| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is yegS [C]
Identifier: 83594619
GI number: 83594619
Start: 3785905
End: 3786972
Strand: Direct
Name: yegS [C]
Synonym: Rru_A3289
Alternate gene names: 83594619
Gene position: 3785905-3786972 (Clockwise)
Preceding gene: 83594618
Following gene: 83594620
Centisome position: 86.98
GC content: 68.35
Gene sequence:
>1068_bases ATGGTGCTAGAGACCCAGCCTTTGGCGACGGCCGACGATGCCGGCGTTCAGGATTTCCCCCCAGCCTCCGAGCCGCGGCC GGCGATCCTGGTTCTGCTCAACCGCTCGGCCGGCAGCCTGATCGATAACGATCCCGATGAATTCGCCCACGCCCTGGGCC AGCGTCTTGAAGCCCTGGTCGCCGGGCGCGGGGGACGTGTCGATCTTCGCCTGCTCGAGGGCGGAGCGCTGGTCGATACC CTGGACTCGATGTTGAGCGCCCAAGCCGGCCGGCCGGCGGCCGTTCTCGTCGGCGGTGGCGACGGCACCGTCCTGGCCAT CGCCACCCGCCTGATCGGCAGTCGGATCCCCCTTGGCATCCTGCCGCTGGGCACCCTCAATCTGCTGGCCCGCGACCTGC TGATCCCGCTCGATATGGACGCCGCCTTGCCGGCGCTTCTTGATGGCGTCCAGGGCGAAATCGATGTCGCCCGGATCAAT GGCGCGCCCTTTCTCAACCTCACCATGCTCGGCATCAAGTCTTCGATCACCCGCATCCGCGAACGCAACCGGGGCAGCCT GTCGCCCTGGCACTGGCTGCGGATGGTCTGGCATGCCCTCAAGCTGTTCCGCCGCGCCCCGCGCGAGCCGATGATCCTGG AAACCCCCCAGGGAACCCGCAAGGTGCGCGCCCATGGGCTGGCGGTCGCCAATAACGGCTATGCCGATCGCCCGGGGTTG CTGGTCTCGCGCGACCATCTGAATGGCGGGGCCCTGGCCGTCTACATCGGTCGCCACCAAGGCCTTCTGTCGCTTGGTCG CCAATTGCTGCGTCTGGTCGGCGGCCGCTGGCAGCACGATCCCGAGCTTGATCACTTCACCACCAGCCATCTGGTCATCC ATACCAAGCGTCCGCAGATCCACACCACCGTCGATGGCGAGCCGCAGTTGCTGCCAACGCCCTTGACCTTCACCCTGGAG CGGGCGGCCCTAACGGTGCTCGCCCATGGCGAGGCGGCGCGGCGTCTGGCCGATCCCCGTCCCGGCCCTTTGGCGCGGCC GCCGGCGGTCGTGGCGGCGGCGACCTAA
Upstream 100 bases:
>100_bases GCCGCCGCCCGACCTGCGCCGCCGCCCGCCGCTTCGTGACTCCGCCCATCGCCGTCATGGAATTCGGCAAGCCGCCCGCT TGCCAGAGAGAGAGGCCGAC
Downstream 100 bases:
>100_bases GGCCATGCGGCGCATCGCCCACATCTCGGATCTTCACTTCGGCCGGGTCGACCCCGACGCGGTGATCGCCCTTGGCCAGG AACTGATCGCCCAGGCTCCC
Product: diacylglycerol kinase, catalytic region
Products: NA
Alternate protein names: Diacylglycerol Kinase; Sphingosine Kinase/Eukaryotic Diacylglycerol Kinase
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MVLETQPLATADDAGVQDFPPASEPRPAILVLLNRSAGSLIDNDPDEFAHALGQRLEALVAGRGGRVDLRLLEGGALVDT LDSMLSAQAGRPAAVLVGGGDGTVLAIATRLIGSRIPLGILPLGTLNLLARDLLIPLDMDAALPALLDGVQGEIDVARIN GAPFLNLTMLGIKSSITRIRERNRGSLSPWHWLRMVWHALKLFRRAPREPMILETPQGTRKVRAHGLAVANNGYADRPGL LVSRDHLNGGALAVYIGRHQGLLSLGRQLLRLVGGRWQHDPELDHFTTSHLVIHTKRPQIHTTVDGEPQLLPTPLTFTLE RAALTVLAHGEAARRLADPRPGPLARPPAVVAAAT
Sequences:
>Translated_355_residues MVLETQPLATADDAGVQDFPPASEPRPAILVLLNRSAGSLIDNDPDEFAHALGQRLEALVAGRGGRVDLRLLEGGALVDT LDSMLSAQAGRPAAVLVGGGDGTVLAIATRLIGSRIPLGILPLGTLNLLARDLLIPLDMDAALPALLDGVQGEIDVARIN GAPFLNLTMLGIKSSITRIRERNRGSLSPWHWLRMVWHALKLFRRAPREPMILETPQGTRKVRAHGLAVANNGYADRPGL LVSRDHLNGGALAVYIGRHQGLLSLGRQLLRLVGGRWQHDPELDHFTTSHLVIHTKRPQIHTTVDGEPQLLPTPLTFTLE RAALTVLAHGEAARRLADPRPGPLARPPAVVAAAT >Mature_355_residues MVLETQPLATADDAGVQDFPPASEPRPAILVLLNRSAGSLIDNDPDEFAHALGQRLEALVAGRGGRVDLRLLEGGALVDT LDSMLSAQAGRPAAVLVGGGDGTVLAIATRLIGSRIPLGILPLGTLNLLARDLLIPLDMDAALPALLDGVQGEIDVARIN GAPFLNLTMLGIKSSITRIRERNRGSLSPWHWLRMVWHALKLFRRAPREPMILETPQGTRKVRAHGLAVANNGYADRPGL LVSRDHLNGGALAVYIGRHQGLLSLGRQLLRLVGGRWQHDPELDHFTTSHLVIHTKRPQIHTTVDGEPQLLPTPLTFTLE RAALTVLAHGEAARRLADPRPGPLARPPAVVAAAT
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38031; Mature: 38031
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLETQPLATADDAGVQDFPPASEPRPAILVLLNRSAGSLIDNDPDEFAHALGQRLEALV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH AGRGGRVDLRLLEGGALVDTLDSMLSAQAGRPAAVLVGGGDGTVLAIATRLIGSRIPLGI CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEE LPLGTLNLLARDLLIPLDMDAALPALLDGVQGEIDVARINGAPFLNLTMLGIKSSITRIR ECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHH ERNRGSLSPWHWLRMVWHALKLFRRAPREPMILETPQGTRKVRAHGLAVANNGYADRPGL HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCEEEECCCCCCCCCE LVSRDHLNGGALAVYIGRHQGLLSLGRQLLRLVGGRWQHDPELDHFTTSHLVIHTKRPQI EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCEE HTTVDGEPQLLPTPLTFTLERAALTVLAHGEAARRLADPRPGPLARPPAVVAAAT EEECCCCCCEECCCHHEEEHHHEEEEEECCHHHHHHCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MVLETQPLATADDAGVQDFPPASEPRPAILVLLNRSAGSLIDNDPDEFAHALGQRLEALV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH AGRGGRVDLRLLEGGALVDTLDSMLSAQAGRPAAVLVGGGDGTVLAIATRLIGSRIPLGI CCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEE LPLGTLNLLARDLLIPLDMDAALPALLDGVQGEIDVARINGAPFLNLTMLGIKSSITRIR ECHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHH ERNRGSLSPWHWLRMVWHALKLFRRAPREPMILETPQGTRKVRAHGLAVANNGYADRPGL HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCEEEECCCCCCCCCE LVSRDHLNGGALAVYIGRHQGLLSLGRQLLRLVGGRWQHDPELDHFTTSHLVIHTKRPQI EEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCEE HTTVDGEPQLLPTPLTFTLERAALTVLAHGEAARRLADPRPGPLARPPAVVAAAT EEECCCCCCEECCCHHEEEHHHEEEEEECCHHHHHHCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA