTGCTGTTTTCCGACTCGTCGGATCCGGCGCTCTGCGCCCCGCGCGGCCGCGCCGTCACCG
TGCTGCGCCGCGATGATCTGGCCCGGCTTCCGGTGGATCAAGTCTGGGAAACCATCGACCAAAGGCTGCTTTAG

Upstream 100 bases:

>100_bases
CCGCCGCTCGATCCGCCGCCCCTGCGAGCGGTGACGGAAGGCCAAGCCGAGGGCGCCGGAGTCGATGATCGGTGGGAGGG
GGCATGACGCTCTTTTGGCG

Downstream 100 bases:

>100_bases
AGAAAGACCTCGGTGGGAAGTCCACGCCCCGGGATGACGGCCGGGGAGCGCCATGTTATGAGGCGACTGGTACGGAGTCG
CAACGGGACGGTGGGAAGAG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase; Heptosyltransferase I; ADP-Heptose Of LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase I; Lipopolysaccharide Heptosyltransferase; Lipopolysaccharide Core Biosynthesis Protein; ADP-Heptose-LPS Heptosyltransferase II; Family 9 Glycosyl Transferase

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSARRAILIIKLSALGDFVQALAACAMIRRAHAGDTLTVLTTAPYRSLAEACPYFDEVMIDERPKLTNPLAVLRLARRLR
APRFDRVYDLQTADRSAFYFRLMRRWDGGPQWSGIAPGCSHPHANPHRDSMHTLERQAEQLDMAGITPPDPLLPPDLSWV
PSPDRALLDALPDRFALLVPGGAPHRPRKRWPAASFGALAGRLAASGVTPVLLGTAAEAAEAAQIRQSCPLAIDLLNRTS
LLDIAGLGRRAVCAVGNDTGPMHLLAAAGCPSVVLFSDSSDPALCAPRGRAVTVLRRDDLARLPVDQVWETIDQRLL

Sequences:

>Translated_317_residues
MSARRAILIIKLSALGDFVQALAACAMIRRAHAGDTLTVLTTAPYRSLAEACPYFDEVMIDERPKLTNPLAVLRLARRLR
APRFDRVYDLQTADRSAFYFRLMRRWDGGPQWSGIAPGCSHPHANPHRDSMHTLERQAEQLDMAGITPPDPLLPPDLSWV
PSPDRALLDALPDRFALLVPGGAPHRPRKRWPAASFGALAGRLAASGVTPVLLGTAAEAAEAAQIRQSCPLAIDLLNRTS
LLDIAGLGRRAVCAVGNDTGPMHLLAAAGCPSVVLFSDSSDPALCAPRGRAVTVLRRDDLARLPVDQVWETIDQRLL
>Mature_316_residues
SARRAILIIKLSALGDFVQALAACAMIRRAHAGDTLTVLTTAPYRSLAEACPYFDEVMIDERPKLTNPLAVLRLARRLRA
PRFDRVYDLQTADRSAFYFRLMRRWDGGPQWSGIAPGCSHPHANPHRDSMHTLERQAEQLDMAGITPPDPLLPPDLSWVP
SPDRALLDALPDRFALLVPGGAPHRPRKRWPAASFGALAGRLAASGVTPVLLGTAAEAAEAAQIRQSCPLAIDLLNRTSL
LDIAGLGRRAVCAVGNDTGPMHLLAAAGCPSVVLFSDSSDPALCAPRGRAVTVLRRDDLARLPVDQVWETIDQRLL

Specific function: Heptose Transfer To The Lipopolysaccharide Core. It Transfers The Innnermost Heptose To [4'-P](3-Deoxy-D-Manno- Octulosonic Acid)2-IVa. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34386; Mature: 34255

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARRAILIIKLSALGDFVQALAACAMIRRAHAGDTLTVLTTAPYRSLAEACPYFDEVMI
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHHHHH
DERPKLTNPLAVLRLARRLRAPRFDRVYDLQTADRSAFYFRLMRRWDGGPQWSGIAPGCS
CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
HPHANPHRDSMHTLERQAEQLDMAGITPPDPLLPPDLSWVPSPDRALLDALPDRFALLVP
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEC
GGAPHRPRKRWPAASFGALAGRLAASGVTPVLLGTAAEAAEAAQIRQSCPLAIDLLNRTS
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCEEEHHCCCH
LLDIAGLGRRAVCAVGNDTGPMHLLAAAGCPSVVLFSDSSDPALCAPRGRAVTVLRRDDL
HHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEECCCCCEEEEEECCCC
ARLPVDQVWETIDQRLL
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SARRAILIIKLSALGDFVQALAACAMIRRAHAGDTLTVLTTAPYRSLAEACPYFDEVMI
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCHHHHHH
DERPKLTNPLAVLRLARRLRAPRFDRVYDLQTADRSAFYFRLMRRWDGGPQWSGIAPGCS
CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
HPHANPHRDSMHTLERQAEQLDMAGITPPDPLLPPDLSWVPSPDRALLDALPDRFALLVP
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEC
GGAPHRPRKRWPAASFGALAGRLAASGVTPVLLGTAAEAAEAAQIRQSCPLAIDLLNRTS
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCEEEHHCCCH
LLDIAGLGRRAVCAVGNDTGPMHLLAAAGCPSVVLFSDSSDPALCAPRGRAVTVLRRDDL
HHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEECCCCCEEEEEECCCC
ARLPVDQVWETIDQRLL
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA