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The map label for this gene is pdtaS [H]

Identifier: 83594618

GI number: 83594618

Start: 3783855

End: 3785843

Strand: Direct

Name: pdtaS [H]

Synonym: Rru_A3288

Alternate gene names: 83594618

Gene position: 3783855-3785843 (Clockwise)

Preceding gene: 83594617

Following gene: 83594619

Centisome position: 86.93

GC content: 68.43

Gene sequence:

>1989_bases
ATGACGAGAACGGCGGAAAGCTTCCCCGCGGCGCATGGAGCTTCCGGGGAAGCCACGGAGTCCGCTTCGGTCTCTCCTCC
TCGCGCTCCCTCGGCACCGTCGGGCGCCACGCCCTCGGGGCCATCCCCTCCCGATCTCCCCGCCCGTGGCCGGAAAAGAC
AGGTCCTCGCCCGTTTGATCGGTCGCGGGGTTCCCTTGCGCCGTCAGGTGCTGGCGCTGCTGATTCTGGCCTTGCTGCCC
GGCGCCCTTTACGCCGGGCTGATGGCCCATAATTCCTATACCACCGACCGGGAACGCGCCCGCGAACACCTGCGCCAGCA
GGCGATCGCCGCCGCCGCCCAGGAAAGTGCCGCGATCACCGGCGCCGAGCAGGTGGGCAAGGCCTTGGCCCTATTACCGA
TCCTGACCGCCGACCCCGAGATCTGCCGCGAAAGCATCGACCGCATTCGCAGGGGCTTTCCCGCCTATCAGTCGATCTTC
GTCGTCGATACCGGCGGAGGGGTCATATGCTCCGCCATCCGCCCGGGGGTGGACATGCCGGCTTCGGTGGCCGAACGCCC
GTGGTTCAAGGCTCTGATGAGTCAAGGCCGGCCGGCGCGCGCCAGCGAAATCTCGCCGGTCATCCGCGATCAACCGGCCA
TCCTGGTGGCGATTCCCATTCCCGGACCCGACGGCCTGCCGCGCGGGGCCGTGGGCTTGGTTCCCCGGCTTGAAGGCGGG
GCGATGCCCGGCAAACGCTTTCGCGCCGATGGCGGCGAAGCCATCCTGGTCGACACCGAGGGCAAGCCCCTGCCCGGCTC
AGAATCGCTTGCCATGCTGCCCGACGCCGCCCTGCTGAGCGGGCTTCAGGCCACCAGCGACCGACCCGCCGTTTTCGATG
CGCCGGGCCGTGATGGCCAGCCCCGATCCTATGCCCTGGTGCCGCTTCCGCGCGGCTCGGTCAATCTGCTATTCGCCCGC
CCCGAAGCCTCGGCCTTCGACTGGGCGCAGCGCGATGTGGTGACCCGGCTGGTCGGACCGCTGGTCATGCTGTTGTTCAC
CCTTCTGGTCACCTGGGTGGCCATCGACCGGCTGGTGCTGCACTGGCTGGCCGAACTGCGCAAGACCACCCGTTCCTTTG
CCCGGGGCGACTTCGGCCAGCGTCCGAACCTCGCCGCCGCTCCCCAGGAGATTCAGGAACTGGGCGGCACGCTGTCGCGC
ATGGCCGACACCATCAAGGCCCGCGAGGCCGAGTTGGAACACACGCTCAGCCACCGCGAGGTGCTGCTGAAGGAAATTCA
CCACCGGGTGAAGAACAACCTTCAGATCGTGTCCAGCTTGCTGTCGCTCCAGCACCGCGCCCTTCCCCCCGGTCCGGCCC
GCTCGGCCCTGATGCAGGCCCAGACGCGGATCAATGCGCTGGCCACCGTTCACCGCAGCCTTTATGAGACCGAGGATCCC
AGCCTTGTCGACCTTGGCCGCTTCCTGCGGGAATTGGGGCAGTTGATCTATGACGGCATGGGCGGCCTCAACGGCATCGT
CGATCTCGATATCCGGATCGACGGCGCGGTGCTGGTCACCAGCGATCAGGCCGTGCCGTTATCCCTGGTGATGACCGAGG
CTTTGACCAACGCCCTGCGCCACGCCTATCCCGATGGTCGCAGCGGTGTCATCCGCGTCCGCCTTGGCGCGCTGGATGCA
GAAGAGACCCTTGCCGCCGCCGATGCCACGGAGGCGACGGGAACCCTCGGCCGACCCACCCATTGCTTGTCGGTGGAAGA
TGACGGGATCGGGCTGGCGGCCGAGGTTTCTCCGATTGATTCGGCGCAGGGCGAAGGCACCTGGACCACCATCGGACTGG
GTCGGCGCGGCATCGGGGCGACGCTGATCCGCAGCCTCGCCCGCCAAGCCGGCGGTCGGGTGACCATCGGCCTGCGCGAG
GGAGGGGGCACCAGGGTCAGCCTTGCTTTCGCCGCCGCCCGACCTGCGCCGCCGCCCGCCGCTTCGTGA

Upstream 100 bases:

>100_bases
AATGACGGTGGGCTTGACGGGTGCATGGGTTTGAGGTGACGGTTCCGCCCGGCAAACCGGGGCAGAGTCGTGGAATAGGG
CGTGTGGGGAAGGGGGAGCG

Downstream 100 bases:

>100_bases
CTCCGCCCATCGCCGTCATGGAATTCGGCAAGCCGCCCGCTTGCCAGAGAGAGAGGCCGACATGGTGCTAGAGACCCAGC
CTTTGGCGACGGCCGACGAT

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MTRTAESFPAAHGASGEATESASVSPPRAPSAPSGATPSGPSPPDLPARGRKRQVLARLIGRGVPLRRQVLALLILALLP
GALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAITGAEQVGKALALLPILTADPEICRESIDRIRRGFPAYQSIF
VVDTGGGVICSAIRPGVDMPASVAERPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLEGG
AMPGKRFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPGRDGQPRSYALVPLPRGSVNLLFAR
PEASAFDWAQRDVVTRLVGPLVMLLFTLLVTWVAIDRLVLHWLAELRKTTRSFARGDFGQRPNLAAAPQEIQELGGTLSR
MADTIKAREAELEHTLSHREVLLKEIHHRVKNNLQIVSSLLSLQHRALPPGPARSALMQAQTRINALATVHRSLYETEDP
SLVDLGRFLRELGQLIYDGMGGLNGIVDLDIRIDGAVLVTSDQAVPLSLVMTEALTNALRHAYPDGRSGVIRVRLGALDA
EETLAAADATEATGTLGRPTHCLSVEDDGIGLAAEVSPIDSAQGEGTWTTIGLGRRGIGATLIRSLARQAGGRVTIGLRE
GGGTRVSLAFAAARPAPPPAAS

Sequences:

>Translated_662_residues
MTRTAESFPAAHGASGEATESASVSPPRAPSAPSGATPSGPSPPDLPARGRKRQVLARLIGRGVPLRRQVLALLILALLP
GALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAITGAEQVGKALALLPILTADPEICRESIDRIRRGFPAYQSIF
VVDTGGGVICSAIRPGVDMPASVAERPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLEGG
AMPGKRFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPGRDGQPRSYALVPLPRGSVNLLFAR
PEASAFDWAQRDVVTRLVGPLVMLLFTLLVTWVAIDRLVLHWLAELRKTTRSFARGDFGQRPNLAAAPQEIQELGGTLSR
MADTIKAREAELEHTLSHREVLLKEIHHRVKNNLQIVSSLLSLQHRALPPGPARSALMQAQTRINALATVHRSLYETEDP
SLVDLGRFLRELGQLIYDGMGGLNGIVDLDIRIDGAVLVTSDQAVPLSLVMTEALTNALRHAYPDGRSGVIRVRLGALDA
EETLAAADATEATGTLGRPTHCLSVEDDGIGLAAEVSPIDSAQGEGTWTTIGLGRRGIGATLIRSLARQAGGRVTIGLRE
GGGTRVSLAFAAARPAPPPAAS
>Mature_661_residues
TRTAESFPAAHGASGEATESASVSPPRAPSAPSGATPSGPSPPDLPARGRKRQVLARLIGRGVPLRRQVLALLILALLPG
ALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAITGAEQVGKALALLPILTADPEICRESIDRIRRGFPAYQSIFV
VDTGGGVICSAIRPGVDMPASVAERPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLEGGA
MPGKRFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPGRDGQPRSYALVPLPRGSVNLLFARP
EASAFDWAQRDVVTRLVGPLVMLLFTLLVTWVAIDRLVLHWLAELRKTTRSFARGDFGQRPNLAAAPQEIQELGGTLSRM
ADTIKAREAELEHTLSHREVLLKEIHHRVKNNLQIVSSLLSLQHRALPPGPARSALMQAQTRINALATVHRSLYETEDPS
LVDLGRFLRELGQLIYDGMGGLNGIVDLDIRIDGAVLVTSDQAVPLSLVMTEALTNALRHAYPDGRSGVIRVRLGALDAE
ETLAAADATEATGTLGRPTHCLSVEDDGIGLAAEVSPIDSAQGEGTWTTIGLGRRGIGATLIRSLARQAGGRVTIGLREG
GGTRVSLAFAAARPAPPPAAS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 69908; Mature: 69777

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTAESFPAAHGASGEATESASVSPPRAPSAPSGATPSGPSPPDLPARGRKRQVLARLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GRGVPLRRQVLALLILALLPGALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAIT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GAEQVGKALALLPILTADPEICRESIDRIRRGFPAYQSIFVVDTGGGVICSAIRPGVDMP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCC
ASVAERPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLEGG
HHHHCCHHHHHHHHCCCCCCHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
AMPGKRFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPGRDGQ
CCCCCCEECCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEECCCCCCC
PRSYALVPLPRGSVNLLFARPEASAFDWAQRDVVTRLVGPLVMLLFTLLVTWVAIDRLVL
CCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWLAELRKTTRSFARGDFGQRPNLAAAPQEIQELGGTLSRMADTIKAREAELEHTLSHRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKEIHHRVKNNLQIVSSLLSLQHRALPPGPARSALMQAQTRINALATVHRSLYETEDP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLVDLGRFLRELGQLIYDGMGGLNGIVDLDIRIDGAVLVTSDQAVPLSLVMTEALTNALR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHH
HAYPDGRSGVIRVRLGALDAEETLAAADATEATGTLGRPTHCLSVEDDGIGLAAEVSPID
HCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC
SAQGEGTWTTIGLGRRGIGATLIRSLARQAGGRVTIGLREGGGTRVSLAFAAARPAPPPA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
AS
CC
>Mature Secondary Structure 
TRTAESFPAAHGASGEATESASVSPPRAPSAPSGATPSGPSPPDLPARGRKRQVLARLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GRGVPLRRQVLALLILALLPGALYAGLMAHNSYTTDRERAREHLRQQAIAAAAQESAAIT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GAEQVGKALALLPILTADPEICRESIDRIRRGFPAYQSIFVVDTGGGVICSAIRPGVDMP
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCC
ASVAERPWFKALMSQGRPARASEISPVIRDQPAILVAIPIPGPDGLPRGAVGLVPRLEGG
HHHHCCHHHHHHHHCCCCCCHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
AMPGKRFRADGGEAILVDTEGKPLPGSESLAMLPDAALLSGLQATSDRPAVFDAPGRDGQ
CCCCCCEECCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEECCCCCCC
PRSYALVPLPRGSVNLLFARPEASAFDWAQRDVVTRLVGPLVMLLFTLLVTWVAIDRLVL
CCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWLAELRKTTRSFARGDFGQRPNLAAAPQEIQELGGTLSRMADTIKAREAELEHTLSHRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKEIHHRVKNNLQIVSSLLSLQHRALPPGPARSALMQAQTRINALATVHRSLYETEDP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLVDLGRFLRELGQLIYDGMGGLNGIVDLDIRIDGAVLVTSDQAVPLSLVMTEALTNALR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHH
HAYPDGRSGVIRVRLGALDAEETLAAADATEATGTLGRPTHCLSVEDDGIGLAAEVSPID
HCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC
SAQGEGTWTTIGLGRRGIGATLIRSLARQAGGRVTIGLREGGGTRVSLAFAAARPAPPPA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]