| Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
|---|---|
| Accession | NC_007643 |
| Length | 4,352,825 |
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The map label for this gene is 83594620
Identifier: 83594620
GI number: 83594620
Start: 3786977
End: 3787846
Strand: Direct
Name: 83594620
Synonym: Rru_A3290
Alternate gene names: NA
Gene position: 3786977-3787846 (Clockwise)
Preceding gene: 83594619
Following gene: 83594621
Centisome position: 87.0
GC content: 67.82
Gene sequence:
>870_bases ATGCGGCGCATCGCCCACATCTCGGATCTTCACTTCGGCCGGGTCGACCCCGACGCGGTGATCGCCCTTGGCCAGGAACT GATCGCCCAGGCTCCCGATCTGGTCGTCGTCAGCGGCGACCTGACCCAACGCGCCCGCAGCCGGCAATTCCTCGATGCCC GGGCCTTCCTCGATTCCCTGAAACTGCCCATCCTGGTCGTTCCGGGCAATCACGACGTTCCCTGGCATAACCCGGTGCAG CGCTTCCTCGGCCCCCACGGCCGCTTTCGCAAGATGATCGGCAAGGACCTCAGCCCGGTGCTCCGCGATCCGGAAATGAC AGTGGCCGGGATCACCACCTCGCGCGCCCTGGTCCCCCATTGGAATTGGGCGAACGGCCGCATCTCGACCAAACGCGCCC GCCGGGTCGCCACCCTGCTTGCCGCCGAGCCGGCGGAAAAACTGCGCGTCGTCGTTACCCACCACCCCTTGGCTTTCGCG CCCAGTCCCACCGGCGGCGCCAGCCCGGATGGGACTCTGCCAACCTTCAACGCCGCCGGGGCCCTGCGCGCGCTTGGCGC GGCGCGGGTTGATCTGATGTTGAGCGGCCATATGCATGTCAGCCGCGCCGCCTGCCTGAGCTTCCCCGGCCCCAAGCCCG ACGGAACGCCGTGGACGGCCGTCGTCGTTCAGGCGGCCAGCGCGATTTCCACCCGCCTGCGCGGTGAACCCAACGCCTAT AATATGATTGAAACCTCGGCGAACGGCCTGGATGTCCACATCCGCGCCTGGACGGTGGGGGCGCAAGACTTCGCCACCGT CGCCACCCGCCACTTCGCCCGGATCGATGGCGTATGGGCGGCCAGTCAGCCACTGACCGGGCAATCGTAA
Upstream 100 bases:
>100_bases ACGGTGCTCGCCCATGGCGAGGCGGCGCGGCGTCTGGCCGATCCCCGTCCCGGCCCTTTGGCGCGGCCGCCGGCGGTCGT GGCGGCGGCGACCTAAGGCC
Downstream 100 bases:
>100_bases GCAAAGGCCGCCCCTTGGCTTCGGCCCGGGGCGCCCCATGTCAGACCCACAAGCGCAAAGACTTTTCCCGCCTGTGAGGA CTATAAAAAGGGGATCGGTC
Product: metallophosphoesterase
Products: nucleoside 5'-phosphate
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Calcineurin Superfamily Phosphohydrolase; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Transcriptional Regulator Icc Related Protein; Metallophosphoesterase Protein; Phosphodiesterase
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MRRIAHISDLHFGRVDPDAVIALGQELIAQAPDLVVVSGDLTQRARSRQFLDARAFLDSLKLPILVVPGNHDVPWHNPVQ RFLGPHGRFRKMIGKDLSPVLRDPEMTVAGITTSRALVPHWNWANGRISTKRARRVATLLAAEPAEKLRVVVTHHPLAFA PSPTGGASPDGTLPTFNAAGALRALGAARVDLMLSGHMHVSRAACLSFPGPKPDGTPWTAVVVQAASAISTRLRGEPNAY NMIETSANGLDVHIRAWTVGAQDFATVATRHFARIDGVWAASQPLTGQS
Sequences:
>Translated_289_residues MRRIAHISDLHFGRVDPDAVIALGQELIAQAPDLVVVSGDLTQRARSRQFLDARAFLDSLKLPILVVPGNHDVPWHNPVQ RFLGPHGRFRKMIGKDLSPVLRDPEMTVAGITTSRALVPHWNWANGRISTKRARRVATLLAAEPAEKLRVVVTHHPLAFA PSPTGGASPDGTLPTFNAAGALRALGAARVDLMLSGHMHVSRAACLSFPGPKPDGTPWTAVVVQAASAISTRLRGEPNAY NMIETSANGLDVHIRAWTVGAQDFATVATRHFARIDGVWAASQPLTGQS >Mature_289_residues MRRIAHISDLHFGRVDPDAVIALGQELIAQAPDLVVVSGDLTQRARSRQFLDARAFLDSLKLPILVVPGNHDVPWHNPVQ RFLGPHGRFRKMIGKDLSPVLRDPEMTVAGITTSRALVPHWNWANGRISTKRARRVATLLAAEPAEKLRVVVTHHPLAFA PSPTGGASPDGTLPTFNAAGALRALGAARVDLMLSGHMHVSRAACLSFPGPKPDGTPWTAVVVQAASAISTRLRGEPNAY NMIETSANGLDVHIRAWTVGAQDFATVATRHFARIDGVWAASQPLTGQS
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.4.17
Molecular weight: Translated: 31089; Mature: 31089
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIAHISDLHFGRVDPDAVIALGQELIAQAPDLVVVSGDLTQRARSRQFLDARAFLDSL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC KLPILVVPGNHDVPWHNPVQRFLGPHGRFRKMIGKDLSPVLRDPEMTVAGITTSRALVPH CCCEEEECCCCCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEEEECCEECCC WNWANGRISTKRARRVATLLAAEPAEKLRVVVTHHPLAFAPSPTGGASPDGTLPTFNAAG CCCCCCEECHHHHHHHHHHHHCCCHHHEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHH ALRALGAARVDLMLSGHMHVSRAACLSFPGPKPDGTPWTAVVVQAASAISTRLRGEPNAY HHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC NMIETSANGLDVHIRAWTVGAQDFATVATRHFARIDGVWAASQPLTGQS EEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCC >Mature Secondary Structure MRRIAHISDLHFGRVDPDAVIALGQELIAQAPDLVVVSGDLTQRARSRQFLDARAFLDSL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC KLPILVVPGNHDVPWHNPVQRFLGPHGRFRKMIGKDLSPVLRDPEMTVAGITTSRALVPH CCCEEEECCCCCCCCCCHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEEEECCEECCC WNWANGRISTKRARRVATLLAAEPAEKLRVVVTHHPLAFAPSPTGGASPDGTLPTFNAAG CCCCCCEECHHHHHHHHHHHHCCCHHHEEEEEEECCEEECCCCCCCCCCCCCCCCCCHHH ALRALGAARVDLMLSGHMHVSRAACLSFPGPKPDGTPWTAVVVQAASAISTRLRGEPNAY HHHHHHHHEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC NMIETSANGLDVHIRAWTVGAQDFATVATRHFARIDGVWAASQPLTGQS EEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nucleoside 3',5'-cyclic phosphate; H2O
Specific reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA